RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 ARHGAP35Q9NRY4 1499 aa10.24□□□□□ -0.77
PTPRK-219ENST00000531050 GTF2E1P29083 439 aaPredicted RBP10.24□□□□□ -0.77
PTPRK-219ENST00000531050 BBXQ8WY36 941 aaPredicted RBP10.23□□□□□ -0.77
PTPRK-219ENST00000531050 SETD5Q9C0A6 1442 aa10.23□□□□□ -0.77
PTPRK-219ENST00000531050 FGD5Q6ZNL6 1462 aa10.23□□□□□ -0.77
PTPRK-219ENST00000531050 NAP1L2Q9ULW6 460 aaPredicted RBP10.23□□□□□ -0.77
PTPRK-219ENST00000531050 TPM2P07951 284 aa10.22□□□□□ -0.77
PTPRK-219ENST00000531050 MRS2Q9HD23 443 aa10.22□□□□□ -0.77
PTPRK-219ENST00000531050 ARID4BQ4LE39 1312 aaPredicted RBP10.21□□□□□ -0.77
PTPRK-219ENST00000531050 XRCC6P12956 609 aaKnown RBP eCLIP10.21□□□□□ -0.78
PTPRK-219ENST00000531050 PRKRIP1Q9H875 184 aaPredicted RBP10.21□□□□□ -0.78
PTPRK-219ENST00000531050 NCOA2Q15596 1464 aa10.2□□□□□ -0.78
PTPRK-219ENST00000531050 IGF1RP08069 1367 aa10.2□□□□□ -0.78
PTPRK-219ENST00000531050 CNTLNQ9NXG0 1405 aa10.19□□□□□ -0.78
PTPRK-219ENST00000531050 EXOC6Q8TAG9 804 aa10.19□□□□□ -0.78
PTPRK-219ENST00000531050 STAC3Q96MF2 364 aa10.19□□□□□ -0.78
PTPRK-219ENST00000531050 FHAD1B1AJZ9 1412 aa10.18□□□□□ -0.78
PTPRK-219ENST00000531050 CHMP4BQ9H444 224 aaKnown RBP10.18□□□□□ -0.78
PTPRK-219ENST00000531050 FANCD2Q9BXW9 1451 aa10.17□□□□□ -0.78
PTPRK-219ENST00000531050 FSD2A1L4K1 749 aa10.17□□□□□ -0.78
PTPRK-219ENST00000531050 PANK2Q9BZ23 570 aa10.17□□□□□ -0.78
PTPRK-219ENST00000531050 DNMBPQ6XZF7 1577 aa10.16□□□□□ -0.78
PTPRK-219ENST00000531050 ERBB4Q15303 1308 aa10.16□□□□□ -0.78
PTPRK-219ENST00000531050 SKAP1Q86WV1 359 aa10.16□□□□□ -0.78
PTPRK-219ENST00000531050 CARMIL1Q5VZK9 1371 aa10.16□□□□□ -0.78
PTPRK-219ENST00000531050 SMAP1Q8IYB5 467 aaPredicted RBP10.15□□□□□ -0.78
PTPRK-219ENST00000531050 TIAM1Q13009 1591 aa10.15□□□□□ -0.78
PTPRK-219ENST00000531050 IPO4Q8TEX9 1081 aaKnown RBP10.14□□□□□ -0.79
PTPRK-219ENST00000531050 MAP3K1Q13233 1512 aa10.14□□□□□ -0.79
PTPRK-219ENST00000531050 ESPNB1AK53 854 aa10.14□□□□□ -0.79
PTPRK-219ENST00000531050 RRP1P56182 461 aaKnown RBP10.14□□□□□ -0.79
PTPRK-219ENST00000531050 TONSLQ96HA7 1378 aa10.14□□□□□ -0.79
PTPRK-219ENST00000531050 CANXP27824 592 aaKnown RBP10.13□□□□□ -0.79
PTPRK-219ENST00000531050 ZHX1Q9UKY1 873 aaPredicted RBP10.13□□□□□ -0.79
PTPRK-219ENST00000531050 PAXIP1Q6ZW49 1069 aaPredicted RBP10.13□□□□□ -0.79
PTPRK-219ENST00000531050 GOLGA6L3A6NEY3 463 aa10.12□□□□□ -0.79
PTPRK-219ENST00000531050 CFAP43Q8NDM7 1665 aa10.12□□□□□ -0.79
PTPRK-219ENST00000531050 ABCA10Q8WWZ4 1543 aa10.12□□□□□ -0.79
PTPRK-219ENST00000531050 TOPBP1Q92547 1522 aa10.12□□□□□ -0.79
PTPRK-219ENST00000531050 KDM5BQ9UGL1 1544 aa10.12□□□□□ -0.79
PTPRK-219ENST00000531050 HSPA5P11021 654 aaKnown RBP10.12□□□□□ -0.79
PTPRK-219ENST00000531050 RIPK4P57078 832 aa10.12□□□□□ -0.79
PTPRK-219ENST00000531050 KLHL34Q8N239 644 aa10.12□□□□□ -0.79
PTPRK-219ENST00000531050 ARXQ96QS3 562 aa10.12□□□□□ -0.79
PTPRK-219ENST00000531050 RSPH4AQ5TD94 716 aa10.11□□□□□ -0.79
PTPRK-219ENST00000531050 POLA1P09884 1462 aaPredicted RBP10.11□□□□□ -0.79
PTPRK-219ENST00000531050 PCF11O94913 1555 aaKnown RBP10.1□□□□□ -0.79
PTPRK-219ENST00000531050 NESP48681 1621 aa10.1□□□□□ -0.79
PTPRK-219ENST00000531050 RAD54L2Q9Y4B4 1467 aa10.1□□□□□ -0.79
PTPRK-219ENST00000531050 KIAA1211Q6ZU35 1233 aa10.1□□□□□ -0.79
PTPRK-219ENST00000531050 CUL7Q14999 1698 aa10.1□□□□□ -0.79
PTPRK-219ENST00000531050 UTP14CQ5TAP6 766 aaKnown RBP10.09□□□□□ -0.79
PTPRK-219ENST00000531050 MAP7D2Q96T17 732 aa10.09□□□□□ -0.79
PTPRK-219ENST00000531050 CTTNBP2Q8WZ74 1663 aa10.09□□□□□ -0.79
PTPRK-219ENST00000531050 C8orf34Q49A92 452 aa10.08□□□□□ -0.8
PTPRK-219ENST00000531050 LRRC9Q6ZRR7 1453 aa10.08□□□□□ -0.8
PTPRK-219ENST00000531050 CNGB1Q14028 1251 aaPredicted RBP10.07□□□□□ -0.8
PTPRK-219ENST00000531050 TMEM51Q9NW97 253 aa10.07□□□□□ -0.8
PTPRK-219ENST00000531050 LAMC3Q9Y6N6 1575 aa10.07□□□□□ -0.8
PTPRK-219ENST00000531050 DMTNQ08495 405 aa10.07□□□□□ -0.8
PTPRK-219ENST00000531050 FOXD1Q16676 465 aa10.07□□□□□ -0.8
PTPRK-219ENST00000531050 SENP3Q9H4L4 574 aaPredicted RBP10.07□□□□□ -0.8
PTPRK-219ENST00000531050 CCDC7Q96M83 1385 aa10.07□□□□□ -0.8
PTPRK-219ENST00000531050 EFCAB5A4FU69 1503 aa10.06□□□□□ -0.8
PTPRK-219ENST00000531050 FAM161AQ3B820 660 aa10.06□□□□□ -0.8
PTPRK-219ENST00000531050 SENP3-EIF4A1A0A087X0R7 540 aa10.06□□□□□ -0.8
PTPRK-219ENST00000531050 PRDM10Q9NQV6 1147 aa10.06□□□□□ -0.8
PTPRK-219ENST00000531050 NCOA1Q15788 1441 aa10.06□□□□□ -0.8
PTPRK-219ENST00000531050 MRE11P49959 708 aa10.05□□□□□ -0.8
PTPRK-219ENST00000531050 URB2Q14146 1524 aaKnown RBP10.04□□□□□ -0.8
PTPRK-219ENST00000531050 NCLP19338 710 aaKnown RBP10.04□□□□□ -0.8
PTPRK-219ENST00000531050 TERF1P54274 439 aa10.04□□□□□ -0.8
PTPRK-219ENST00000531050 PPP4R3BQ5MIZ7 849 aa10.04□□□□□ -0.8
PTPRK-219ENST00000531050 ZNF830Q96NB3 372 aaPredicted RBP10.04□□□□□ -0.8
PTPRK-219ENST00000531050 MYH16Q9H6N6 1097 aa10.04□□□□□ -0.8
PTPRK-219ENST00000531050 FAM13BQ9NYF5 915 aa10.04□□□□□ -0.8
PTPRK-219ENST00000531050 RCAN3Q9UKA8 241 aa10.04□□□□□ -0.8
PTPRK-219ENST00000531050 FYCO1Q9BQS8 1478 aa10.03□□□□□ -0.8
PTPRK-219ENST00000531050 FHOD3Q2V2M9 1422 aa10.03□□□□□ -0.8
PTPRK-219ENST00000531050 ZNF326Q5BKZ1 582 aaKnown RBP10.03□□□□□ -0.8
PTPRK-219ENST00000531050 ANTXR1Q9H6X2 564 aa10.03□□□□□ -0.8
PTPRK-219ENST00000531050 ABCA5Q8WWZ7 1642 aa10.03□□□□□ -0.8
PTPRK-219ENST00000531050 PHLDB1Q86UU1 1377 aa10.03□□□□□ -0.8
PTPRK-219ENST00000531050 KDM2BQ8NHM5 1336 aa10.02□□□□□ -0.8
PTPRK-219ENST00000531050 OFD1O75665 1012 aa10.02□□□□□ -0.8
PTPRK-219ENST00000531050 ZSCAN20P17040 1043 aaPredicted RBP10.02□□□□□ -0.8
PTPRK-219ENST00000531050 EIF4G2P78344 907 aaKnown RBP eCLIP10.02□□□□□ -0.81
PTPRK-219ENST00000531050 GZF1Q9H116 711 aaPredicted RBP10.02□□□□□ -0.81
PTPRK-219ENST00000531050 AQRO60306 1485 aaKnown RBP eCLIP10.02□□□□□ -0.81
PTPRK-219ENST00000531050 GRPEL1Q9HAV7 217 aa10.01□□□□□ -0.81
PTPRK-219ENST00000531050 KTN1Q86UP2 1357 aaKnown RBP10.01□□□□□ -0.81
PTPRK-219ENST00000531050 SLKQ9H2G2 1235 aaPredicted RBP10.01□□□□□ -0.81
PTPRK-219ENST00000531050 MYOM3Q5VTT5 1437 aa10.01□□□□□ -0.81
PTPRK-219ENST00000531050 USP19O94966 1318 aa10□□□□□ -0.81
PTPRK-219ENST00000531050 CASKIN1Q8WXD9 1431 aa10□□□□□ -0.81
PTPRK-219ENST00000531050 P3H3Q8IVL6 736 aa9.99□□□□□ -0.81
PTPRK-219ENST00000531050 PLCD3Q8N3E9 789 aa9.99□□□□□ -0.81
PTPRK-219ENST00000531050 PNISRQ8TF01 805 aaKnown RBP9.99□□□□□ -0.81
PTPRK-219ENST00000531050 TRIM44Q96DX7 344 aaPredicted RBP9.99□□□□□ -0.81
PTPRK-219ENST00000531050 VGLL3A8MV65 326 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms