RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 ARHGAP5Q13017 1502 aa23.05■■□□□ 1.28
SRPRA-204ENST00000530680 ARAP3Q8WWN8 1544 aa23.05■■□□□ 1.28
SRPRA-204ENST00000530680 CCNB3Q8WWL7 1395 aa23.04■■□□□ 1.28
SRPRA-204ENST00000530680 NCOA2Q15596 1464 aa23.04■■□□□ 1.28
SRPRA-204ENST00000530680 KANK4Q5T7N3 995 aaPredicted RBP23.02■■□□□ 1.28
SRPRA-204ENST00000530680 CDC42BPBQ9Y5S2 1711 aa23.01■■□□□ 1.27
SRPRA-204ENST00000530680 FANCAO15360 1455 aa22.99■■□□□ 1.27
SRPRA-204ENST00000530680 PLCH2O75038 1416 aa22.99■■□□□ 1.27
SRPRA-204ENST00000530680 NEO1Q92859 1461 aa22.96■■□□□ 1.27
SRPRA-204ENST00000530680 PHLDB1Q86UU1 1377 aa22.95■■□□□ 1.26
SRPRA-204ENST00000530680 ADAMTSL3P82987 1691 aa22.94■■□□□ 1.26
SRPRA-204ENST00000530680 GPATCH8Q9UKJ3 1502 aaKnown RBP22.93■■□□□ 1.26
SRPRA-204ENST00000530680 EFCAB2Q5VUJ9 269 aa22.93■■□□□ 1.26
SRPRA-204ENST00000530680 PPARGC1BQ86YN6 1023 aaKnown RBP22.92■■□□□ 1.26
SRPRA-204ENST00000530680 CFDP1Q9UEE9 299 aaPredicted RBP22.91■■□□□ 1.26
SRPRA-204ENST00000530680 PTPRMP28827 1452 aa22.91■■□□□ 1.26
SRPRA-204ENST00000530680 ZNF777Q9ULD5 760 aaPredicted RBP22.9■■□□□ 1.26
SRPRA-204ENST00000530680 MYOM3Q5VTT5 1437 aa22.89■■□□□ 1.25
SRPRA-204ENST00000530680 AKNAQ7Z591 1439 aa22.89■■□□□ 1.25
SRPRA-204ENST00000530680 BCORL1Q5H9F3 1711 aa22.87■■□□□ 1.25
SRPRA-204ENST00000530680 SAMD9LQ8IVG5 1584 aa22.86■■□□□ 1.25
SRPRA-204ENST00000530680 FRMPD1Q5SYB0 1578 aa22.85■■□□□ 1.25
SRPRA-204ENST00000530680 RAPGEF3O95398 923 aa22.85■■□□□ 1.25
SRPRA-204ENST00000530680 FBXO41Q8TF61 875 aa22.85■■□□□ 1.25
SRPRA-204ENST00000530680 ABCC1P33527 1531 aa22.85■■□□□ 1.25
SRPRA-204ENST00000530680 PLEKHH2Q8IVE3 1493 aa22.84■■□□□ 1.25
SRPRA-204ENST00000530680 MADDQ8WXG6 1647 aa22.83■■□□□ 1.25
SRPRA-204ENST00000530680 DENND4BO75064 1496 aaPredicted RBP22.82■■□□□ 1.24
SRPRA-204ENST00000530680 CAMSAP2Q08AD1 1489 aa22.82■■□□□ 1.24
SRPRA-204ENST00000530680 SYCP2Q9BX26 1530 aa22.82■■□□□ 1.24
SRPRA-204ENST00000530680 PTPN23Q9H3S7 1636 aa22.81■■□□□ 1.24
SRPRA-204ENST00000530680 MIA2Q96PC5 1412 aa22.81■■□□□ 1.24
SRPRA-204ENST00000530680 SCAPERQ9BY12 1400 aa22.81■■□□□ 1.24
SRPRA-204ENST00000530680 RICTORQ6R327 1708 aa22.8■■□□□ 1.24
SRPRA-204ENST00000530680 FGD6Q6ZV73 1430 aa22.78■■□□□ 1.24
SRPRA-204ENST00000530680 ARID4BQ4LE39 1312 aaPredicted RBP22.78■■□□□ 1.24
SRPRA-204ENST00000530680 ARHGEF40Q8TER5 1519 aa22.77■■□□□ 1.24
SRPRA-204ENST00000530680 POGZQ7Z3K3 1410 aa22.76■■□□□ 1.23
SRPRA-204ENST00000530680 ZNF518AQ6AHZ1 1483 aa22.76■■□□□ 1.23
SRPRA-204ENST00000530680 RIMS1Q86UR5 1692 aaKnown RBP22.74■■□□□ 1.23
SRPRA-204ENST00000530680 LMTK3Q96Q04 1460 aa22.74■■□□□ 1.23
SRPRA-204ENST00000530680 MYT1LQ9UL68 1186 aa22.73■■□□□ 1.23
SRPRA-204ENST00000530680 KIAA1107Q9UPP5 1409 aa22.73■■□□□ 1.23
SRPRA-204ENST00000530680 ZNF644Q9H582 1327 aaPredicted RBP22.72■■□□□ 1.23
SRPRA-204ENST00000530680 FAM50AQ14320 339 aaKnown RBP22.7■■□□□ 1.22
SRPRA-204ENST00000530680 ARHGEF5Q12774 1597 aa22.69■■□□□ 1.22
SRPRA-204ENST00000530680 ZMYM4Q5VZL5 1548 aa22.69■■□□□ 1.22
SRPRA-204ENST00000530680 ARHGEF12Q9NZN5 1544 aa22.69■■□□□ 1.22
SRPRA-204ENST00000530680 CCDC141Q6ZP82 1450 aa22.69■■□□□ 1.22
SRPRA-204ENST00000530680 HNRNPMP52272 730 aaKnown RBP eCLIP22.69■■□□□ 1.22
SRPRA-204ENST00000530680 KDM5CP41229 1560 aa22.68■■□□□ 1.22
SRPRA-204ENST00000530680 TCOF1Q13428 1488 aaKnown RBP22.68■■□□□ 1.22
SRPRA-204ENST00000530680 TRAPPC8Q9Y2L5 1435 aa22.67■■□□□ 1.22
SRPRA-204ENST00000530680 CROCC2H7BZ55 1655 aa22.66■■□□□ 1.22
SRPRA-204ENST00000530680 ZFYVE16Q7Z3T8 1539 aa22.66■■□□□ 1.22
SRPRA-204ENST00000530680 DNMT1P26358 1616 aaKnown RBP22.64■■□□□ 1.22
SRPRA-204ENST00000530680 AFAP1Q8N556 730 aa22.63■■□□□ 1.21
SRPRA-204ENST00000530680 SPAG9O60271 1321 aaKnown RBP22.62■■□□□ 1.21
SRPRA-204ENST00000530680 MAGI2Q86UL8 1455 aa22.62■■□□□ 1.21
SRPRA-204ENST00000530680 MBD5Q9P267 1494 aa22.62■■□□□ 1.21
SRPRA-204ENST00000530680 RSPH4AQ5TD94 716 aa22.62■■□□□ 1.21
SRPRA-204ENST00000530680 ATP7AQ04656 1500 aa22.62■■□□□ 1.21
SRPRA-204ENST00000530680 SIGLEC1Q9BZZ2 1709 aa22.61■■□□□ 1.21
SRPRA-204ENST00000530680 INO80Q9ULG1 1556 aaPredicted RBP22.61■■□□□ 1.21
SRPRA-204ENST00000530680 RRBP1Q9P2E9 1410 aaKnown RBP22.59■■□□□ 1.21
SRPRA-204ENST00000530680 TSPY4P0CV99 314 aa22.59■■□□□ 1.21
SRPRA-204ENST00000530680 TSPY10P0CW01 314 aa22.59■■□□□ 1.21
SRPRA-204ENST00000530680 ADGBQ8N7X0 1667 aa22.58■■□□□ 1.21
SRPRA-204ENST00000530680 FER1L4A9Z1Z3 1794 aa22.58■■□□□ 1.21
SRPRA-204ENST00000530680 KIDINS220Q9ULH0 1771 aa22.58■■□□□ 1.21
SRPRA-204ENST00000530680 MLH3Q9UHC1 1453 aa22.58■■□□□ 1.2
SRPRA-204ENST00000530680 DAPK1P53355 1430 aa22.57■■□□□ 1.2
SRPRA-204ENST00000530680 YEATS2Q9ULM3 1422 aa22.57■■□□□ 1.2
SRPRA-204ENST00000530680 ABCA6Q8N139 1617 aa22.57■■□□□ 1.2
SRPRA-204ENST00000530680 SHANK2Q9UPX8 1470 aa22.56■■□□□ 1.2
SRPRA-204ENST00000530680 HSPA2P54652 639 aa22.56■■□□□ 1.2
SRPRA-204ENST00000530680 C9orf84Q5VXU9 1444 aa22.56■■□□□ 1.2
SRPRA-204ENST00000530680 MAST1Q9Y2H9 1570 aa22.55■■□□□ 1.2
SRPRA-204ENST00000530680 PLPPR3Q6T4P5 718 aa22.55■■□□□ 1.2
SRPRA-204ENST00000530680 DIP2CQ9Y2E4 1556 aa22.55■■□□□ 1.2
SRPRA-204ENST00000530680 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.53■■□□□ 1.2
SRPRA-204ENST00000530680 ITGAEP38570 1179 aa22.53■■□□□ 1.2
SRPRA-204ENST00000530680 ABCC5O15440 1437 aa22.52■■□□□ 1.2
SRPRA-204ENST00000530680 RTEL1-TNFRSF6BF6WH68 1400 aa22.51■■□□□ 1.19
SRPRA-204ENST00000530680 PLXNC1O60486 1568 aa22.5■■□□□ 1.19
SRPRA-204ENST00000530680 ATP10AO60312 1499 aa22.49■■□□□ 1.19
SRPRA-204ENST00000530680 MLECQ14165 292 aa22.48■■□□□ 1.19
SRPRA-204ENST00000530680 PREX1Q8TCU6 1659 aa22.46■■□□□ 1.19
SRPRA-204ENST00000530680 CHIC2Q9UKJ5 165 aa22.46■■□□□ 1.19
SRPRA-204ENST00000530680 ANKRD30AQ9BXX3 1397 aa22.45■■□□□ 1.18
SRPRA-204ENST00000530680 REREQ9P2R6 1566 aa22.45■■□□□ 1.18
SRPRA-204ENST00000530680 CERKQ8TCT0 537 aa22.44■■□□□ 1.18
SRPRA-204ENST00000530680 A2MP01023 1474 aa22.43■■□□□ 1.18
SRPRA-204ENST00000530680 KIF15Q9NS87 1388 aa22.41■■□□□ 1.18
SRPRA-204ENST00000530680 ADGRL2O95490 1459 aa22.41■■□□□ 1.18
SRPRA-204ENST00000530680 DUOX2Q9NRD8 1548 aa22.4■■□□□ 1.18
SRPRA-204ENST00000530680 RRP7BPQ9NSQ0 103 aa22.38■■□□□ 1.17
SRPRA-204ENST00000530680 EIF2AK4Q9P2K8 1649 aaKnown RBP22.36■■□□□ 1.17
SRPRA-204ENST00000530680 PTPRKQ15262 1439 aa22.36■■□□□ 1.17
SRPRA-204ENST00000530680 NCOA1Q15788 1441 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms