RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 FANCAO15360 1455 aa16.83■□□□□ 0.28
NEDD8-205ENST00000527046 TEX14Q8IWB6 1497 aa16.83■□□□□ 0.28
NEDD8-205ENST00000527046 CCNB3Q8WWL7 1395 aa16.83■□□□□ 0.28
NEDD8-205ENST00000527046 NEO1Q92859 1461 aa16.83■□□□□ 0.28
NEDD8-205ENST00000527046 AKNAQ7Z591 1439 aa16.82■□□□□ 0.28
NEDD8-205ENST00000527046 ZNF644Q9H582 1327 aaPredicted RBP16.82■□□□□ 0.28
NEDD8-205ENST00000527046 EFCAB2Q5VUJ9 269 aa16.82■□□□□ 0.28
NEDD8-205ENST00000527046 ARHGEF12Q9NZN5 1544 aa16.81■□□□□ 0.28
NEDD8-205ENST00000527046 CFDP1Q9UEE9 299 aaPredicted RBP16.79■□□□□ 0.28
NEDD8-205ENST00000527046 SAMD9LQ8IVG5 1584 aa16.79■□□□□ 0.28
NEDD8-205ENST00000527046 ARHGAP5Q13017 1502 aa16.79■□□□□ 0.28
NEDD8-205ENST00000527046 MYOM3Q5VTT5 1437 aa16.78■□□□□ 0.28
NEDD8-205ENST00000527046 SCAPERQ9BY12 1400 aa16.76■□□□□ 0.27
NEDD8-205ENST00000527046 RAPGEF3O95398 923 aa16.75■□□□□ 0.27
NEDD8-205ENST00000527046 ITSN2Q9NZM3 1697 aa16.75■□□□□ 0.27
NEDD8-205ENST00000527046 MBD5Q9P267 1494 aa16.74■□□□□ 0.27
NEDD8-205ENST00000527046 FRMPD1Q5SYB0 1578 aa16.74■□□□□ 0.27
NEDD8-205ENST00000527046 MIA2Q96PC5 1412 aa16.74■□□□□ 0.27
NEDD8-205ENST00000527046 ZNF777Q9ULD5 760 aaPredicted RBP16.74■□□□□ 0.27
NEDD8-205ENST00000527046 ADGRL1O94910 1474 aa16.73■□□□□ 0.27
NEDD8-205ENST00000527046 CFAP74Q9C0B2 1584 aa16.73■□□□□ 0.27
NEDD8-205ENST00000527046 KIAA1107Q9UPP5 1409 aa16.73■□□□□ 0.27
NEDD8-205ENST00000527046 TRAPPC8Q9Y2L5 1435 aa16.73■□□□□ 0.27
NEDD8-205ENST00000527046 HNRNPMP52272 730 aaKnown RBP eCLIP16.73■□□□□ 0.27
NEDD8-205ENST00000527046 ABCC1P33527 1531 aa16.73■□□□□ 0.27
NEDD8-205ENST00000527046 KDM6BO15054 1643 aa16.73■□□□□ 0.27
NEDD8-205ENST00000527046 RICTORQ6R327 1708 aa16.72■□□□□ 0.27
NEDD8-205ENST00000527046 FGD6Q6ZV73 1430 aa16.71■□□□□ 0.27
NEDD8-205ENST00000527046 AFAP1Q8N556 730 aa16.71■□□□□ 0.27
NEDD8-205ENST00000527046 DENND4BO75064 1496 aaPredicted RBP16.71■□□□□ 0.27
NEDD8-205ENST00000527046 TCOF1Q13428 1488 aaKnown RBP16.7■□□□□ 0.26
NEDD8-205ENST00000527046 CAMSAP2Q08AD1 1489 aa16.69■□□□□ 0.26
NEDD8-205ENST00000527046 POGZQ7Z3K3 1410 aa16.69■□□□□ 0.26
NEDD8-205ENST00000527046 SYCP2Q9BX26 1530 aa16.68■□□□□ 0.26
NEDD8-205ENST00000527046 PTPN23Q9H3S7 1636 aa16.67■□□□□ 0.26
NEDD8-205ENST00000527046 KDM5CP41229 1560 aa16.66■□□□□ 0.26
NEDD8-205ENST00000527046 PLEKHH2Q8IVE3 1493 aa16.66■□□□□ 0.26
NEDD8-205ENST00000527046 RRBP1Q9P2E9 1410 aaKnown RBP16.64■□□□□ 0.25
NEDD8-205ENST00000527046 ZMYM4Q5VZL5 1548 aa16.64■□□□□ 0.25
NEDD8-205ENST00000527046 ARHGEF5Q12774 1597 aa16.63■□□□□ 0.25
NEDD8-205ENST00000527046 ABCC5O15440 1437 aa16.62■□□□□ 0.25
NEDD8-205ENST00000527046 ZNF518AQ6AHZ1 1483 aa16.62■□□□□ 0.25
NEDD8-205ENST00000527046 YEATS2Q9ULM3 1422 aa16.62■□□□□ 0.25
NEDD8-205ENST00000527046 MLH3Q9UHC1 1453 aa16.61■□□□□ 0.25
NEDD8-205ENST00000527046 RSPH4AQ5TD94 716 aa16.61■□□□□ 0.25
NEDD8-205ENST00000527046 PTPRKQ15262 1439 aa16.61■□□□□ 0.25
NEDD8-205ENST00000527046 KIDINS220Q9ULH0 1771 aa16.6■□□□□ 0.25
NEDD8-205ENST00000527046 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.6■□□□□ 0.25
NEDD8-205ENST00000527046 MAGI2Q86UL8 1455 aa16.58■□□□□ 0.24
NEDD8-205ENST00000527046 DNMT1P26358 1616 aaKnown RBP16.57■□□□□ 0.24
NEDD8-205ENST00000527046 CCDC141Q6ZP82 1450 aa16.57■□□□□ 0.24
NEDD8-205ENST00000527046 DAPK1P53355 1430 aa16.57■□□□□ 0.24
NEDD8-205ENST00000527046 FAM50AQ14320 339 aaKnown RBP16.57■□□□□ 0.24
NEDD8-205ENST00000527046 SIGLEC1Q9BZZ2 1709 aa16.56■□□□□ 0.24
NEDD8-205ENST00000527046 INO80Q9ULG1 1556 aaPredicted RBP16.56■□□□□ 0.24
NEDD8-205ENST00000527046 RTEL1-TNFRSF6BF6WH68 1400 aa16.56■□□□□ 0.24
NEDD8-205ENST00000527046 SPAG9O60271 1321 aaKnown RBP16.55■□□□□ 0.24
NEDD8-205ENST00000527046 HECW2Q9P2P5 1572 aa16.55■□□□□ 0.24
NEDD8-205ENST00000527046 MAST1Q9Y2H9 1570 aa16.55■□□□□ 0.24
NEDD8-205ENST00000527046 ABCA6Q8N139 1617 aa16.54■□□□□ 0.24
NEDD8-205ENST00000527046 ZFYVE16Q7Z3T8 1539 aa16.54■□□□□ 0.24
NEDD8-205ENST00000527046 DIP2CQ9Y2E4 1556 aa16.53■□□□□ 0.24
NEDD8-205ENST00000527046 ATP7AQ04656 1500 aa16.53■□□□□ 0.24
NEDD8-205ENST00000527046 CROCC2H7BZ55 1655 aa16.53■□□□□ 0.24
NEDD8-205ENST00000527046 ARHGEF40Q8TER5 1519 aa16.51■□□□□ 0.23
NEDD8-205ENST00000527046 ATP10AO60312 1499 aa16.51■□□□□ 0.23
NEDD8-205ENST00000527046 TSPY4P0CV99 314 aa16.51■□□□□ 0.23
NEDD8-205ENST00000527046 TSPY10P0CW01 314 aa16.51■□□□□ 0.23
NEDD8-205ENST00000527046 C9orf84Q5VXU9 1444 aa16.51■□□□□ 0.23
NEDD8-205ENST00000527046 SHANK2Q9UPX8 1470 aa16.5■□□□□ 0.23
NEDD8-205ENST00000527046 CHIC2Q9UKJ5 165 aa16.5■□□□□ 0.23
NEDD8-205ENST00000527046 NCOA1Q15788 1441 aa16.48■□□□□ 0.23
NEDD8-205ENST00000527046 REREQ9P2R6 1566 aa16.47■□□□□ 0.23
NEDD8-205ENST00000527046 ADGBQ8N7X0 1667 aa16.47■□□□□ 0.23
NEDD8-205ENST00000527046 ADGRL2O95490 1459 aa16.47■□□□□ 0.23
NEDD8-205ENST00000527046 ITGAEP38570 1179 aa16.45■□□□□ 0.22
NEDD8-205ENST00000527046 DHX29Q7Z478 1369 aaKnown RBP16.45■□□□□ 0.22
NEDD8-205ENST00000527046 PLXNC1O60486 1568 aa16.45■□□□□ 0.22
NEDD8-205ENST00000527046 A2MP01023 1474 aa16.44■□□□□ 0.22
NEDD8-205ENST00000527046 RRP7BPQ9NSQ0 103 aa16.44■□□□□ 0.22
NEDD8-205ENST00000527046 MYT1LQ9UL68 1186 aa16.44■□□□□ 0.22
NEDD8-205ENST00000527046 AGLP35573 1532 aa16.43■□□□□ 0.22
NEDD8-205ENST00000527046 ROCK1Q13464 1354 aa16.42■□□□□ 0.22
NEDD8-205ENST00000527046 ANKRD30AQ9BXX3 1397 aa16.4■□□□□ 0.22
NEDD8-205ENST00000527046 KIF15Q9NS87 1388 aa16.4■□□□□ 0.22
NEDD8-205ENST00000527046 KDM4FA0A1W2PPD8 638 aa16.4■□□□□ 0.22
NEDD8-205ENST00000527046 DUOX2Q9NRD8 1548 aa16.38■□□□□ 0.21
NEDD8-205ENST00000527046 BCORL1Q5H9F3 1711 aa16.37■□□□□ 0.21
NEDD8-205ENST00000527046 NAIPQ13075 1403 aa16.36■□□□□ 0.21
NEDD8-205ENST00000527046 ADAMTSL3P82987 1691 aa16.36■□□□□ 0.21
NEDD8-205ENST00000527046 KIF3BO15066 747 aa16.35■□□□□ 0.21
NEDD8-205ENST00000527046 ARID4BQ4LE39 1312 aaPredicted RBP16.34■□□□□ 0.21
NEDD8-205ENST00000527046 MROH1Q8NDA8 1641 aa16.34■□□□□ 0.21
NEDD8-205ENST00000527046 MLECQ14165 292 aa16.33■□□□□ 0.2
NEDD8-205ENST00000527046 HFM1A2PYH4 1435 aa16.33■□□□□ 0.2
NEDD8-205ENST00000527046 ERBINQ96RT1 1412 aa16.33■□□□□ 0.2
NEDD8-205ENST00000527046 ANKRD50Q9ULJ7 1429 aa16.33■□□□□ 0.2
NEDD8-205ENST00000527046 EIF2AK4Q9P2K8 1649 aaKnown RBP16.32■□□□□ 0.2
NEDD8-205ENST00000527046 RNF17Q9BXT8 1623 aaKnown RBP16.3■□□□□ 0.2
NEDD8-205ENST00000527046 GGT6Q6P531 493 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms