RNA–Protein interactions for RNA: ENST00000533062.5

CHORDC1-208, Transcript of cysteine and histidine rich domain containing 1, humanhuman

TSL 4

Gene CHORDC1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHORDC1-208ENST00000533062 VPS8Q8N3P4 1428 aa18.25■□□□□ 0.51
CHORDC1-208ENST00000533062 RICTORQ6R327 1708 aa18.25■□□□□ 0.51
CHORDC1-208ENST00000533062 ZNF777Q9ULD5 760 aaPredicted RBP18.23■□□□□ 0.51
CHORDC1-208ENST00000533062 CDC42BPBQ9Y5S2 1711 aa18.23■□□□□ 0.51
CHORDC1-208ENST00000533062 POGZQ7Z3K3 1410 aa18.23■□□□□ 0.51
CHORDC1-208ENST00000533062 PREX2Q70Z35 1606 aa18.21■□□□□ 0.51
CHORDC1-208ENST00000533062 AFAP1Q8N556 730 aa18.21■□□□□ 0.51
CHORDC1-208ENST00000533062 YEATS2Q9ULM3 1422 aa18.21■□□□□ 0.51
CHORDC1-208ENST00000533062 GPATCH8Q9UKJ3 1502 aaKnown RBP18.2■□□□□ 0.5
CHORDC1-208ENST00000533062 CDC42BPAQ5VT25 1732 aa18.2■□□□□ 0.5
CHORDC1-208ENST00000533062 ARID4BQ4LE39 1312 aaPredicted RBP18.2■□□□□ 0.5
CHORDC1-208ENST00000533062 CCNB3Q8WWL7 1395 aa18.18■□□□□ 0.5
CHORDC1-208ENST00000533062 EHBP1L1Q8N3D4 1523 aa18.18■□□□□ 0.5
CHORDC1-208ENST00000533062 ARHGEF12Q9NZN5 1544 aa18.18■□□□□ 0.5
CHORDC1-208ENST00000533062 CFDP1Q9UEE9 299 aaPredicted RBP18.17■□□□□ 0.5
CHORDC1-208ENST00000533062 ZMYM4Q5VZL5 1548 aa18.17■□□□□ 0.5
CHORDC1-208ENST00000533062 ARHGEF40Q8TER5 1519 aa18.17■□□□□ 0.5
CHORDC1-208ENST00000533062 TIAM1Q13009 1591 aa18.17■□□□□ 0.5
CHORDC1-208ENST00000533062 MYT1LQ9UL68 1186 aa18.16■□□□□ 0.5
CHORDC1-208ENST00000533062 ZFYVE16Q7Z3T8 1539 aa18.16■□□□□ 0.5
CHORDC1-208ENST00000533062 TRAPPC8Q9Y2L5 1435 aa18.15■□□□□ 0.5
CHORDC1-208ENST00000533062 KANK4Q5T7N3 995 aaPredicted RBP18.15■□□□□ 0.5
CHORDC1-208ENST00000533062 ZNF518AQ6AHZ1 1483 aa18.14■□□□□ 0.5
CHORDC1-208ENST00000533062 ABCC1P33527 1531 aa18.14■□□□□ 0.49
CHORDC1-208ENST00000533062 HNRNPMP52272 730 aaKnown RBP eCLIP18.14■□□□□ 0.496e-6■■■■□ 20.3
CHORDC1-208ENST00000533062 MAGI2Q86UL8 1455 aa18.14■□□□□ 0.49
CHORDC1-208ENST00000533062 SAMD9LQ8IVG5 1584 aa18.13■□□□□ 0.49
CHORDC1-208ENST00000533062 ZNF644Q9H582 1327 aaPredicted RBP18.12■□□□□ 0.49
CHORDC1-208ENST00000533062 NCOA2Q15596 1464 aa18.12■□□□□ 0.49
CHORDC1-208ENST00000533062 LRRC9Q6ZRR7 1453 aa18.12■□□□□ 0.49
CHORDC1-208ENST00000533062 ITSN2Q9NZM3 1697 aa18.09■□□□□ 0.49
CHORDC1-208ENST00000533062 KDM5CP41229 1560 aa18.09■□□□□ 0.49
CHORDC1-208ENST00000533062 SYCP2Q9BX26 1530 aa18.09■□□□□ 0.49
CHORDC1-208ENST00000533062 MLECQ14165 292 aa18.09■□□□□ 0.49
CHORDC1-208ENST00000533062 SIGLEC1Q9BZZ2 1709 aa18.09■□□□□ 0.49
CHORDC1-208ENST00000533062 ATP10AO60312 1499 aa18.08■□□□□ 0.49
CHORDC1-208ENST00000533062 SUPT6HQ7KZ85 1726 aaKnown RBP18.08■□□□□ 0.48
CHORDC1-208ENST00000533062 HECW2Q9P2P5 1572 aa18.06■□□□□ 0.48
CHORDC1-208ENST00000533062 APLP2Q06481 763 aa18.06■□□□□ 0.48
CHORDC1-208ENST00000533062 BCORL1Q5H9F3 1711 aa18.05■□□□□ 0.48
CHORDC1-208ENST00000533062 MLH3Q9UHC1 1453 aa18.05■□□□□ 0.48
CHORDC1-208ENST00000533062 ADAMTSL3P82987 1691 aa18.05■□□□□ 0.48
CHORDC1-208ENST00000533062 MAP3K1Q13233 1512 aa18.04■□□□□ 0.48
CHORDC1-208ENST00000533062 C9orf84Q5VXU9 1444 aa18.04■□□□□ 0.48
CHORDC1-208ENST00000533062 KIAA1107Q9UPP5 1409 aa18.04■□□□□ 0.48
CHORDC1-208ENST00000533062 SPAG9O60271 1321 aaKnown RBP18.03■□□□□ 0.48
CHORDC1-208ENST00000533062 DIP2CQ9Y2E4 1556 aa18.03■□□□□ 0.48
CHORDC1-208ENST00000533062 PLEKHH2Q8IVE3 1493 aa18.02■□□□□ 0.48
CHORDC1-208ENST00000533062 PLPPR3Q6T4P5 718 aa18.02■□□□□ 0.48
CHORDC1-208ENST00000533062 ABCA6Q8N139 1617 aa18.01■□□□□ 0.47
CHORDC1-208ENST00000533062 MADDQ8WXG6 1647 aa18.01■□□□□ 0.47
CHORDC1-208ENST00000533062 KIDINS220Q9ULH0 1771 aa18■□□□□ 0.47
CHORDC1-208ENST00000533062 PTPRMP28827 1452 aa18■□□□□ 0.47
CHORDC1-208ENST00000533062 MBD5Q9P267 1494 aa18■□□□□ 0.47
CHORDC1-208ENST00000533062 CAMSAP2Q08AD1 1489 aa17.99■□□□□ 0.47
CHORDC1-208ENST00000533062 RIMS1Q86UR5 1692 aaKnown RBP17.96■□□□□ 0.47
CHORDC1-208ENST00000533062 ATP7AQ04656 1500 aa17.95■□□□□ 0.46
CHORDC1-208ENST00000533062 INO80Q9ULG1 1556 aaPredicted RBP17.93■□□□□ 0.46
CHORDC1-208ENST00000533062 MYOM3Q5VTT5 1437 aa17.93■□□□□ 0.46
CHORDC1-208ENST00000533062 REREQ9P2R6 1566 aa17.92■□□□□ 0.46
CHORDC1-208ENST00000533062 CCDC141Q6ZP82 1450 aa17.91■□□□□ 0.46
CHORDC1-208ENST00000533062 CEBPAP49715 358 aaPredicted RBP17.9■□□□□ 0.46
CHORDC1-208ENST00000533062 FER1L4A9Z1Z3 1794 aa17.89■□□□□ 0.45
CHORDC1-208ENST00000533062 PPARGC1BQ86YN6 1023 aaKnown RBP17.89■□□□□ 0.45
CHORDC1-208ENST00000533062 MIA2Q96PC5 1412 aa17.89■□□□□ 0.45
CHORDC1-208ENST00000533062 A2MP01023 1474 aa17.88■□□□□ 0.45
CHORDC1-208ENST00000533062 AGLP35573 1532 aa17.88■□□□□ 0.45
CHORDC1-208ENST00000533062 RSPH4AQ5TD94 716 aa17.88■□□□□ 0.45
CHORDC1-208ENST00000533062 TSPY4P0CV99 314 aa17.87■□□□□ 0.45
CHORDC1-208ENST00000533062 TSPY10P0CW01 314 aa17.87■□□□□ 0.45
CHORDC1-208ENST00000533062 RTEL1-TNFRSF6BF6WH68 1400 aa17.87■□□□□ 0.45
CHORDC1-208ENST00000533062 ARHGEF5Q12774 1597 aa17.86■□□□□ 0.45
CHORDC1-208ENST00000533062 ESF1Q9H501 851 aaKnown RBP17.85■□□□□ 0.45
CHORDC1-208ENST00000533062 GGT6Q6P531 493 aa17.84■□□□□ 0.45
CHORDC1-208ENST00000533062 PLXNC1O60486 1568 aa17.83■□□□□ 0.45
CHORDC1-208ENST00000533062 FGD6Q6ZV73 1430 aa17.83■□□□□ 0.45
CHORDC1-208ENST00000533062 DHX29Q7Z478 1369 aaKnown RBP17.82■□□□□ 0.44
CHORDC1-208ENST00000533062 ADGBQ8N7X0 1667 aa17.82■□□□□ 0.44
CHORDC1-208ENST00000533062 PTPN23Q9H3S7 1636 aa17.82■□□□□ 0.44
CHORDC1-208ENST00000533062 KIF3BO15066 747 aa17.79■□□□□ 0.44
CHORDC1-208ENST00000533062 HSPA2P54652 639 aa17.78■□□□□ 0.44
CHORDC1-208ENST00000533062 FAM50AQ14320 339 aaKnown RBP17.78■□□□□ 0.44
CHORDC1-208ENST00000533062 ABCC5O15440 1437 aa17.78■□□□□ 0.44
CHORDC1-208ENST00000533062 LMTK3Q96Q04 1460 aa17.77■□□□□ 0.44
CHORDC1-208ENST00000533062 TCOF1Q13428 1488 aaKnown RBP17.76■□□□□ 0.43
CHORDC1-208ENST00000533062 CHIC2Q9UKJ5 165 aa17.76■□□□□ 0.43
CHORDC1-208ENST00000533062 MAST1Q9Y2H9 1570 aa17.75■□□□□ 0.43
CHORDC1-208ENST00000533062 DAPK1P53355 1430 aa17.75■□□□□ 0.43
CHORDC1-208ENST00000533062 RRP7BPQ9NSQ0 103 aa17.75■□□□□ 0.43
CHORDC1-208ENST00000533062 C3P01024 1663 aa17.74■□□□□ 0.43
CHORDC1-208ENST00000533062 CNTLNQ9NXG0 1405 aa17.74■□□□□ 0.43
CHORDC1-208ENST00000533062 ZMYM3Q14202 1370 aa17.74■□□□□ 0.43
CHORDC1-208ENST00000533062 CLTCQ00610 1675 aaKnown RBP17.73■□□□□ 0.43
CHORDC1-208ENST00000533062 DNMT1P26358 1616 aaKnown RBP17.72■□□□□ 0.43
CHORDC1-208ENST00000533062 KIF15Q9NS87 1388 aa17.7■□□□□ 0.42
CHORDC1-208ENST00000533062 SHANK2Q9UPX8 1470 aa17.69■□□□□ 0.42
CHORDC1-208ENST00000533062 CROCC2H7BZ55 1655 aa17.69■□□□□ 0.42
CHORDC1-208ENST00000533062 PPP6R1Q9UPN7 881 aa17.69■□□□□ 0.42
CHORDC1-208ENST00000533062 WASHC2CQ9Y4E1 1318 aa17.69■□□□□ 0.42
CHORDC1-208ENST00000533062 UHRF1BP1Q6BDS2 1440 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms