RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 RALBP1Q15311 655 aa19.99■□□□□ 0.79
PCDHA3-202ENST00000532566 MYOM3Q5VTT5 1437 aa19.99■□□□□ 0.79
PCDHA3-202ENST00000532566 MAPK8IP3Q9UPT6 1336 aa19.98■□□□□ 0.79
PCDHA3-202ENST00000532566 GGT6Q6P531 493 aa19.98■□□□□ 0.79
PCDHA3-202ENST00000532566 CASKIN1Q8WXD9 1431 aa19.98■□□□□ 0.79
PCDHA3-202ENST00000532566 ARID4BQ4LE39 1312 aaPredicted RBP19.98■□□□□ 0.79
PCDHA3-202ENST00000532566 ERICH6BQ5W0A0 696 aa19.98■□□□□ 0.79
PCDHA3-202ENST00000532566 ANP32EQ9BTT0 268 aa19.98■□□□□ 0.79
PCDHA3-202ENST00000532566 CUX1P39880 1505 aa19.96■□□□□ 0.79
PCDHA3-202ENST00000532566 RRBP1Q9P2E9 1410 aaKnown RBP19.96■□□□□ 0.79
PCDHA3-202ENST00000532566 FTSJ3Q8IY81 847 aaKnown RBP19.94■□□□□ 0.78
PCDHA3-202ENST00000532566 PTPRGP23470 1445 aa19.93■□□□□ 0.78
PCDHA3-202ENST00000532566 SPAG9O60271 1321 aaKnown RBP19.93■□□□□ 0.78
PCDHA3-202ENST00000532566 KIF3BO15066 747 aa19.92■□□□□ 0.78
PCDHA3-202ENST00000532566 BECN1Q14457 450 aa19.92■□□□□ 0.78
PCDHA3-202ENST00000532566 UACAQ9BZF9 1416 aa19.91■□□□□ 0.78
PCDHA3-202ENST00000532566 BICRAQ9NZM4 1560 aa19.91■□□□□ 0.78
PCDHA3-202ENST00000532566 ANP32BQ92688 251 aaKnown RBP19.91■□□□□ 0.78
PCDHA3-202ENST00000532566 FRAT1Q92837 279 aaPredicted RBP19.91■□□□□ 0.78
PCDHA3-202ENST00000532566 MORC1Q86VD1 984 aa19.9■□□□□ 0.78
PCDHA3-202ENST00000532566 AQRO60306 1485 aaKnown RBP eCLIP19.9■□□□□ 0.78
PCDHA3-202ENST00000532566 U2SURPO15042 1029 aaKnown RBP19.9■□□□□ 0.78
PCDHA3-202ENST00000532566 FYCO1Q9BQS8 1478 aa19.9■□□□□ 0.78
PCDHA3-202ENST00000532566 C14orf37Q86TY3 774 aa19.89■□□□□ 0.77
PCDHA3-202ENST00000532566 RGS3P49796 1198 aa19.88■□□□□ 0.77
PCDHA3-202ENST00000532566 NCOA2Q15596 1464 aa19.88■□□□□ 0.77
PCDHA3-202ENST00000532566 SRPK2P78362 688 aaKnown RBP19.87■□□□□ 0.77
PCDHA3-202ENST00000532566 NLRP13Q86W25 1043 aa19.87■□□□□ 0.77
PCDHA3-202ENST00000532566 RBM19Q9Y4C8 960 aaKnown RBP19.87■□□□□ 0.77
PCDHA3-202ENST00000532566 CCDC144AA2RUR9 1427 aa19.86■□□□□ 0.77
PCDHA3-202ENST00000532566 ST20-MTHFSA0A0A6YYL1 179 aa19.86■□□□□ 0.77
PCDHA3-202ENST00000532566 NESP48681 1621 aa19.85■□□□□ 0.77
PCDHA3-202ENST00000532566 PRKRIP1Q9H875 184 aaPredicted RBP19.85■□□□□ 0.77
PCDHA3-202ENST00000532566 SAFB2Q14151 953 aaKnown RBP eCLIP19.85■□□□□ 0.77
PCDHA3-202ENST00000532566 RCAN3Q9UKA8 241 aa19.85■□□□□ 0.77
PCDHA3-202ENST00000532566 LAS1LQ9Y4W2 734 aaKnown RBP19.84■□□□□ 0.77
PCDHA3-202ENST00000532566 TOPBP1Q92547 1522 aa19.84■□□□□ 0.77
PCDHA3-202ENST00000532566 ZNF644Q9H582 1327 aaPredicted RBP19.84■□□□□ 0.77
PCDHA3-202ENST00000532566 EFCAB5A4FU69 1503 aa19.83■□□□□ 0.77
PCDHA3-202ENST00000532566 MS4A1P11836 297 aa19.83■□□□□ 0.77
PCDHA3-202ENST00000532566 PNNQ9H307 717 aaKnown RBP19.83■□□□□ 0.76
PCDHA3-202ENST00000532566 EIF3AQ14152 1382 aaKnown RBP19.83■□□□□ 0.76
PCDHA3-202ENST00000532566 POLA1P09884 1462 aaPredicted RBP19.82■□□□□ 0.76
PCDHA3-202ENST00000532566 GRIN2BQ13224 1484 aa19.82■□□□□ 0.76
PCDHA3-202ENST00000532566 ZBTB7CA1YPR0 619 aa19.81■□□□□ 0.76
PCDHA3-202ENST00000532566 NOP58Q9Y2X3 529 aaKnown RBP19.81■□□□□ 0.76
PCDHA3-202ENST00000532566 USP47Q96K76 1375 aa19.81■□□□□ 0.76
PCDHA3-202ENST00000532566 MLECQ14165 292 aa19.8■□□□□ 0.76
PCDHA3-202ENST00000532566 KIF15Q9NS87 1388 aa19.8■□□□□ 0.76
PCDHA3-202ENST00000532566 CC2D2AQ9P2K1 1620 aa19.8■□□□□ 0.76
PCDHA3-202ENST00000532566 STK26Q9P289 416 aa19.79■□□□□ 0.76
PCDHA3-202ENST00000532566 HDGFP51858 240 aaKnown RBP19.78■□□□□ 0.76
PCDHA3-202ENST00000532566 PLEKHG5O94827 1062 aa19.78■□□□□ 0.76
PCDHA3-202ENST00000532566 TSHZ2Q9NRE2 1034 aa19.77■□□□□ 0.76
PCDHA3-202ENST00000532566 TIAM1Q13009 1591 aa19.76■□□□□ 0.75
PCDHA3-202ENST00000532566 MYBBP1AQ9BQG0 1328 aaKnown RBP19.75■□□□□ 0.75
PCDHA3-202ENST00000532566 ARXQ96QS3 562 aa19.75■□□□□ 0.75
PCDHA3-202ENST00000532566 CHMP4BQ9H444 224 aaKnown RBP19.75■□□□□ 0.75
PCDHA3-202ENST00000532566 PDE3BQ13370 1112 aa19.75■□□□□ 0.75
PCDHA3-202ENST00000532566 PEG3Q9GZU2 1588 aa19.74■□□□□ 0.75
PCDHA3-202ENST00000532566 PRDM2Q13029 1718 aa19.73■□□□□ 0.75
PCDHA3-202ENST00000532566 HDGFL2Q7Z4V5 671 aaPredicted RBP19.73■□□□□ 0.75
PCDHA3-202ENST00000532566 DNMBPQ6XZF7 1577 aa19.72■□□□□ 0.75
PCDHA3-202ENST00000532566 WASHC2CQ9Y4E1 1318 aa19.72■□□□□ 0.75
PCDHA3-202ENST00000532566 ANKRD50Q9ULJ7 1429 aa19.7■□□□□ 0.74
PCDHA3-202ENST00000532566 U2AF1L5P0DN76 240 aaPredicted RBP19.7■□□□□ 0.74
PCDHA3-202ENST00000532566 U2AF1Q01081 240 aaKnown RBP eCLIP19.7■□□□□ 0.74
PCDHA3-202ENST00000532566 ZBED9Q6R2W3 1325 aa19.7■□□□□ 0.74
PCDHA3-202ENST00000532566 PANK3Q9H999 370 aa19.69■□□□□ 0.74
PCDHA3-202ENST00000532566 CCDC7Q96M83 1385 aa19.69■□□□□ 0.74
PCDHA3-202ENST00000532566 GOLGA2Q08379 1002 aa19.68■□□□□ 0.74
PCDHA3-202ENST00000532566 EHBP1L1Q8N3D4 1523 aa19.68■□□□□ 0.74
PCDHA3-202ENST00000532566 EIF5BO60841 1220 aaKnown RBP19.68■□□□□ 0.74
PCDHA3-202ENST00000532566 MRC2Q9UBG0 1479 aa19.67■□□□□ 0.74
PCDHA3-202ENST00000532566 KIF7Q2M1P5 1343 aa19.66■□□□□ 0.74
PCDHA3-202ENST00000532566 HFM1A2PYH4 1435 aa19.66■□□□□ 0.74
PCDHA3-202ENST00000532566 TCERG1O14776 1098 aaKnown RBP19.66■□□□□ 0.74
PCDHA3-202ENST00000532566 ABCA10Q8WWZ4 1543 aa19.65■□□□□ 0.74
PCDHA3-202ENST00000532566 MIA2Q96PC5 1412 aa19.65■□□□□ 0.74
PCDHA3-202ENST00000532566 CASC1Q6TDU7 716 aa19.64■□□□□ 0.73
PCDHA3-202ENST00000532566 IFT140Q96RY7 1462 aa19.63■□□□□ 0.73
PCDHA3-202ENST00000532566 GOLGA6L22H0YM25 854 aa19.63■□□□□ 0.73
PCDHA3-202ENST00000532566 TRAK1Q9UPV9 953 aa19.63■□□□□ 0.73
PCDHA3-202ENST00000532566 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.62■□□□□ 0.73
PCDHA3-202ENST00000532566 CNTLNQ9NXG0 1405 aa19.62■□□□□ 0.73
PCDHA3-202ENST00000532566 WASHC2AQ641Q2 1341 aa19.61■□□□□ 0.73
PCDHA3-202ENST00000532566 TERF2IPQ9NYB0 399 aa19.61■□□□□ 0.73
PCDHA3-202ENST00000532566 SOX12O15370 315 aa19.6■□□□□ 0.73
PCDHA3-202ENST00000532566 LMOD2Q6P5Q4 547 aa19.6■□□□□ 0.73
PCDHA3-202ENST00000532566 HAP1P54257 671 aaPredicted RBP19.6■□□□□ 0.73
PCDHA3-202ENST00000532566 CCDC146Q8IYE0 955 aa19.6■□□□□ 0.73
PCDHA3-202ENST00000532566 NUTM2DQ5VT03 806 aaPredicted RBP19.59■□□□□ 0.73
PCDHA3-202ENST00000532566 IPO8O15397 1037 aaKnown RBP19.59■□□□□ 0.73
PCDHA3-202ENST00000532566 UNC13AQ9UPW8 1703 aa19.57■□□□□ 0.72
PCDHA3-202ENST00000532566 SYNJ2O15056 1496 aa19.56■□□□□ 0.72
PCDHA3-202ENST00000532566 HECW1Q76N89 1606 aa19.56■□□□□ 0.72
PCDHA3-202ENST00000532566 TROQ12816 1431 aaPredicted RBP19.56■□□□□ 0.72
PCDHA3-202ENST00000532566 CALD1Q05682 793 aaKnown RBP19.56■□□□□ 0.72
PCDHA3-202ENST00000532566 STAC3Q96MF2 364 aa19.54■□□□□ 0.72
PCDHA3-202ENST00000532566 VGFO15240 615 aaPredicted RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms