RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 FGD5Q6ZNL6 1462 aa10.85□□□□□ -0.67
CSDE1-214ENST00000530886 PRKRIP1Q9H875 184 aaPredicted RBP10.85□□□□□ -0.67
CSDE1-214ENST00000530886 IGF1RP08069 1367 aa10.85□□□□□ -0.67
CSDE1-214ENST00000530886 RANGAP1P46060 587 aaPredicted RBP10.85□□□□□ -0.67
CSDE1-214ENST00000530886 HMGXB3Q12766 1538 aa10.84□□□□□ -0.67
CSDE1-214ENST00000530886 DHX29Q7Z478 1369 aaKnown RBP10.83□□□□□ -0.68
CSDE1-214ENST00000530886 EFCAB5A4FU69 1503 aa10.83□□□□□ -0.68
CSDE1-214ENST00000530886 PDE4AP27815 886 aa10.83□□□□□ -0.68
CSDE1-214ENST00000530886 TEX14Q8IWB6 1497 aa10.83□□□□□ -0.68
CSDE1-214ENST00000530886 CASKIN1Q8WXD9 1431 aa10.83□□□□□ -0.68
CSDE1-214ENST00000530886 NUDCQ9Y266 331 aa10.83□□□□□ -0.68
CSDE1-214ENST00000530886 CCDC7Q96M83 1385 aa10.82□□□□□ -0.68
CSDE1-214ENST00000530886 CENPJQ9HC77 1338 aaPredicted RBP10.82□□□□□ -0.68
CSDE1-214ENST00000530886 TONSLQ96HA7 1378 aa10.81□□□□□ -0.68
CSDE1-214ENST00000530886 CFTRP13569 1480 aa10.81□□□□□ -0.68
CSDE1-214ENST00000530886 SAMD9Q5K651 1589 aa10.81□□□□□ -0.68
CSDE1-214ENST00000530886 HSP90AA2PQ14568 343 aaPredicted RBP10.81□□□□□ -0.68
CSDE1-214ENST00000530886 DCAF11Q8TEB1 546 aa10.8□□□□□ -0.68
CSDE1-214ENST00000530886 HSPA5P11021 654 aaKnown RBP10.79□□□□□ -0.68
CSDE1-214ENST00000530886 TCOF1Q13428 1488 aaKnown RBP10.79□□□□□ -0.68
CSDE1-214ENST00000530886 MBD5Q9P267 1494 aa10.79□□□□□ -0.68
CSDE1-214ENST00000530886 THOC2Q8NI27 1593 aaKnown RBP10.78□□□□□ -0.68
CSDE1-214ENST00000530886 RRAGDQ9NQL2 400 aaPredicted RBP10.78□□□□□ -0.68
CSDE1-214ENST00000530886 UGGT2Q9NYU1 1516 aa10.77□□□□□ -0.68
CSDE1-214ENST00000530886 SUPT6HQ7KZ85 1726 aaKnown RBP10.77□□□□□ -0.69
CSDE1-214ENST00000530886 KDM5CP41229 1560 aa10.77□□□□□ -0.69
CSDE1-214ENST00000530886 KIF21AQ7Z4S6 1674 aa10.76□□□□□ -0.69
CSDE1-214ENST00000530886 HSP90AA1P07900 732 aaKnown RBP10.76□□□□□ -0.69
CSDE1-214ENST00000530886 MAGI3Q5TCQ9 1506 aa10.76□□□□□ -0.69
CSDE1-214ENST00000530886 LRPPRCP42704 1394 aaKnown RBP10.75□□□□□ -0.69
CSDE1-214ENST00000530886 CLCN1P35523 988 aa10.75□□□□□ -0.69
CSDE1-214ENST00000530886 NPM2Q86SE8 214 aaKnown RBP10.74□□□□□ -0.69
CSDE1-214ENST00000530886 MYOM3Q5VTT5 1437 aa10.74□□□□□ -0.69
CSDE1-214ENST00000530886 GRIN2BQ13224 1484 aa10.74□□□□□ -0.69
CSDE1-214ENST00000530886 RPRD2Q5VT52 1461 aaKnown RBP10.74□□□□□ -0.69
CSDE1-214ENST00000530886 L1TD1Q5T7N2 865 aaKnown RBP10.73□□□□□ -0.69
CSDE1-214ENST00000530886 MRS2Q9HD23 443 aa10.73□□□□□ -0.69
CSDE1-214ENST00000530886 CC2D2AQ9P2K1 1620 aa10.73□□□□□ -0.69
CSDE1-214ENST00000530886 CALD1Q05682 793 aaKnown RBP10.73□□□□□ -0.69
CSDE1-214ENST00000530886 FMN1Q68DA7 1419 aa10.73□□□□□ -0.69
CSDE1-214ENST00000530886 AAMPQ13685 434 aa10.72□□□□□ -0.69
CSDE1-214ENST00000530886 KIF14Q15058 1648 aa10.71□□□□□ -0.69
CSDE1-214ENST00000530886 CUL7Q14999 1698 aa10.71□□□□□ -0.69
CSDE1-214ENST00000530886 FAM9BQ8IZU0 186 aa10.71□□□□□ -0.69
CSDE1-214ENST00000530886 KIF7Q2M1P5 1343 aa10.71□□□□□ -0.7
CSDE1-214ENST00000530886 FGD1P98174 961 aa10.71□□□□□ -0.7
CSDE1-214ENST00000530886 MIA2Q96PC5 1412 aa10.7□□□□□ -0.7
CSDE1-214ENST00000530886 FHOD3Q2V2M9 1422 aa10.7□□□□□ -0.7
CSDE1-214ENST00000530886 EHBP1L1Q8N3D4 1523 aa10.7□□□□□ -0.7
CSDE1-214ENST00000530886 CARMIL1Q5VZK9 1371 aa10.69□□□□□ -0.7
CSDE1-214ENST00000530886 FAM50AQ14320 339 aaKnown RBP10.69□□□□□ -0.7
CSDE1-214ENST00000530886 PRDM4Q9UKN5 801 aa10.69□□□□□ -0.7
CSDE1-214ENST00000530886 RBM10P98175 930 aaKnown RBP10.69□□□□□ -0.7
CSDE1-214ENST00000530886 PNNQ9H307 717 aaKnown RBP10.69□□□□□ -0.7
CSDE1-214ENST00000530886 PDCL3Q9H2J4 239 aa10.68□□□□□ -0.7
CSDE1-214ENST00000530886 RRP1P56182 461 aaKnown RBP10.67□□□□□ -0.7
CSDE1-214ENST00000530886 ANKRD30BQ9BXX2 1392 aa10.67□□□□□ -0.7
CSDE1-214ENST00000530886 FRAT2O75474 233 aaPredicted RBP10.67□□□□□ -0.7
CSDE1-214ENST00000530886 EIF4G2P78344 907 aaKnown RBP eCLIP10.67□□□□□ -0.7
CSDE1-214ENST00000530886 NBPF8Q3BBV2 869 aa10.67□□□□□ -0.7
CSDE1-214ENST00000530886 NAP1L5Q96NT1 182 aaPredicted RBP10.66□□□□□ -0.7
CSDE1-214ENST00000530886 ZMYM4Q5VZL5 1548 aa10.66□□□□□ -0.7
CSDE1-214ENST00000530886 TPM2P07951 284 aa10.66□□□□□ -0.7
CSDE1-214ENST00000530886 PNISRQ8TF01 805 aaKnown RBP10.66□□□□□ -0.7
CSDE1-214ENST00000530886 FSD2A1L4K1 749 aa10.63□□□□□ -0.71
CSDE1-214ENST00000530886 DNMT1P26358 1616 aaKnown RBP10.63□□□□□ -0.71
CSDE1-214ENST00000530886 L3MBTL2Q969R5 705 aa10.62□□□□□ -0.71
CSDE1-214ENST00000530886 GAPVD1Q14C86 1478 aa10.62□□□□□ -0.71
CSDE1-214ENST00000530886 EXOC6Q8TAG9 804 aa10.62□□□□□ -0.71
CSDE1-214ENST00000530886 ABCA10Q8WWZ4 1543 aa10.61□□□□□ -0.71
CSDE1-214ENST00000530886 ZNF608Q9ULD9 1512 aaPredicted RBP10.61□□□□□ -0.71
CSDE1-214ENST00000530886 KDM2BQ8NHM5 1336 aa10.61□□□□□ -0.71
CSDE1-214ENST00000530886 CROCC2H7BZ55 1655 aa10.59□□□□□ -0.71
CSDE1-214ENST00000530886 NLRP1Q9C000 1473 aa10.59□□□□□ -0.71
CSDE1-214ENST00000530886 INSRP06213 1382 aa10.59□□□□□ -0.71
CSDE1-214ENST00000530886 PDE4CQ08493 712 aa10.59□□□□□ -0.71
CSDE1-214ENST00000530886 PZPP20742 1482 aa10.58□□□□□ -0.72
CSDE1-214ENST00000530886 POGKQ9P215 609 aa10.58□□□□□ -0.72
CSDE1-214ENST00000530886 UHRF1BP1Q6BDS2 1440 aa10.58□□□□□ -0.72
CSDE1-214ENST00000530886 PDE3BQ13370 1112 aa10.58□□□□□ -0.72
CSDE1-214ENST00000530886 FAM161AQ3B820 660 aa10.58□□□□□ -0.72
CSDE1-214ENST00000530886 PABPN1Q86U42 306 aaKnown RBP eCLIP10.58□□□□□ -0.72
CSDE1-214ENST00000530886 TERF1P54274 439 aa10.57□□□□□ -0.72
CSDE1-214ENST00000530886 ARID4BQ4LE39 1312 aaPredicted RBP10.57□□□□□ -0.72
CSDE1-214ENST00000530886 KTN1Q86UP2 1357 aaKnown RBP10.57□□□□□ -0.72
CSDE1-214ENST00000530886 ADGBQ8N7X0 1667 aa10.57□□□□□ -0.72
CSDE1-214ENST00000530886 XRCC6P12956 609 aaKnown RBP eCLIP10.57□□□□□ -0.72
CSDE1-214ENST00000530886 BLMP54132 1417 aaPredicted RBP10.57□□□□□ -0.72
CSDE1-214ENST00000530886 C8orf34Q49A92 452 aa10.57□□□□□ -0.72
CSDE1-214ENST00000530886 RCAN3Q9UKA8 241 aa10.56□□□□□ -0.72
CSDE1-214ENST00000530886 MAP7D2Q96T17 732 aa10.56□□□□□ -0.72
CSDE1-214ENST00000530886 ISY1Q9ULR0 285 aaKnown RBP10.56□□□□□ -0.72
CSDE1-214ENST00000530886 CEP170Q5SW79 1584 aa10.56□□□□□ -0.72
CSDE1-214ENST00000530886 SLC4A3P48751 1232 aa10.56□□□□□ -0.72
CSDE1-214ENST00000530886 NESP48681 1621 aa10.55□□□□□ -0.72
CSDE1-214ENST00000530886 ROCK1Q13464 1354 aa10.55□□□□□ -0.72
CSDE1-214ENST00000530886 RALGAPBQ86X10 1494 aa10.55□□□□□ -0.72
CSDE1-214ENST00000530886 MPHOSPH9Q99550 1183 aa10.54□□□□□ -0.72
CSDE1-214ENST00000530886 BRD4O60885 1362 aaPredicted RBP10.54□□□□□ -0.72
CSDE1-214ENST00000530886 GOLGA6L3A6NEY3 463 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms