RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 MYO5CQ9NQX4 1742 aa6□□□□□ -1.45
PTPN22-207ENST00000528414 BCANQ96GW7 911 aa6□□□□□ -1.45
PTPN22-207ENST00000528414 RAPGEF6Q8TEU7 1601 aa6□□□□□ -1.45
PTPN22-207ENST00000528414 EIF2AK4Q9P2K8 1649 aaKnown RBP6□□□□□ -1.45
PTPN22-207ENST00000528414 ADGBQ8N7X0 1667 aa6□□□□□ -1.45
PTPN22-207ENST00000528414 NPM2Q86SE8 214 aaKnown RBP5.99□□□□□ -1.45
PTPN22-207ENST00000528414 NPATQ14207 1427 aa5.99□□□□□ -1.45
PTPN22-207ENST00000528414 LOC105371045A0A1W2PR82 267 aa5.99□□□□□ -1.45
PTPN22-207ENST00000528414 UACAQ9BZF9 1416 aa5.99□□□□□ -1.45
PTPN22-207ENST00000528414 C3P01024 1663 aa5.99□□□□□ -1.45
PTPN22-207ENST00000528414 PREX2Q70Z35 1606 aa5.98□□□□□ -1.45
PTPN22-207ENST00000528414 INO80Q9ULG1 1556 aaPredicted RBP5.98□□□□□ -1.45
PTPN22-207ENST00000528414 PRG4Q92954 1404 aaPredicted RBP5.98□□□□□ -1.45
PTPN22-207ENST00000528414 RNF17Q9BXT8 1623 aaKnown RBP5.97□□□□□ -1.45
PTPN22-207ENST00000528414 NWD1Q149M9 1564 aa5.96□□□□□ -1.46
PTPN22-207ENST00000528414 KDM5DQ9BY66 1539 aa5.96□□□□□ -1.46
PTPN22-207ENST00000528414 HECW1Q76N89 1606 aa5.96□□□□□ -1.46
PTPN22-207ENST00000528414 CPS1P31327 1500 aa5.96□□□□□ -1.46
PTPN22-207ENST00000528414 PTPRMP28827 1452 aa5.96□□□□□ -1.46
PTPN22-207ENST00000528414 ASXL2Q76L83 1435 aa5.95□□□□□ -1.46
PTPN22-207ENST00000528414 MAST1Q9Y2H9 1570 aa5.95□□□□□ -1.46
PTPN22-207ENST00000528414 RIMS1Q86UR5 1692 aaKnown RBP5.95□□□□□ -1.46
PTPN22-207ENST00000528414 MYO3AQ8NEV4 1616 aa5.95□□□□□ -1.46
PTPN22-207ENST00000528414 FBXO41Q8TF61 875 aa5.95□□□□□ -1.46
PTPN22-207ENST00000528414 KDM4FA0A1W2PPD8 638 aa5.94□□□□□ -1.46
PTPN22-207ENST00000528414 HRCP23327 699 aa5.94□□□□□ -1.46
PTPN22-207ENST00000528414 FANCAO15360 1455 aa5.94□□□□□ -1.46
PTPN22-207ENST00000528414 UBE2Q2Q8WVN8 375 aa5.93□□□□□ -1.46
PTPN22-207ENST00000528414 CARMIL2Q6F5E8 1435 aa5.93□□□□□ -1.46
PTPN22-207ENST00000528414 MED14O60244 1454 aa5.93□□□□□ -1.46
PTPN22-207ENST00000528414 ALKQ9UM73 1620 aa5.93□□□□□ -1.46
PTPN22-207ENST00000528414 DIP2CQ9Y2E4 1556 aa5.92□□□□□ -1.46
PTPN22-207ENST00000528414 PDIA4P13667 645 aaKnown RBP5.92□□□□□ -1.46
PTPN22-207ENST00000528414 SPHKAPQ2M3C7 1700 aa5.92□□□□□ -1.46
PTPN22-207ENST00000528414 PRXQ9BXM0 1461 aa5.92□□□□□ -1.46
PTPN22-207ENST00000528414 TCOF1Q13428 1488 aaKnown RBP5.91□□□□□ -1.46
PTPN22-207ENST00000528414 ZFYVE16Q7Z3T8 1539 aa5.91□□□□□ -1.46
PTPN22-207ENST00000528414 MLH3Q9UHC1 1453 aa5.91□□□□□ -1.46
PTPN22-207ENST00000528414 TSPOAP1O95153 1857 aa5.91□□□□□ -1.46
PTPN22-207ENST00000528414 LRP5O75197 1615 aa5.91□□□□□ -1.46
PTPN22-207ENST00000528414 SETD1BQ9UPS6 1966 aaKnown RBP5.9□□□□□ -1.46
PTPN22-207ENST00000528414 PLCB2Q00722 1185 aa5.9□□□□□ -1.46
PTPN22-207ENST00000528414 SETD1AO15047 1707 aaKnown RBP5.9□□□□□ -1.46
PTPN22-207ENST00000528414 NCOA2Q15596 1464 aa5.9□□□□□ -1.46
PTPN22-207ENST00000528414 TRIM26Q12899 539 aaPredicted RBP5.9□□□□□ -1.46
PTPN22-207ENST00000528414 C14orf37Q86TY3 774 aa5.9□□□□□ -1.46
PTPN22-207ENST00000528414 ABCA6Q8N139 1617 aa5.9□□□□□ -1.46
PTPN22-207ENST00000528414 TMEM132AQ24JP5 1023 aa5.9□□□□□ -1.47
PTPN22-207ENST00000528414 PRAG1Q86YV5 1406 aa5.89□□□□□ -1.47
PTPN22-207ENST00000528414 CNTLNQ9NXG0 1405 aa5.89□□□□□ -1.47
PTPN22-207ENST00000528414 XIRP1Q702N8 1843 aaKnown RBP5.89□□□□□ -1.47
PTPN22-207ENST00000528414 LRRIQ1Q96JM4 1722 aa5.88□□□□□ -1.47
PTPN22-207ENST00000528414 SHPRHQ149N8 1683 aa5.88□□□□□ -1.47
PTPN22-207ENST00000528414 FBXO3Q9UK99 471 aa5.87□□□□□ -1.47
PTPN22-207ENST00000528414 NEURL4Q96JN8 1562 aa5.87□□□□□ -1.47
PTPN22-207ENST00000528414 CDC42BPBQ9Y5S2 1711 aa5.87□□□□□ -1.47
PTPN22-207ENST00000528414 PHF23Q9BUL5 403 aaPredicted RBP5.87□□□□□ -1.47
PTPN22-207ENST00000528414 ABCC1P33527 1531 aa5.87□□□□□ -1.47
PTPN22-207ENST00000528414 PLEKHH2Q8IVE3 1493 aa5.87□□□□□ -1.47
PTPN22-207ENST00000528414 KIF27Q86VH2 1401 aa5.87□□□□□ -1.47
PTPN22-207ENST00000528414 VWDEQ8N2E2 1590 aa5.86□□□□□ -1.47
PTPN22-207ENST00000528414 CDK12Q9NYV4 1490 aaPredicted RBP5.86□□□□□ -1.47
PTPN22-207ENST00000528414 CD109Q6YHK3 1445 aa5.86□□□□□ -1.47
PTPN22-207ENST00000528414 KIDINS220Q9ULH0 1771 aa5.86□□□□□ -1.47
PTPN22-207ENST00000528414 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.86□□□□□ -1.47
PTPN22-207ENST00000528414 IGF1RP08069 1367 aa5.86□□□□□ -1.47
PTPN22-207ENST00000528414 RAPGEF2Q9Y4G8 1499 aa5.86□□□□□ -1.47
PTPN22-207ENST00000528414 MROH1Q8NDA8 1641 aa5.85□□□□□ -1.47
PTPN22-207ENST00000528414 ABCC3O15438 1527 aa5.85□□□□□ -1.47
PTPN22-207ENST00000528414 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.85□□□□□ -1.47
PTPN22-207ENST00000528414 C9orf84Q5VXU9 1444 aa5.84□□□□□ -1.47
PTPN22-207ENST00000528414 UGGT1Q9NYU2 1555 aa5.84□□□□□ -1.47
PTPN22-207ENST00000528414 SAMD1Q6SPF0 538 aaPredicted RBP5.84□□□□□ -1.48
PTPN22-207ENST00000528414 TRIM41Q8WV44 630 aa5.84□□□□□ -1.48
PTPN22-207ENST00000528414 CHMP4AQ9BY43 222 aa5.84□□□□□ -1.48
PTPN22-207ENST00000528414 NCOA1Q15788 1441 aa5.84□□□□□ -1.48
PTPN22-207ENST00000528414 POGZQ7Z3K3 1410 aa5.84□□□□□ -1.48
PTPN22-207ENST00000528414 RGPD3A6NKT7 1758 aaPredicted RBP5.83□□□□□ -1.48
PTPN22-207ENST00000528414 RGPD4Q7Z3J3 1758 aa5.83□□□□□ -1.48
PTPN22-207ENST00000528414 CROCC2H7BZ55 1655 aa5.83□□□□□ -1.48
PTPN22-207ENST00000528414 COL24A1Q17RW2 1714 aa5.83□□□□□ -1.48
PTPN22-207ENST00000528414 EEA1Q15075 1411 aa5.83□□□□□ -1.48
PTPN22-207ENST00000528414 MED1Q15648 1581 aaPredicted RBP5.83□□□□□ -1.48
PTPN22-207ENST00000528414 CDC42BPAQ5VT25 1732 aa5.83□□□□□ -1.48
PTPN22-207ENST00000528414 ARHGEF5Q12774 1597 aa5.83□□□□□ -1.48
PTPN22-207ENST00000528414 CDK13Q14004 1512 aaKnown RBP5.82□□□□□ -1.48
PTPN22-207ENST00000528414 DIP2AQ14689 1571 aa5.82□□□□□ -1.48
PTPN22-207ENST00000528414 SUPT6HQ7KZ85 1726 aaKnown RBP5.81□□□□□ -1.48
PTPN22-207ENST00000528414 COL22A1Q8NFW1 1626 aaPredicted RBP5.81□□□□□ -1.48
PTPN22-207ENST00000528414 TDRD9Q8NDG6 1382 aaKnown RBP5.81□□□□□ -1.48
PTPN22-207ENST00000528414 CEP170BQ9Y4F5 1589 aaPredicted RBP5.8□□□□□ -1.48
PTPN22-207ENST00000528414 PPP6R1Q9UPN7 881 aa5.8□□□□□ -1.48
PTPN22-207ENST00000528414 AKNAQ7Z591 1439 aa5.8□□□□□ -1.48
PTPN22-207ENST00000528414 LMTK2Q8IWU2 1503 aa5.8□□□□□ -1.48
PTPN22-207ENST00000528414 PDE4CQ08493 712 aa5.8□□□□□ -1.48
PTPN22-207ENST00000528414 IQGAP3Q86VI3 1631 aa5.79□□□□□ -1.48
PTPN22-207ENST00000528414 ILDR1Q86SU0 546 aaPredicted RBP5.79□□□□□ -1.48
PTPN22-207ENST00000528414 ATP10AO60312 1499 aa5.79□□□□□ -1.48
PTPN22-207ENST00000528414 ATP10BO94823 1461 aa5.79□□□□□ -1.48
PTPN22-207ENST00000528414 SLIT1O75093 1534 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms