RNA–Protein interactions for RNA: ENST00000530958.5

ATM-215, Transcript of ATM serine/threonine kinase, humanhuman

TSL 2 BASIC

Gene ATM, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-215ENST00000530958 ANP32AP39687 249 aaKnown RBP9.98□□□□□ -0.81
ATM-215ENST00000530958 EIF5BO60841 1220 aaKnown RBP9.98□□□□□ -0.81
ATM-215ENST00000530958 ARXQ96QS3 562 aa9.98□□□□□ -0.81
ATM-215ENST00000530958 CFTRP13569 1480 aa9.97□□□□□ -0.81
ATM-215ENST00000530958 ARAP1Q96P48 1450 aa9.97□□□□□ -0.81
ATM-215ENST00000530958 PTPRGP23470 1445 aa9.97□□□□□ -0.81
ATM-215ENST00000530958 TIMELESSQ9UNS1 1208 aa9.96□□□□□ -0.82
ATM-215ENST00000530958 NUDCQ9Y266 331 aa9.95□□□□□ -0.82
ATM-215ENST00000530958 SPAG9O60271 1321 aaKnown RBP9.95□□□□□ -0.82
ATM-215ENST00000530958 NBR1Q14596 966 aa9.94□□□□□ -0.82
ATM-215ENST00000530958 ANKRD30AQ9BXX3 1397 aa9.94□□□□□ -0.82
ATM-215ENST00000530958 ANP32BQ92688 251 aaKnown RBP9.94□□□□□ -0.82
ATM-215ENST00000530958 DCAF8L1A6NGE4 600 aa9.93□□□□□ -0.82
ATM-215ENST00000530958 PNNQ9H307 717 aaKnown RBP9.93□□□□□ -0.82
ATM-215ENST00000530958 BICRAQ9NZM4 1560 aa9.93□□□□□ -0.82
ATM-215ENST00000530958 SRPK2P78362 688 aaKnown RBP9.93□□□□□ -0.82
ATM-215ENST00000530958 ST20-MTHFSA0A0A6YYL1 179 aa9.93□□□□□ -0.82
ATM-215ENST00000530958 U2SURPO15042 1029 aaKnown RBP9.93□□□□□ -0.82
ATM-215ENST00000530958 B4GALNT3Q6L9W6 998 aa9.93□□□□□ -0.82
ATM-215ENST00000530958 MAPK8IP3Q9UPT6 1336 aa9.92□□□□□ -0.82
ATM-215ENST00000530958 OSCARQ8IYS5 282 aa9.92□□□□□ -0.82
ATM-215ENST00000530958 KIF21BO75037 1637 aa9.92□□□□□ -0.82
ATM-215ENST00000530958 TMF1P82094 1093 aa9.92□□□□□ -0.82
ATM-215ENST00000530958 NUTM2FA1L443 756 aa9.91□□□□□ -0.82
ATM-215ENST00000530958 LAS1LQ9Y4W2 734 aaKnown RBP9.91□□□□□ -0.82
ATM-215ENST00000530958 AFAP1Q8N556 730 aa9.91□□□□□ -0.82
ATM-215ENST00000530958 CDK11BP21127 795 aaKnown RBP9.9□□□□□ -0.82
ATM-215ENST00000530958 PHF23Q9BUL5 403 aaPredicted RBP9.9□□□□□ -0.82
ATM-215ENST00000530958 WASHC2CQ9Y4E1 1318 aa9.9□□□□□ -0.83
ATM-215ENST00000530958 CCDC9Q9Y3X0 531 aaKnown RBP9.89□□□□□ -0.83
ATM-215ENST00000530958 CCDC18Q5T9S5 1454 aa9.89□□□□□ -0.83
ATM-215ENST00000530958 FRAT1Q92837 279 aaPredicted RBP9.89□□□□□ -0.83
ATM-215ENST00000530958 CC2D2AQ9P2K1 1620 aa9.89□□□□□ -0.83
ATM-215ENST00000530958 CUX1P39880 1505 aa9.89□□□□□ -0.83
ATM-215ENST00000530958 TRAK1Q9UPV9 953 aa9.88□□□□□ -0.83
ATM-215ENST00000530958 EID1Q9Y6B2 187 aa9.88□□□□□ -0.83
ATM-215ENST00000530958 ROCK2O75116 1388 aaKnown RBP9.88□□□□□ -0.83
ATM-215ENST00000530958 POLA1P09884 1462 aaPredicted RBP9.88□□□□□ -0.83
ATM-215ENST00000530958 PRXQ9BXM0 1461 aa9.87□□□□□ -0.83
ATM-215ENST00000530958 CHMP4BQ9H444 224 aaKnown RBP9.85□□□□□ -0.83
ATM-215ENST00000530958 TOPBP1Q92547 1522 aa9.85□□□□□ -0.83
ATM-215ENST00000530958 FGD6Q6ZV73 1430 aa9.85□□□□□ -0.83
ATM-215ENST00000530958 MORC1Q86VD1 984 aa9.85□□□□□ -0.83
ATM-215ENST00000530958 CASC1Q6TDU7 716 aa9.84□□□□□ -0.83
ATM-215ENST00000530958 RGS3P49796 1198 aa9.84□□□□□ -0.83
ATM-215ENST00000530958 HDGFL2Q7Z4V5 671 aaPredicted RBP9.83□□□□□ -0.84
ATM-215ENST00000530958 RTN4Q9NQC3 1192 aaKnown RBP9.83□□□□□ -0.84
ATM-215ENST00000530958 LRRC9Q6ZRR7 1453 aa9.83□□□□□ -0.84
ATM-215ENST00000530958 RSPH4AQ5TD94 716 aa9.83□□□□□ -0.84
ATM-215ENST00000530958 GOLGA2Q08379 1002 aa9.83□□□□□ -0.84
ATM-215ENST00000530958 MEX3CQ5U5Q3 659 aaKnown RBP9.83□□□□□ -0.84
ATM-215ENST00000530958 CCER2I3L3R5 266 aa9.82□□□□□ -0.84
ATM-215ENST00000530958 TMX4Q9H1E5 349 aaPredicted RBP9.82□□□□□ -0.84
ATM-215ENST00000530958 ANP32EQ9BTT0 268 aa9.81□□□□□ -0.84
ATM-215ENST00000530958 CSB-PGBD3P0DP91 1061 aa9.81□□□□□ -0.84
ATM-215ENST00000530958 MYOM3Q5VTT5 1437 aa9.81□□□□□ -0.84
ATM-215ENST00000530958 FTSJ3Q8IY81 847 aaKnown RBP9.81□□□□□ -0.84
ATM-215ENST00000530958 U2AF1L5P0DN76 240 aaPredicted RBP9.8□□□□□ -0.84
ATM-215ENST00000530958 U2AF1Q01081 240 aaKnown RBP eCLIP9.8□□□□□ -0.84
ATM-215ENST00000530958 MS4A1P11836 297 aa9.8□□□□□ -0.84
ATM-215ENST00000530958 CCDC146Q8IYE0 955 aa9.8□□□□□ -0.84
ATM-215ENST00000530958 FAM69CQ0P6D2 419 aa9.8□□□□□ -0.84
ATM-215ENST00000530958 GRIN2BQ13224 1484 aa9.8□□□□□ -0.84
ATM-215ENST00000530958 PRG4Q92954 1404 aaPredicted RBP9.8□□□□□ -0.84
ATM-215ENST00000530958 PANK3Q9H999 370 aa9.79□□□□□ -0.84
ATM-215ENST00000530958 NCOA2Q15596 1464 aa9.79□□□□□ -0.84
ATM-215ENST00000530958 KIF15Q9NS87 1388 aa9.79□□□□□ -0.84
ATM-215ENST00000530958 PAK3O75914 559 aaPredicted RBP9.79□□□□□ -0.84
ATM-215ENST00000530958 PRKRIP1Q9H875 184 aaPredicted RBP9.79□□□□□ -0.84
ATM-215ENST00000530958 CCDC144AA2RUR9 1427 aa9.78□□□□□ -0.84
ATM-215ENST00000530958 OS9Q13438 667 aaPredicted RBP9.78□□□□□ -0.84
ATM-215ENST00000530958 RTF1Q92541 710 aaKnown RBP9.78□□□□□ -0.84
ATM-215ENST00000530958 EIF3AQ14152 1382 aaKnown RBP9.78□□□□□ -0.84
ATM-215ENST00000530958 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.77□□□□□ -0.85
ATM-215ENST00000530958 TOP2BQ02880 1626 aa9.77□□□□□ -0.85
ATM-215ENST00000530958 NCLP19338 710 aaKnown RBP9.77□□□□□ -0.85
ATM-215ENST00000530958 CASKIN1Q8WXD9 1431 aa9.77□□□□□ -0.85
ATM-215ENST00000530958 TMEM132EQ6IEE7 984 aa9.77□□□□□ -0.85
ATM-215ENST00000530958 PPP4R2Q9NY27 417 aa9.77□□□□□ -0.85
ATM-215ENST00000530958 HMGXB3Q12766 1538 aa9.77□□□□□ -0.85
ATM-215ENST00000530958 KTN1Q86UP2 1357 aaKnown RBP9.77□□□□□ -0.85
ATM-215ENST00000530958 CHMP4AQ9BY43 222 aa9.76□□□□□ -0.85
ATM-215ENST00000530958 RRP7AQ9Y3A4 280 aaKnown RBP9.76□□□□□ -0.85
ATM-215ENST00000530958 NBPF1Q3BBV0 1214 aa9.76□□□□□ -0.85
ATM-215ENST00000530958 RAPGEF3O95398 923 aa9.75□□□□□ -0.85
ATM-215ENST00000530958 NBPF8Q3BBV2 869 aa9.75□□□□□ -0.85
ATM-215ENST00000530958 USP47Q96K76 1375 aa9.75□□□□□ -0.85
ATM-215ENST00000530958 ANKRD50Q9ULJ7 1429 aa9.75□□□□□ -0.85
ATM-215ENST00000530958 CLUAP1Q96AJ1 413 aa9.75□□□□□ -0.85
ATM-215ENST00000530958 MINK1Q8N4C8 1332 aaPredicted RBP9.74□□□□□ -0.85
ATM-215ENST00000530958 NLRP13Q86W25 1043 aa9.74□□□□□ -0.85
ATM-215ENST00000530958 SNAPC4Q5SXM2 1469 aa9.73□□□□□ -0.85
ATM-215ENST00000530958 CFAP70Q5T0N1 1121 aa9.73□□□□□ -0.85
ATM-215ENST00000530958 BECN1Q14457 450 aa9.72□□□□□ -0.85
ATM-215ENST00000530958 WASHC2AQ641Q2 1341 aa9.72□□□□□ -0.85
ATM-215ENST00000530958 ERICH3Q5RHP9 1530 aa9.72□□□□□ -0.85
ATM-215ENST00000530958 CALD1Q05682 793 aaKnown RBP9.72□□□□□ -0.85
ATM-215ENST00000530958 ZRSR1Q15695 479 aaKnown RBP9.72□□□□□ -0.85
ATM-215ENST00000530958 KIF7Q2M1P5 1343 aa9.72□□□□□ -0.85
ATM-215ENST00000530958 MRC2Q9UBG0 1479 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms