RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 YEATS2Q9ULM3 1422 aa18.74■□□□□ 0.59
CCDC90B-210ENST00000528149 ZMYM4Q5VZL5 1548 aa18.73■□□□□ 0.59
CCDC90B-210ENST00000528149 ZFYVE16Q7Z3T8 1539 aa18.73■□□□□ 0.59
CCDC90B-210ENST00000528149 LRRIQ1Q96JM4 1722 aa18.72■□□□□ 0.59
CCDC90B-210ENST00000528149 CDK13Q14004 1512 aaKnown RBP18.71■□□□□ 0.59
CCDC90B-210ENST00000528149 MLECQ14165 292 aa18.71■□□□□ 0.59
CCDC90B-210ENST00000528149 ARHGEF12Q9NZN5 1544 aa18.67■□□□□ 0.58
CCDC90B-210ENST00000528149 CFAP74Q9C0B2 1584 aa18.67■□□□□ 0.58
CCDC90B-210ENST00000528149 DMRT2Q9Y5R5 561 aa18.66■□□□□ 0.58
CCDC90B-210ENST00000528149 CLIP1P30622 1438 aa18.65■□□□□ 0.58
CCDC90B-210ENST00000528149 CEP162Q5TB80 1403 aa18.64■□□□□ 0.57
CCDC90B-210ENST00000528149 HECW1Q76N89 1606 aa18.63■□□□□ 0.57
CCDC90B-210ENST00000528149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.63■□□□□ 0.57
CCDC90B-210ENST00000528149 HNRNPUL2Q1KMD3 747 aaKnown RBP18.63■□□□□ 0.57
CCDC90B-210ENST00000528149 MAGI2Q86UL8 1455 aa18.63■□□□□ 0.57
CCDC90B-210ENST00000528149 LTBP4Q8N2S1 1624 aa18.63■□□□□ 0.57
CCDC90B-210ENST00000528149 CEBPAP49715 358 aaPredicted RBP18.62■□□□□ 0.57
CCDC90B-210ENST00000528149 PTPRTO14522 1441 aa18.6■□□□□ 0.57
CCDC90B-210ENST00000528149 UHRF1BP1Q6BDS2 1440 aa18.6■□□□□ 0.57
CCDC90B-210ENST00000528149 ATP1B4Q9UN42 357 aaPredicted RBP18.59■□□□□ 0.57
CCDC90B-210ENST00000528149 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.59■□□□□ 0.57
CCDC90B-210ENST00000528149 IQSEC2Q5JU85 1478 aa18.58■□□□□ 0.57
CCDC90B-210ENST00000528149 FMN1Q68DA7 1419 aa18.57■□□□□ 0.56
CCDC90B-210ENST00000528149 C9orf84Q5VXU9 1444 aa18.56■□□□□ 0.56
CCDC90B-210ENST00000528149 SETD1BQ9UPS6 1966 aaKnown RBP18.53■□□□□ 0.56
CCDC90B-210ENST00000528149 ATP10AO60312 1499 aa18.53■□□□□ 0.56
CCDC90B-210ENST00000528149 KIF14Q15058 1648 aa18.53■□□□□ 0.56
CCDC90B-210ENST00000528149 CASKIN1Q8WXD9 1431 aa18.51■□□□□ 0.55
CCDC90B-210ENST00000528149 SCAPERQ9BY12 1400 aa18.5■□□□□ 0.55
CCDC90B-210ENST00000528149 PLEKHD1A6NEE1 506 aa18.49■□□□□ 0.55
CCDC90B-210ENST00000528149 FYCO1Q9BQS8 1478 aa18.47■□□□□ 0.55
CCDC90B-210ENST00000528149 NCOA1Q15788 1441 aa18.47■□□□□ 0.55
CCDC90B-210ENST00000528149 C3P01024 1663 aa18.47■□□□□ 0.55
CCDC90B-210ENST00000528149 MED1Q15648 1581 aaPredicted RBP18.43■□□□□ 0.54
CCDC90B-210ENST00000528149 UBAP1LF5GYI3 381 aa18.43■□□□□ 0.54
CCDC90B-210ENST00000528149 PLCH2O75038 1416 aa18.42■□□□□ 0.54
CCDC90B-210ENST00000528149 TROQ12816 1431 aaPredicted RBP18.4■□□□□ 0.54
CCDC90B-210ENST00000528149 DIP2CQ9Y2E4 1556 aa18.39■□□□□ 0.53
CCDC90B-210ENST00000528149 ZNF335Q9H4Z2 1342 aaPredicted RBP18.39■□□□□ 0.53
CCDC90B-210ENST00000528149 CCDC18Q5T9S5 1454 aa18.39■□□□□ 0.53
CCDC90B-210ENST00000528149 TRAPPC8Q9Y2L5 1435 aa18.38■□□□□ 0.53
CCDC90B-210ENST00000528149 KDM5CP41229 1560 aa18.38■□□□□ 0.53
CCDC90B-210ENST00000528149 CAMSAP1Q5T5Y3 1602 aa18.38■□□□□ 0.53
CCDC90B-210ENST00000528149 VPS8Q8N3P4 1428 aa18.37■□□□□ 0.53
CCDC90B-210ENST00000528149 ZNF518AQ6AHZ1 1483 aa18.37■□□□□ 0.53
CCDC90B-210ENST00000528149 REREQ9P2R6 1566 aa18.36■□□□□ 0.53
CCDC90B-210ENST00000528149 MYO5CQ9NQX4 1742 aa18.35■□□□□ 0.53
CCDC90B-210ENST00000528149 ABCA6Q8N139 1617 aa18.34■□□□□ 0.53
CCDC90B-210ENST00000528149 CDC42BPBQ9Y5S2 1711 aa18.32■□□□□ 0.52
CCDC90B-210ENST00000528149 AFAP1Q8N556 730 aa18.31■□□□□ 0.52
CCDC90B-210ENST00000528149 NCKAP5LQ9HCH0 1330 aa18.3■□□□□ 0.52
CCDC90B-210ENST00000528149 AGLP35573 1532 aa18.3■□□□□ 0.52
CCDC90B-210ENST00000528149 CDC42BPAQ5VT25 1732 aa18.3■□□□□ 0.52
CCDC90B-210ENST00000528149 HSPA1LP34931 641 aa18.3■□□□□ 0.52
CCDC90B-210ENST00000528149 EFCAB2Q5VUJ9 269 aa18.3■□□□□ 0.52
CCDC90B-210ENST00000528149 PREX2Q70Z35 1606 aa18.29■□□□□ 0.52
CCDC90B-210ENST00000528149 TIAM1Q13009 1591 aa18.29■□□□□ 0.52
CCDC90B-210ENST00000528149 ESF1Q9H501 851 aaKnown RBP18.28■□□□□ 0.52
CCDC90B-210ENST00000528149 MYT1LQ9UL68 1186 aa18.28■□□□□ 0.52
CCDC90B-210ENST00000528149 CNTLNQ9NXG0 1405 aa18.26■□□□□ 0.51
CCDC90B-210ENST00000528149 ARHGAP5Q13017 1502 aa18.26■□□□□ 0.51
CCDC90B-210ENST00000528149 SCAF1Q9H7N4 1312 aaKnown RBP18.25■□□□□ 0.51
CCDC90B-210ENST00000528149 NPATQ14207 1427 aa18.24■□□□□ 0.51
CCDC90B-210ENST00000528149 EHBP1L1Q8N3D4 1523 aa18.24■□□□□ 0.51
CCDC90B-210ENST00000528149 MLH3Q9UHC1 1453 aa18.24■□□□□ 0.51
CCDC90B-210ENST00000528149 ZNF142P52746 1687 aaPredicted RBP18.24■□□□□ 0.51
CCDC90B-210ENST00000528149 PLA2R1Q13018 1463 aa18.23■□□□□ 0.51
CCDC90B-210ENST00000528149 PIP4K2BP78356 416 aa18.23■□□□□ 0.51
CCDC90B-210ENST00000528149 CDK11AQ9UQ88 783 aaPredicted RBP18.23■□□□□ 0.51
CCDC90B-210ENST00000528149 MYO3AQ8NEV4 1616 aa18.23■□□□□ 0.51
CCDC90B-210ENST00000528149 MROH2AA6NES4 1674 aa18.22■□□□□ 0.51
CCDC90B-210ENST00000528149 TCOF1Q13428 1488 aaKnown RBP18.22■□□□□ 0.51
CCDC90B-210ENST00000528149 MTUS2Q5JR59 1369 aa18.22■□□□□ 0.51
CCDC90B-210ENST00000528149 PHF23Q9BUL5 403 aaPredicted RBP18.22■□□□□ 0.51
CCDC90B-210ENST00000528149 SAMD9LQ8IVG5 1584 aa18.21■□□□□ 0.51
CCDC90B-210ENST00000528149 KANK4Q5T7N3 995 aaPredicted RBP18.21■□□□□ 0.51
CCDC90B-210ENST00000528149 SUPT6HQ7KZ85 1726 aaKnown RBP18.2■□□□□ 0.5
CCDC90B-210ENST00000528149 GPATCH8Q9UKJ3 1502 aaKnown RBP18.2■□□□□ 0.5
CCDC90B-210ENST00000528149 ABCC1P33527 1531 aa18.19■□□□□ 0.5
CCDC90B-210ENST00000528149 PKD2Q13563 968 aa18.19■□□□□ 0.5
CCDC90B-210ENST00000528149 CEP170BQ9Y4F5 1589 aaPredicted RBP18.19■□□□□ 0.5
CCDC90B-210ENST00000528149 ITSN2Q9NZM3 1697 aa18.18■□□□□ 0.5
CCDC90B-210ENST00000528149 KIDINS220Q9ULH0 1771 aa18.17■□□□□ 0.5
CCDC90B-210ENST00000528149 LRRC9Q6ZRR7 1453 aa18.17■□□□□ 0.5
CCDC90B-210ENST00000528149 NCOA2Q15596 1464 aa18.16■□□□□ 0.5
CCDC90B-210ENST00000528149 PPP6R1Q9UPN7 881 aa18.16■□□□□ 0.5
CCDC90B-210ENST00000528149 ZMYM3Q14202 1370 aa18.16■□□□□ 0.5
CCDC90B-210ENST00000528149 SYCP2Q9BX26 1530 aa18.15■□□□□ 0.5
CCDC90B-210ENST00000528149 MAP3K1Q13233 1512 aa18.14■□□□□ 0.49
CCDC90B-210ENST00000528149 ZNF644Q9H582 1327 aaPredicted RBP18.14■□□□□ 0.49
CCDC90B-210ENST00000528149 TOM1O60784 492 aa18.13■□□□□ 0.49
CCDC90B-210ENST00000528149 ZNF777Q9ULD5 760 aaPredicted RBP18.13■□□□□ 0.49
CCDC90B-210ENST00000528149 CLTCQ00610 1675 aaKnown RBP18.12■□□□□ 0.49
CCDC90B-210ENST00000528149 CCNB3Q8WWL7 1395 aa18.12■□□□□ 0.49
CCDC90B-210ENST00000528149 CPS1P31327 1500 aa18.12■□□□□ 0.49
CCDC90B-210ENST00000528149 ALKQ9UM73 1620 aa18.12■□□□□ 0.49
CCDC90B-210ENST00000528149 PTPRKQ15262 1439 aa18.1■□□□□ 0.49
CCDC90B-210ENST00000528149 APLP2Q06481 763 aa18.07■□□□□ 0.48
CCDC90B-210ENST00000528149 NEURL4Q96JN8 1562 aa18.07■□□□□ 0.48
CCDC90B-210ENST00000528149 SHANK2Q9UPX8 1470 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms