RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 PTPN23Q9H3S7 1636 aa16.32■□□□□ 0.2
SOX6-213ENST00000530378 ARHGAP5Q13017 1502 aa16.31■□□□□ 0.2
SOX6-213ENST00000530378 FAM50AQ14320 339 aaKnown RBP16.31■□□□□ 0.2
SOX6-213ENST00000530378 ZNF777Q9ULD5 760 aaPredicted RBP16.31■□□□□ 0.2
SOX6-213ENST00000530378 RRBP1Q9P2E9 1410 aaKnown RBP16.29■□□□□ 0.2
SOX6-213ENST00000530378 FAM69CQ0P6D2 419 aa16.29■□□□□ 0.2
SOX6-213ENST00000530378 TRIM26Q12899 539 aaPredicted RBP16.29■□□□□ 0.2
SOX6-213ENST00000530378 CFDP1Q9UEE9 299 aaPredicted RBP16.29■□□□□ 0.2
SOX6-213ENST00000530378 ZNF644Q9H582 1327 aaPredicted RBP16.28■□□□□ 0.2
SOX6-213ENST00000530378 MAP3K4Q9Y6R4 1608 aa16.27■□□□□ 0.2
SOX6-213ENST00000530378 ITGAEP38570 1179 aa16.27■□□□□ 0.2
SOX6-213ENST00000530378 PCGF6Q9BYE7 350 aa16.27■□□□□ 0.2
SOX6-213ENST00000530378 CAMSAP2Q08AD1 1489 aa16.26■□□□□ 0.19
SOX6-213ENST00000530378 SAMD9LQ8IVG5 1584 aa16.26■□□□□ 0.19
SOX6-213ENST00000530378 GLI2P10070 1586 aa16.25■□□□□ 0.19
SOX6-213ENST00000530378 CD109Q6YHK3 1445 aa16.25■□□□□ 0.19
SOX6-213ENST00000530378 PLCH2O75038 1416 aa16.25■□□□□ 0.19
SOX6-213ENST00000530378 MIA2Q96PC5 1412 aa16.23■□□□□ 0.19
SOX6-213ENST00000530378 TCOF1Q13428 1488 aaKnown RBP16.22■□□□□ 0.19
SOX6-213ENST00000530378 PPRC1Q5VV67 1664 aaKnown RBP16.22■□□□□ 0.19
SOX6-213ENST00000530378 FANCAO15360 1455 aa16.21■□□□□ 0.19
SOX6-213ENST00000530378 SYCP2Q9BX26 1530 aa16.21■□□□□ 0.19
SOX6-213ENST00000530378 ARAP3Q8WWN8 1544 aa16.19■□□□□ 0.18
SOX6-213ENST00000530378 EFCAB2Q5VUJ9 269 aa16.18■□□□□ 0.18
SOX6-213ENST00000530378 ABCC1P33527 1531 aa16.18■□□□□ 0.18
SOX6-213ENST00000530378 DNMT1P26358 1616 aaKnown RBP16.17■□□□□ 0.18
SOX6-213ENST00000530378 CFAP74Q9C0B2 1584 aa16.17■□□□□ 0.18
SOX6-213ENST00000530378 HNRNPMP52272 730 aaKnown RBP eCLIP16.17■□□□□ 0.18
SOX6-213ENST00000530378 ARHGEF12Q9NZN5 1544 aa16.16■□□□□ 0.18
SOX6-213ENST00000530378 CROCC2H7BZ55 1655 aa16.16■□□□□ 0.18
SOX6-213ENST00000530378 ADGRL1O94910 1474 aa16.15■□□□□ 0.18
SOX6-213ENST00000530378 DAPK1P53355 1430 aa16.14■□□□□ 0.17
SOX6-213ENST00000530378 PTPRKQ15262 1439 aa16.14■□□□□ 0.17
SOX6-213ENST00000530378 AKNAQ7Z591 1439 aa16.14■□□□□ 0.17
SOX6-213ENST00000530378 CHIC2Q9UKJ5 165 aa16.13■□□□□ 0.17
SOX6-213ENST00000530378 ILDR1Q86SU0 546 aaPredicted RBP16.12■□□□□ 0.17
SOX6-213ENST00000530378 ABCC5O15440 1437 aa16.12■□□□□ 0.17
SOX6-213ENST00000530378 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.12■□□□□ 0.17
SOX6-213ENST00000530378 ARHGEF5Q12774 1597 aa16.11■□□□□ 0.17
SOX6-213ENST00000530378 PLEKHH2Q8IVE3 1493 aa16.11■□□□□ 0.17
SOX6-213ENST00000530378 MBD5Q9P267 1494 aa16.11■□□□□ 0.17
SOX6-213ENST00000530378 SCAPERQ9BY12 1400 aa16.11■□□□□ 0.17
SOX6-213ENST00000530378 TRAPPC8Q9Y2L5 1435 aa16.11■□□□□ 0.17
SOX6-213ENST00000530378 CCDC141Q6ZP82 1450 aa16.11■□□□□ 0.17
SOX6-213ENST00000530378 TEX14Q8IWB6 1497 aa16.1■□□□□ 0.17
SOX6-213ENST00000530378 NEO1Q92859 1461 aa16.1■□□□□ 0.17
SOX6-213ENST00000530378 ADGBQ8N7X0 1667 aa16.09■□□□□ 0.17
SOX6-213ENST00000530378 KIAA1107Q9UPP5 1409 aa16.08■□□□□ 0.16
SOX6-213ENST00000530378 AFAP1Q8N556 730 aa16.07■□□□□ 0.16
SOX6-213ENST00000530378 C9orf84Q5VXU9 1444 aa16.06■□□□□ 0.16
SOX6-213ENST00000530378 RRP7BPQ9NSQ0 103 aa16.05■□□□□ 0.16
SOX6-213ENST00000530378 RICTORQ6R327 1708 aa16.05■□□□□ 0.16
SOX6-213ENST00000530378 POGZQ7Z3K3 1410 aa16.05■□□□□ 0.16
SOX6-213ENST00000530378 RAPGEF3O95398 923 aa16.05■□□□□ 0.16
SOX6-213ENST00000530378 FRMPD1Q5SYB0 1578 aa16.04■□□□□ 0.16
SOX6-213ENST00000530378 DENND4BO75064 1496 aaPredicted RBP16.03■□□□□ 0.16
SOX6-213ENST00000530378 SHANK2Q9UPX8 1470 aa16.03■□□□□ 0.16
SOX6-213ENST00000530378 MYT1LQ9UL68 1186 aa16.03■□□□□ 0.16
SOX6-213ENST00000530378 ZFYVE16Q7Z3T8 1539 aa16.02■□□□□ 0.16
SOX6-213ENST00000530378 ZNF518AQ6AHZ1 1483 aa16.02■□□□□ 0.16
SOX6-213ENST00000530378 TSPY4P0CV99 314 aa16.01■□□□□ 0.15
SOX6-213ENST00000530378 TSPY10P0CW01 314 aa16.01■□□□□ 0.15
SOX6-213ENST00000530378 GCC2Q8IWJ2 1684 aa16.01■□□□□ 0.15
SOX6-213ENST00000530378 INO80Q9ULG1 1556 aaPredicted RBP16.01■□□□□ 0.15
SOX6-213ENST00000530378 MAST1Q9Y2H9 1570 aa16.01■□□□□ 0.15
SOX6-213ENST00000530378 ATP7AQ04656 1500 aa16■□□□□ 0.15
SOX6-213ENST00000530378 COL17A1Q9UMD9 1497 aaPredicted RBP16■□□□□ 0.15
SOX6-213ENST00000530378 SPAG9O60271 1321 aaKnown RBP16■□□□□ 0.15
SOX6-213ENST00000530378 KDM5CP41229 1560 aa16■□□□□ 0.15
SOX6-213ENST00000530378 HECW2Q9P2P5 1572 aa16■□□□□ 0.15
SOX6-213ENST00000530378 KDM6BO15054 1643 aa16■□□□□ 0.15
SOX6-213ENST00000530378 KIDINS220Q9ULH0 1771 aa15.99■□□□□ 0.15
SOX6-213ENST00000530378 ADGRL2O95490 1459 aa15.98■□□□□ 0.15
SOX6-213ENST00000530378 PLXNC1O60486 1568 aa15.97■□□□□ 0.15
SOX6-213ENST00000530378 NAIPQ13075 1403 aa15.97■□□□□ 0.15
SOX6-213ENST00000530378 NCOA1Q15788 1441 aa15.97■□□□□ 0.15
SOX6-213ENST00000530378 RSPH4AQ5TD94 716 aa15.97■□□□□ 0.15
SOX6-213ENST00000530378 ANKRD30AQ9BXX3 1397 aa15.97■□□□□ 0.15
SOX6-213ENST00000530378 ABCA6Q8N139 1617 aa15.97■□□□□ 0.15
SOX6-213ENST00000530378 HFM1A2PYH4 1435 aa15.96■□□□□ 0.15
SOX6-213ENST00000530378 KIF15Q9NS87 1388 aa15.96■□□□□ 0.15
SOX6-213ENST00000530378 ROCK1Q13464 1354 aa15.96■□□□□ 0.14
SOX6-213ENST00000530378 RAB3GAP2Q9H2M9 1393 aa15.95■□□□□ 0.14
SOX6-213ENST00000530378 SETD5Q9C0A6 1442 aa15.95■□□□□ 0.14
SOX6-213ENST00000530378 YEATS2Q9ULM3 1422 aa15.93■□□□□ 0.14
SOX6-213ENST00000530378 ZMYM4Q5VZL5 1548 aa15.93■□□□□ 0.14
SOX6-213ENST00000530378 DIP2CQ9Y2E4 1556 aa15.92■□□□□ 0.14
SOX6-213ENST00000530378 MLH3Q9UHC1 1453 aa15.91■□□□□ 0.14
SOX6-213ENST00000530378 RTEL1-TNFRSF6BF6WH68 1400 aa15.91■□□□□ 0.14
SOX6-213ENST00000530378 ANKRD50Q9ULJ7 1429 aa15.9■□□□□ 0.14
SOX6-213ENST00000530378 DUOX2Q9NRD8 1548 aa15.89■□□□□ 0.13
SOX6-213ENST00000530378 ARHGEF40Q8TER5 1519 aa15.88■□□□□ 0.13
SOX6-213ENST00000530378 KDM4FA0A1W2PPD8 638 aa15.86■□□□□ 0.13
SOX6-213ENST00000530378 SIGLEC1Q9BZZ2 1709 aa15.85■□□□□ 0.13
SOX6-213ENST00000530378 A2MP01023 1474 aa15.85■□□□□ 0.13
SOX6-213ENST00000530378 TRIM52Q96A61 297 aa15.84■□□□□ 0.13
SOX6-213ENST00000530378 ERBINQ96RT1 1412 aa15.83■□□□□ 0.13
SOX6-213ENST00000530378 MAGI2Q86UL8 1455 aa15.83■□□□□ 0.12
SOX6-213ENST00000530378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.82■□□□□ 0.12
SOX6-213ENST00000530378 DHX29Q7Z478 1369 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms