RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 PTPRMP28827 1452 aa7.24□□□□□ -1.25
CSDE1-209ENST00000525132 CLASP1Q7Z460 1538 aa7.24□□□□□ -1.25
CSDE1-209ENST00000525132 SGIP1Q9BQI5 828 aa7.24□□□□□ -1.25
CSDE1-209ENST00000525132 SETD1AO15047 1707 aaKnown RBP7.24□□□□□ -1.25
CSDE1-209ENST00000525132 YY1P25490 414 aa7.23□□□□□ -1.25
CSDE1-209ENST00000525132 DCAF8Q5TAQ9 597 aa7.23□□□□□ -1.25
CSDE1-209ENST00000525132 MAP3K13O43283 966 aa7.22□□□□□ -1.25
CSDE1-209ENST00000525132 PAK3O75914 559 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-209ENST00000525132 PYGBP11216 843 aa7.21□□□□□ -1.26
CSDE1-209ENST00000525132 CIZ1Q9ULV3 898 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-209ENST00000525132 MS4A3Q96HJ5 214 aa7.2□□□□□ -1.26
CSDE1-209ENST00000525132 MYO15BQ96JP2 1530 aa7.2□□□□□ -1.26
CSDE1-209ENST00000525132 DIP2BQ9P265 1576 aa7.2□□□□□ -1.26
CSDE1-209ENST00000525132 COL17A1Q9UMD9 1497 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-209ENST00000525132 RGL2O15211 777 aa7.19□□□□□ -1.26
CSDE1-209ENST00000525132 IFNL1Q8IU54 200 aa7.19□□□□□ -1.26
CSDE1-209ENST00000525132 PTPRTO14522 1441 aa7.18□□□□□ -1.26
CSDE1-209ENST00000525132 TRPC6Q9Y210 931 aa7.18□□□□□ -1.26
CSDE1-209ENST00000525132 ECM2O94769 699 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-209ENST00000525132 IQSEC2Q5JU85 1478 aa7.17□□□□□ -1.26
CSDE1-209ENST00000525132 METRNQ9UJH8 293 aa7.16□□□□□ -1.26
CSDE1-209ENST00000525132 SMARCA4P51532 1647 aa7.16□□□□□ -1.26
CSDE1-209ENST00000525132 ATAD2BQ9ULI0 1458 aa7.15□□□□□ -1.27
CSDE1-209ENST00000525132 POTEFA5A3E0 1075 aa7.14□□□□□ -1.27
CSDE1-209ENST00000525132 RIOK3O14730 519 aaKnown RBP7.14□□□□□ -1.27
CSDE1-209ENST00000525132 ATMINO43313 823 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-209ENST00000525132 ASTLQ6HA08 431 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-209ENST00000525132 ZNF467Q7Z7K2 595 aaPredicted RBP7.14□□□□□ -1.27
CSDE1-209ENST00000525132 PCDHB13Q9Y5F0 798 aa7.14□□□□□ -1.27
CSDE1-209ENST00000525132 PCDHB8Q9UN66 801 aa7.13□□□□□ -1.27
CSDE1-209ENST00000525132 SETBP1Q9Y6X0 1596 aa7.12□□□□□ -1.27
CSDE1-209ENST00000525132 CADPSQ9ULU8 1353 aa7.11□□□□□ -1.27
CSDE1-209ENST00000525132 TIE1P35590 1138 aa7.11□□□□□ -1.27
CSDE1-209ENST00000525132 PIP4K2BP78356 416 aa7.11□□□□□ -1.27
CSDE1-209ENST00000525132 BMP2KQ9NSY1 1161 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-209ENST00000525132 C7P10643 843 aa7.1□□□□□ -1.27
CSDE1-209ENST00000525132 HMGXB3Q12766 1538 aa7.1□□□□□ -1.27
CSDE1-209ENST00000525132 URB2Q14146 1524 aaKnown RBP7.1□□□□□ -1.27
CSDE1-209ENST00000525132 EIF4G3O43432 1585 aaKnown RBP7.09□□□□□ -1.27
CSDE1-209ENST00000525132 VGFO15240 615 aaPredicted RBP7.09□□□□□ -1.27
CSDE1-209ENST00000525132 PDAP1Q13442 181 aaKnown RBP7.09□□□□□ -1.27
CSDE1-209ENST00000525132 SCUBE2Q9NQ36 999 aa7.09□□□□□ -1.27
CSDE1-209ENST00000525132 TTLL13PA6NNM8 815 aa7.08□□□□□ -1.28
CSDE1-209ENST00000525132 C1QTNF8P60827 252 aa7.08□□□□□ -1.28
CSDE1-209ENST00000525132 SLC39A7Q92504 469 aa7.08□□□□□ -1.28
CSDE1-209ENST00000525132 PSEN1P49768 467 aa7.07□□□□□ -1.28
CSDE1-209ENST00000525132 AQRO60306 1485 aaKnown RBP eCLIP7.06□□□□□ -1.283e-7■■□□□ 12.7
CSDE1-209ENST00000525132 IFT140Q96RY7 1462 aa7.06□□□□□ -1.28
CSDE1-209ENST00000525132 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-209ENST00000525132 HS6ST3Q8IZP7 471 aa7.06□□□□□ -1.28
CSDE1-209ENST00000525132 ZFP91Q96JP5 570 aaPredicted RBP7.06□□□□□ -1.28
CSDE1-209ENST00000525132 SYNJ1O43426 1573 aa7.05□□□□□ -1.28
CSDE1-209ENST00000525132 YEATS2Q9ULM3 1422 aa7.04□□□□□ -1.28
CSDE1-209ENST00000525132 ATN1P54259 1190 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-209ENST00000525132 CEP350Q5VT06 3117 aa7.04□□□□□ -1.28
CSDE1-209ENST00000525132 ADAMTSL3P82987 1691 aa7.03□□□□□ -1.28
CSDE1-209ENST00000525132 MAPKBP1O60336 1514 aa7.03□□□□□ -1.28
CSDE1-209ENST00000525132 PRELPP51888 382 aa7.03□□□□□ -1.28
CSDE1-209ENST00000525132 FANCD2Q9BXW9 1451 aa7.03□□□□□ -1.28
CSDE1-209ENST00000525132 TMEM106CQ9BVX2 250 aa7.02□□□□□ -1.29
CSDE1-209ENST00000525132 STRCQ7RTU9 1775 aa7.01□□□□□ -1.29
CSDE1-209ENST00000525132 CHMP7Q8WUX9 453 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-209ENST00000525132 KIF21BO75037 1637 aa7.01□□□□□ -1.29
CSDE1-209ENST00000525132 NKX1-1Q15270 411 aaPredicted RBP7□□□□□ -1.29
CSDE1-209ENST00000525132 BCL11BQ9C0K0 894 aaPredicted RBP7□□□□□ -1.29
CSDE1-209ENST00000525132 PPRC1Q5VV67 1664 aaKnown RBP7□□□□□ -1.29
CSDE1-209ENST00000525132 TRIM35Q9UPQ4 493 aa6.99□□□□□ -1.29
CSDE1-209ENST00000525132 IER5LQ5T953 404 aa6.98□□□□□ -1.29
CSDE1-209ENST00000525132 TAOK2Q9UL54 1235 aa6.98□□□□□ -1.29
CSDE1-209ENST00000525132 ST18O60284 1047 aa6.97□□□□□ -1.29
CSDE1-209ENST00000525132 IRX5P78411 483 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-209ENST00000525132 FBXO22Q8NEZ5 403 aa6.97□□□□□ -1.29
CSDE1-209ENST00000525132 COLQQ9Y215 455 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-209ENST00000525132 STK25O00506 426 aa6.96□□□□□ -1.3
CSDE1-209ENST00000525132 PDCD7Q8N8D1 485 aaKnown RBP6.96□□□□□ -1.3
CSDE1-209ENST00000525132 TRIM52Q96A61 297 aa6.96□□□□□ -1.3
CSDE1-209ENST00000525132 BAZ1BQ9UIG0 1483 aaKnown RBP6.96□□□□□ -1.3
CSDE1-209ENST00000525132 CHGAP10645 457 aaKnown RBP6.95□□□□□ -1.3
CSDE1-209ENST00000525132 MS4A4AQ96JQ5 239 aa6.95□□□□□ -1.3
CSDE1-209ENST00000525132 MFRPQ9BY79 579 aa6.95□□□□□ -1.3
CSDE1-209ENST00000525132 CABP2Q9NPB3 220 aa6.95□□□□□ -1.3
CSDE1-209ENST00000525132 EFCAB3Q8N7B9 438 aa6.94□□□□□ -1.3
CSDE1-209ENST00000525132 STK24Q9Y6E0 443 aa6.94□□□□□ -1.3
CSDE1-209ENST00000525132 ZNF784Q8NCA9 323 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-209ENST00000525132 MADDQ8WXG6 1647 aa6.93□□□□□ -1.3
CSDE1-209ENST00000525132 SOX12O15370 315 aa6.92□□□□□ -1.3
CSDE1-209ENST00000525132 TOM1O60784 492 aa6.91□□□□□ -1.3
CSDE1-209ENST00000525132 COL13A1Q5TAT6 717 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-209ENST00000525132 BBXQ8WY36 941 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-209ENST00000525132 GTPBP6O43824 516 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-209ENST00000525132 PHF8Q9UPP1 1060 aa6.9□□□□□ -1.3
CSDE1-209ENST00000525132 ZNF335Q9H4Z2 1342 aaPredicted RBP6.89□□□□□ -1.31
CSDE1-209ENST00000525132 LRP5O75197 1615 aa6.87□□□□□ -1.31
CSDE1-209ENST00000525132 MPNDQ8N594 471 aa6.87□□□□□ -1.31
CSDE1-209ENST00000525132 TMEM121BQ9BXQ6 578 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-209ENST00000525132 OCEL1Q9H607 264 aa6.87□□□□□ -1.31
CSDE1-209ENST00000525132 MKRN3Q13064 507 aaKnown RBP6.86□□□□□ -1.31
CSDE1-209ENST00000525132 RIMS1Q86UR5 1692 aaKnown RBP6.86□□□□□ -1.31
CSDE1-209ENST00000525132 CFAP43Q8NDM7 1665 aa6.86□□□□□ -1.31
CSDE1-209ENST00000525132 NLRP6P59044 892 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms