RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 ARAP3Q8WWN8 1544 aa27.54■■■□□ 2
PPP1CA-208ENST00000532446 CD109Q6YHK3 1445 aa27.53■■■□□ 2
PPP1CA-208ENST00000532446 CFDP1Q9UEE9 299 aaPredicted RBP27.52■■■□□ 2
PPP1CA-208ENST00000532446 PTPN23Q9H3S7 1636 aa27.51■■□□□ 1.99
PPP1CA-208ENST00000532446 ARHGAP5Q13017 1502 aa27.5■■□□□ 1.99
PPP1CA-208ENST00000532446 TCOF1Q13428 1488 aaKnown RBP27.47■■□□□ 1.99
PPP1CA-208ENST00000532446 TRIM26Q12899 539 aaPredicted RBP27.46■■□□□ 1.99
PPP1CA-208ENST00000532446 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.45■■□□□ 1.99
PPP1CA-208ENST00000532446 TSPOAP1O95153 1857 aa27.45■■□□□ 1.98
PPP1CA-208ENST00000532446 EFCAB2Q5VUJ9 269 aa27.44■■□□□ 1.98
PPP1CA-208ENST00000532446 SAMD9LQ8IVG5 1584 aa27.43■■□□□ 1.98
PPP1CA-208ENST00000532446 ZNF644Q9H582 1327 aaPredicted RBP27.42■■□□□ 1.98
PPP1CA-208ENST00000532446 FANCAO15360 1455 aa27.42■■□□□ 1.98
PPP1CA-208ENST00000532446 CAMSAP2Q08AD1 1489 aa27.42■■□□□ 1.98
PPP1CA-208ENST00000532446 PPRC1Q5VV67 1664 aaKnown RBP27.41■■□□□ 1.98
PPP1CA-208ENST00000532446 FAM50AQ14320 339 aaKnown RBP27.41■■□□□ 1.98
PPP1CA-208ENST00000532446 ZNF777Q9ULD5 760 aaPredicted RBP27.41■■□□□ 1.98
PPP1CA-208ENST00000532446 CFAP74Q9C0B2 1584 aa27.39■■□□□ 1.97
PPP1CA-208ENST00000532446 PLEKHH2Q8IVE3 1493 aa27.36■■□□□ 1.97
PPP1CA-208ENST00000532446 NEO1Q92859 1461 aa27.35■■□□□ 1.97
PPP1CA-208ENST00000532446 ABCC1P33527 1531 aa27.34■■□□□ 1.97
PPP1CA-208ENST00000532446 AKNAQ7Z591 1439 aa27.33■■□□□ 1.97
PPP1CA-208ENST00000532446 KIAA1107Q9UPP5 1409 aa27.33■■□□□ 1.97
PPP1CA-208ENST00000532446 KDM6BO15054 1643 aa27.33■■□□□ 1.96
PPP1CA-208ENST00000532446 TEX14Q8IWB6 1497 aa27.33■■□□□ 1.96
PPP1CA-208ENST00000532446 SYCP2Q9BX26 1530 aa27.31■■□□□ 1.96
PPP1CA-208ENST00000532446 MBD5Q9P267 1494 aa27.3■■□□□ 1.96
PPP1CA-208ENST00000532446 DNMT1P26358 1616 aaKnown RBP27.3■■□□□ 1.96
PPP1CA-208ENST00000532446 ARHGEF12Q9NZN5 1544 aa27.3■■□□□ 1.96
PPP1CA-208ENST00000532446 ARHGEF5Q12774 1597 aa27.29■■□□□ 1.96
PPP1CA-208ENST00000532446 ADGRL1O94910 1474 aa27.29■■□□□ 1.96
PPP1CA-208ENST00000532446 HNRNPMP52272 730 aaKnown RBP eCLIP27.27■■□□□ 1.96
PPP1CA-208ENST00000532446 DAPK1P53355 1430 aa27.26■■□□□ 1.95
PPP1CA-208ENST00000532446 ABCC5O15440 1437 aa27.25■■□□□ 1.95
PPP1CA-208ENST00000532446 SCAPERQ9BY12 1400 aa27.25■■□□□ 1.95
PPP1CA-208ENST00000532446 CROCC2H7BZ55 1655 aa27.23■■□□□ 1.95
PPP1CA-208ENST00000532446 RSPH4AQ5TD94 716 aa27.23■■□□□ 1.95
PPP1CA-208ENST00000532446 CCDC141Q6ZP82 1450 aa27.22■■□□□ 1.95
PPP1CA-208ENST00000532446 ITGAEP38570 1179 aa27.22■■□□□ 1.95
PPP1CA-208ENST00000532446 PCGF6Q9BYE7 350 aa27.22■■□□□ 1.95
PPP1CA-208ENST00000532446 PTPRKQ15262 1439 aa27.22■■□□□ 1.95
PPP1CA-208ENST00000532446 TRAPPC8Q9Y2L5 1435 aa27.21■■□□□ 1.95
PPP1CA-208ENST00000532446 AEBP2Q6ZN18 517 aaPredicted RBP27.18■■□□□ 1.94
PPP1CA-208ENST00000532446 SHANK2Q9UPX8 1470 aa27.18■■□□□ 1.94
PPP1CA-208ENST00000532446 DENND4BO75064 1496 aaPredicted RBP27.16■■□□□ 1.94
PPP1CA-208ENST00000532446 POGZQ7Z3K3 1410 aa27.15■■□□□ 1.94
PPP1CA-208ENST00000532446 ZNF518AQ6AHZ1 1483 aa27.15■■□□□ 1.94
PPP1CA-208ENST00000532446 RICTORQ6R327 1708 aa27.14■■□□□ 1.94
PPP1CA-208ENST00000532446 AFAP1Q8N556 730 aa27.13■■□□□ 1.93
PPP1CA-208ENST00000532446 MAST1Q9Y2H9 1570 aa27.13■■□□□ 1.93
PPP1CA-208ENST00000532446 TSPY4P0CV99 314 aa27.13■■□□□ 1.93
PPP1CA-208ENST00000532446 TSPY10P0CW01 314 aa27.13■■□□□ 1.93
PPP1CA-208ENST00000532446 C9orf84Q5VXU9 1444 aa27.12■■□□□ 1.93
PPP1CA-208ENST00000532446 KDM5CP41229 1560 aa27.12■■□□□ 1.93
PPP1CA-208ENST00000532446 ADGBQ8N7X0 1667 aa27.11■■□□□ 1.93
PPP1CA-208ENST00000532446 CHIC2Q9UKJ5 165 aa27.1■■□□□ 1.93
PPP1CA-208ENST00000532446 FRMPD1Q5SYB0 1578 aa27.09■■□□□ 1.93
PPP1CA-208ENST00000532446 ADGRL2O95490 1459 aa27.09■■□□□ 1.93
PPP1CA-208ENST00000532446 COL17A1Q9UMD9 1497 aaPredicted RBP27.09■■□□□ 1.93
PPP1CA-208ENST00000532446 ROCK1Q13464 1354 aa27.08■■□□□ 1.93
PPP1CA-208ENST00000532446 RAPGEF3O95398 923 aa27.08■■□□□ 1.93
PPP1CA-208ENST00000532446 RTEL1-TNFRSF6BF6WH68 1400 aa27.06■■□□□ 1.92
PPP1CA-208ENST00000532446 INO80Q9ULG1 1556 aaPredicted RBP27.06■■□□□ 1.92
PPP1CA-208ENST00000532446 SPAG9O60271 1321 aaKnown RBP27.06■■□□□ 1.92
PPP1CA-208ENST00000532446 ZFYVE16Q7Z3T8 1539 aa27.05■■□□□ 1.92
PPP1CA-208ENST00000532446 NCOA1Q15788 1441 aa27.05■■□□□ 1.92
PPP1CA-208ENST00000532446 ATP7AQ04656 1500 aa27.03■■□□□ 1.92
PPP1CA-208ENST00000532446 ANKRD30AQ9BXX3 1397 aa27.03■■□□□ 1.92
PPP1CA-208ENST00000532446 MLH3Q9UHC1 1453 aa27.03■■□□□ 1.92
PPP1CA-208ENST00000532446 HECW2Q9P2P5 1572 aa27.02■■□□□ 1.92
PPP1CA-208ENST00000532446 KIDINS220Q9ULH0 1771 aa27.02■■□□□ 1.92
PPP1CA-208ENST00000532446 ZMYM4Q5VZL5 1548 aa27.02■■□□□ 1.92
PPP1CA-208ENST00000532446 PLXNC1O60486 1568 aa27.02■■□□□ 1.92
PPP1CA-208ENST00000532446 HFM1A2PYH4 1435 aa27.01■■□□□ 1.91
PPP1CA-208ENST00000532446 RRP7BPQ9NSQ0 103 aa27■■□□□ 1.91
PPP1CA-208ENST00000532446 GCC2Q8IWJ2 1684 aa26.99■■□□□ 1.91
PPP1CA-208ENST00000532446 NAIPQ13075 1403 aa26.98■■□□□ 1.91
PPP1CA-208ENST00000532446 KIF15Q9NS87 1388 aa26.95■■□□□ 1.9
PPP1CA-208ENST00000532446 SETD5Q9C0A6 1442 aa26.95■■□□□ 1.9
PPP1CA-208ENST00000532446 MAGI2Q86UL8 1455 aa26.94■■□□□ 1.9
PPP1CA-208ENST00000532446 MYT1LQ9UL68 1186 aa26.93■■□□□ 1.9
PPP1CA-208ENST00000532446 ABCA6Q8N139 1617 aa26.91■■□□□ 1.9
PPP1CA-208ENST00000532446 DUOX2Q9NRD8 1548 aa26.9■■□□□ 1.9
PPP1CA-208ENST00000532446 KDM4FA0A1W2PPD8 638 aa26.89■■□□□ 1.9
PPP1CA-208ENST00000532446 DIP2CQ9Y2E4 1556 aa26.88■■□□□ 1.89
PPP1CA-208ENST00000532446 YEATS2Q9ULM3 1422 aa26.88■■□□□ 1.89
PPP1CA-208ENST00000532446 ANKRD50Q9ULJ7 1429 aa26.87■■□□□ 1.89
PPP1CA-208ENST00000532446 RAB3GAP2Q9H2M9 1393 aa26.87■■□□□ 1.89
PPP1CA-208ENST00000532446 ARHGEF40Q8TER5 1519 aa26.83■■□□□ 1.89
PPP1CA-208ENST00000532446 DHX29Q7Z478 1369 aaKnown RBP26.83■■□□□ 1.89
PPP1CA-208ENST00000532446 A2MP01023 1474 aa26.82■■□□□ 1.88
PPP1CA-208ENST00000532446 HRCP23327 699 aa26.82■■□□□ 1.88
PPP1CA-208ENST00000532446 ERBINQ96RT1 1412 aa26.82■■□□□ 1.88
PPP1CA-208ENST00000532446 ATP10AO60312 1499 aa26.79■■□□□ 1.88
PPP1CA-208ENST00000532446 REREQ9P2R6 1566 aa26.78■■□□□ 1.88
PPP1CA-208ENST00000532446 EIF2AK4Q9P2K8 1649 aaKnown RBP26.77■■□□□ 1.88
PPP1CA-208ENST00000532446 BCORL1Q5H9F3 1711 aa26.73■■□□□ 1.87
PPP1CA-208ENST00000532446 ACIN1Q9UKV3 1341 aaKnown RBP26.72■■□□□ 1.87
PPP1CA-208ENST00000532446 UNC13BO14795 1591 aa26.7■■□□□ 1.86
PPP1CA-208ENST00000532446 DEPDC5O75140 1603 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms