RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 CFAP43Q8NDM7 1665 aa23.89■■□□□ 1.42
CCS-206ENST00000530961 KIF14Q15058 1648 aa23.89■■□□□ 1.42
CCS-206ENST00000530961 TIAM1Q13009 1591 aa23.89■■□□□ 1.41
CCS-206ENST00000530961 LRRC9Q6ZRR7 1453 aa23.88■■□□□ 1.41
CCS-206ENST00000530961 EHBP1L1Q8N3D4 1523 aa23.87■■□□□ 1.41
CCS-206ENST00000530961 NEO1Q92859 1461 aa23.86■■□□□ 1.41
CCS-206ENST00000530961 CCNB3Q8WWL7 1395 aa23.84■■□□□ 1.41
CCS-206ENST00000530961 TTC37Q6PGP7 1564 aa23.83■■□□□ 1.41
CCS-206ENST00000530961 FANCAO15360 1455 aa23.83■■□□□ 1.41
CCS-206ENST00000530961 ARAP3Q8WWN8 1544 aa23.82■■□□□ 1.4
CCS-206ENST00000530961 CFDP1Q9UEE9 299 aaPredicted RBP23.81■■□□□ 1.4
CCS-206ENST00000530961 AKNAQ7Z591 1439 aa23.8■■□□□ 1.4
CCS-206ENST00000530961 GPATCH8Q9UKJ3 1502 aaKnown RBP23.79■■□□□ 1.4
CCS-206ENST00000530961 NCOA2Q15596 1464 aa23.78■■□□□ 1.4
CCS-206ENST00000530961 ADAMTSL3P82987 1691 aa23.76■■□□□ 1.39
CCS-206ENST00000530961 ARHGAP5Q13017 1502 aa23.74■■□□□ 1.39
CCS-206ENST00000530961 ZNF777Q9ULD5 760 aaPredicted RBP23.73■■□□□ 1.39
CCS-206ENST00000530961 RAPGEF3O95398 923 aa23.72■■□□□ 1.39
CCS-206ENST00000530961 SCAPERQ9BY12 1400 aa23.72■■□□□ 1.39
CCS-206ENST00000530961 DENND4BO75064 1496 aaPredicted RBP23.7■■□□□ 1.38
CCS-206ENST00000530961 HSPA2P54652 639 aa23.7■■□□□ 1.38
CCS-206ENST00000530961 CFAP74Q9C0B2 1584 aa23.67■■□□□ 1.38
CCS-206ENST00000530961 SUPT6HQ7KZ85 1726 aaKnown RBP23.66■■□□□ 1.38
CCS-206ENST00000530961 KIAA1107Q9UPP5 1409 aa23.66■■□□□ 1.38
CCS-206ENST00000530961 MYOM3Q5VTT5 1437 aa23.64■■□□□ 1.37
CCS-206ENST00000530961 MYO5CQ9NQX4 1742 aa23.64■■□□□ 1.37
CCS-206ENST00000530961 PLEKHH2Q8IVE3 1493 aa23.63■■□□□ 1.37
CCS-206ENST00000530961 PREX2Q70Z35 1606 aa23.63■■□□□ 1.37
CCS-206ENST00000530961 MIA2Q96PC5 1412 aa23.63■■□□□ 1.37
CCS-206ENST00000530961 ZNF644Q9H582 1327 aaPredicted RBP23.62■■□□□ 1.37
CCS-206ENST00000530961 AFAP1Q8N556 730 aa23.62■■□□□ 1.37
CCS-206ENST00000530961 POGZQ7Z3K3 1410 aa23.61■■□□□ 1.37
CCS-206ENST00000530961 HNRNPMP52272 730 aaKnown RBP eCLIP23.61■■□□□ 1.37
CCS-206ENST00000530961 RSPH4AQ5TD94 716 aa23.61■■□□□ 1.37
CCS-206ENST00000530961 PPARGC1BQ86YN6 1023 aaKnown RBP23.59■■□□□ 1.37
CCS-206ENST00000530961 MADDQ8WXG6 1647 aa23.59■■□□□ 1.37
CCS-206ENST00000530961 ARID4BQ4LE39 1312 aaPredicted RBP23.59■■□□□ 1.37
CCS-206ENST00000530961 ZNF518AQ6AHZ1 1483 aa23.58■■□□□ 1.37
CCS-206ENST00000530961 BCORL1Q5H9F3 1711 aa23.56■■□□□ 1.36
CCS-206ENST00000530961 ARHGEF12Q9NZN5 1544 aa23.56■■□□□ 1.36
CCS-206ENST00000530961 TRAPPC8Q9Y2L5 1435 aa23.56■■□□□ 1.36
CCS-206ENST00000530961 CDC42BPBQ9Y5S2 1711 aa23.56■■□□□ 1.36
CCS-206ENST00000530961 ABCC1P33527 1531 aa23.55■■□□□ 1.36
CCS-206ENST00000530961 CDC42BPAQ5VT25 1732 aa23.55■■□□□ 1.36
CCS-206ENST00000530961 MAGI2Q86UL8 1455 aa23.54■■□□□ 1.36
CCS-206ENST00000530961 SAMD9LQ8IVG5 1584 aa23.52■■□□□ 1.36
CCS-206ENST00000530961 FGD6Q6ZV73 1430 aa23.52■■□□□ 1.36
CCS-206ENST00000530961 ITSN2Q9NZM3 1697 aa23.52■■□□□ 1.36
CCS-206ENST00000530961 MBD5Q9P267 1494 aa23.52■■□□□ 1.36
CCS-206ENST00000530961 MYT1LQ9UL68 1186 aa23.51■■□□□ 1.35
CCS-206ENST00000530961 CAMSAP2Q08AD1 1489 aa23.5■■□□□ 1.35
CCS-206ENST00000530961 SPAG9O60271 1321 aaKnown RBP23.5■■□□□ 1.35
CCS-206ENST00000530961 SYCP2Q9BX26 1530 aa23.49■■□□□ 1.35
CCS-206ENST00000530961 ZMYM4Q5VZL5 1548 aa23.49■■□□□ 1.35
CCS-206ENST00000530961 FRMPD1Q5SYB0 1578 aa23.48■■□□□ 1.35
CCS-206ENST00000530961 TSPY4P0CV99 314 aa23.48■■□□□ 1.35
CCS-206ENST00000530961 TSPY10P0CW01 314 aa23.48■■□□□ 1.35
CCS-206ENST00000530961 MLH3Q9UHC1 1453 aa23.48■■□□□ 1.35
CCS-206ENST00000530961 DMRT2Q9Y5R5 561 aa23.47■■□□□ 1.35
CCS-206ENST00000530961 RIMS1Q86UR5 1692 aaKnown RBP23.46■■□□□ 1.35
CCS-206ENST00000530961 KDM5CP41229 1560 aa23.44■■□□□ 1.34
CCS-206ENST00000530961 FAM50AQ14320 339 aaKnown RBP23.44■■□□□ 1.34
CCS-206ENST00000530961 PLPPR3Q6T4P5 718 aa23.44■■□□□ 1.34
CCS-206ENST00000530961 TCOF1Q13428 1488 aaKnown RBP23.43■■□□□ 1.34
CCS-206ENST00000530961 YEATS2Q9ULM3 1422 aa23.43■■□□□ 1.34
CCS-206ENST00000530961 CCDC141Q6ZP82 1450 aa23.43■■□□□ 1.34
CCS-206ENST00000530961 RICTORQ6R327 1708 aa23.42■■□□□ 1.34
CCS-206ENST00000530961 RTEL1-TNFRSF6BF6WH68 1400 aa23.42■■□□□ 1.34
CCS-206ENST00000530961 ZFYVE16Q7Z3T8 1539 aa23.41■■□□□ 1.34
CCS-206ENST00000530961 ATP10AO60312 1499 aa23.39■■□□□ 1.34
CCS-206ENST00000530961 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.38■■□□□ 1.33
CCS-206ENST00000530961 ARHGEF5Q12774 1597 aa23.37■■□□□ 1.33
CCS-206ENST00000530961 PTPN23Q9H3S7 1636 aa23.36■■□□□ 1.33
CCS-206ENST00000530961 ABCC5O15440 1437 aa23.35■■□□□ 1.33
CCS-206ENST00000530961 ARHGEF40Q8TER5 1519 aa23.35■■□□□ 1.33
CCS-206ENST00000530961 C9orf84Q5VXU9 1444 aa23.34■■□□□ 1.33
CCS-206ENST00000530961 RRBP1Q9P2E9 1410 aaKnown RBP23.33■■□□□ 1.32
CCS-206ENST00000530961 DAPK1P53355 1430 aa23.32■■□□□ 1.32
CCS-206ENST00000530961 ATP7AQ04656 1500 aa23.3■■□□□ 1.32
CCS-206ENST00000530961 IQSEC2Q5JU85 1478 aa23.29■■□□□ 1.32
CCS-206ENST00000530961 SHANK2Q9UPX8 1470 aa23.28■■□□□ 1.32
CCS-206ENST00000530961 DHX29Q7Z478 1369 aaKnown RBP23.27■■□□□ 1.32
CCS-206ENST00000530961 CHIC2Q9UKJ5 165 aa23.26■■□□□ 1.31
CCS-206ENST00000530961 A2MP01023 1474 aa23.25■■□□□ 1.31
CCS-206ENST00000530961 INO80Q9ULG1 1556 aaPredicted RBP23.25■■□□□ 1.31
CCS-206ENST00000530961 DIP2CQ9Y2E4 1556 aa23.25■■□□□ 1.31
CCS-206ENST00000530961 ANKRD30AQ9BXX3 1397 aa23.25■■□□□ 1.31
CCS-206ENST00000530961 REREQ9P2R6 1566 aa23.23■■□□□ 1.31
CCS-206ENST00000530961 KIDINS220Q9ULH0 1771 aa23.23■■□□□ 1.31
CCS-206ENST00000530961 RRP7BPQ9NSQ0 103 aa23.23■■□□□ 1.31
CCS-206ENST00000530961 MAST1Q9Y2H9 1570 aa23.23■■□□□ 1.31
CCS-206ENST00000530961 ITGAEP38570 1179 aa23.22■■□□□ 1.31
CCS-206ENST00000530961 AGLP35573 1532 aa23.21■■□□□ 1.31
CCS-206ENST00000530961 DNMT1P26358 1616 aaKnown RBP23.21■■□□□ 1.31
CCS-206ENST00000530961 ABCA6Q8N139 1617 aa23.2■■□□□ 1.3
CCS-206ENST00000530961 NCOA1Q15788 1441 aa23.2■■□□□ 1.3
CCS-206ENST00000530961 MLECQ14165 292 aa23.2■■□□□ 1.3
CCS-206ENST00000530961 KIF15Q9NS87 1388 aa23.19■■□□□ 1.3
CCS-206ENST00000530961 PREX1Q8TCU6 1659 aa23.19■■□□□ 1.3
CCS-206ENST00000530961 PTPRTO14522 1441 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms