RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 CDC42BPBQ9Y5S2 1711 aa20.52■□□□□ 0.88
TRAPPC4-205ENST00000525079 MTUS2Q5JR59 1369 aa20.48■□□□□ 0.87
TRAPPC4-205ENST00000525079 PREX2Q70Z35 1606 aa20.48■□□□□ 0.87
TRAPPC4-205ENST00000525079 CDC42BPAQ5VT25 1732 aa20.47■□□□□ 0.87
TRAPPC4-205ENST00000525079 POGZQ7Z3K3 1410 aa20.47■□□□□ 0.87
TRAPPC4-205ENST00000525079 ARID4BQ4LE39 1312 aaPredicted RBP20.47■□□□□ 0.87
TRAPPC4-205ENST00000525079 YEATS2Q9ULM3 1422 aa20.45■□□□□ 0.86
TRAPPC4-205ENST00000525079 ZMYM4Q5VZL5 1548 aa20.45■□□□□ 0.86
TRAPPC4-205ENST00000525079 ARHGEF40Q8TER5 1519 aa20.45■□□□□ 0.86
TRAPPC4-205ENST00000525079 ZNF777Q9ULD5 760 aaPredicted RBP20.45■□□□□ 0.86
TRAPPC4-205ENST00000525079 ZFYVE16Q7Z3T8 1539 aa20.44■□□□□ 0.86
TRAPPC4-205ENST00000525079 AFAP1Q8N556 730 aa20.44■□□□□ 0.86
TRAPPC4-205ENST00000525079 GPATCH8Q9UKJ3 1502 aaKnown RBP20.43■□□□□ 0.86
TRAPPC4-205ENST00000525079 VPS8Q8N3P4 1428 aa20.42■□□□□ 0.86
TRAPPC4-205ENST00000525079 MYT1LQ9UL68 1186 aa20.41■□□□□ 0.86
TRAPPC4-205ENST00000525079 MAGI2Q86UL8 1455 aa20.4■□□□□ 0.86
TRAPPC4-205ENST00000525079 CCNB3Q8WWL7 1395 aa20.4■□□□□ 0.86
TRAPPC4-205ENST00000525079 ARHGEF12Q9NZN5 1544 aa20.4■□□□□ 0.86
TRAPPC4-205ENST00000525079 EHBP1L1Q8N3D4 1523 aa20.39■□□□□ 0.85
TRAPPC4-205ENST00000525079 ZNF518AQ6AHZ1 1483 aa20.39■□□□□ 0.85
TRAPPC4-205ENST00000525079 ABCC1P33527 1531 aa20.38■□□□□ 0.85
TRAPPC4-205ENST00000525079 TRAPPC8Q9Y2L5 1435 aa20.38■□□□□ 0.85
TRAPPC4-205ENST00000525079 CFDP1Q9UEE9 299 aaPredicted RBP20.38■□□□□ 0.85
TRAPPC4-205ENST00000525079 BCORL1Q5H9F3 1711 aa20.37■□□□□ 0.85
TRAPPC4-205ENST00000525079 SIGLEC1Q9BZZ2 1709 aa20.37■□□□□ 0.85
TRAPPC4-205ENST00000525079 ITSN2Q9NZM3 1697 aa20.37■□□□□ 0.85
TRAPPC4-205ENST00000525079 SAMD9LQ8IVG5 1584 aa20.37■□□□□ 0.85
TRAPPC4-205ENST00000525079 ADAMTSL3P82987 1691 aa20.36■□□□□ 0.85
TRAPPC4-205ENST00000525079 TIAM1Q13009 1591 aa20.36■□□□□ 0.85
TRAPPC4-205ENST00000525079 HNRNPMP52272 730 aaKnown RBP eCLIP20.35■□□□□ 0.85
TRAPPC4-205ENST00000525079 KDM5CP41229 1560 aa20.34■□□□□ 0.85
TRAPPC4-205ENST00000525079 MLECQ14165 292 aa20.34■□□□□ 0.85
TRAPPC4-205ENST00000525079 ATP10AO60312 1499 aa20.34■□□□□ 0.85
TRAPPC4-205ENST00000525079 HECW2Q9P2P5 1572 aa20.32■□□□□ 0.84
TRAPPC4-205ENST00000525079 SYCP2Q9BX26 1530 aa20.32■□□□□ 0.84
TRAPPC4-205ENST00000525079 MADDQ8WXG6 1647 aa20.31■□□□□ 0.84
TRAPPC4-205ENST00000525079 ZNF644Q9H582 1327 aaPredicted RBP20.3■□□□□ 0.84
TRAPPC4-205ENST00000525079 C9orf84Q5VXU9 1444 aa20.3■□□□□ 0.84
TRAPPC4-205ENST00000525079 SUPT6HQ7KZ85 1726 aaKnown RBP20.3■□□□□ 0.84
TRAPPC4-205ENST00000525079 NCOA2Q15596 1464 aa20.3■□□□□ 0.84
TRAPPC4-205ENST00000525079 KANK4Q5T7N3 995 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC4-205ENST00000525079 PTPRMP28827 1452 aa20.29■□□□□ 0.84
TRAPPC4-205ENST00000525079 MLH3Q9UHC1 1453 aa20.29■□□□□ 0.84
TRAPPC4-205ENST00000525079 LRRC9Q6ZRR7 1453 aa20.28■□□□□ 0.84
TRAPPC4-205ENST00000525079 DIP2CQ9Y2E4 1556 aa20.28■□□□□ 0.84
TRAPPC4-205ENST00000525079 ABCA6Q8N139 1617 aa20.27■□□□□ 0.83
TRAPPC4-205ENST00000525079 RIMS1Q86UR5 1692 aaKnown RBP20.26■□□□□ 0.83
TRAPPC4-205ENST00000525079 PLEKHH2Q8IVE3 1493 aa20.26■□□□□ 0.83
TRAPPC4-205ENST00000525079 PLPPR3Q6T4P5 718 aa20.26■□□□□ 0.83
TRAPPC4-205ENST00000525079 KIDINS220Q9ULH0 1771 aa20.25■□□□□ 0.83
TRAPPC4-205ENST00000525079 KIAA1107Q9UPP5 1409 aa20.25■□□□□ 0.83
TRAPPC4-205ENST00000525079 SPAG9O60271 1321 aaKnown RBP20.25■□□□□ 0.83
TRAPPC4-205ENST00000525079 MAP3K1Q13233 1512 aa20.23■□□□□ 0.83
TRAPPC4-205ENST00000525079 APLP2Q06481 763 aa20.23■□□□□ 0.83
TRAPPC4-205ENST00000525079 FER1L4A9Z1Z3 1794 aa20.19■□□□□ 0.82
TRAPPC4-205ENST00000525079 MBD5Q9P267 1494 aa20.18■□□□□ 0.82
TRAPPC4-205ENST00000525079 REREQ9P2R6 1566 aa20.18■□□□□ 0.82
TRAPPC4-205ENST00000525079 CAMSAP2Q08AD1 1489 aa20.18■□□□□ 0.82
TRAPPC4-205ENST00000525079 ATP7AQ04656 1500 aa20.17■□□□□ 0.82
TRAPPC4-205ENST00000525079 INO80Q9ULG1 1556 aaPredicted RBP20.16■□□□□ 0.82
TRAPPC4-205ENST00000525079 AGLP35573 1532 aa20.13■□□□□ 0.81
TRAPPC4-205ENST00000525079 CEBPAP49715 358 aaPredicted RBP20.12■□□□□ 0.81
TRAPPC4-205ENST00000525079 MYOM3Q5VTT5 1437 aa20.1■□□□□ 0.81
TRAPPC4-205ENST00000525079 A2MP01023 1474 aa20.1■□□□□ 0.81
TRAPPC4-205ENST00000525079 CCDC141Q6ZP82 1450 aa20.1■□□□□ 0.81
TRAPPC4-205ENST00000525079 ESF1Q9H501 851 aaKnown RBP20.08■□□□□ 0.81
TRAPPC4-205ENST00000525079 RSPH4AQ5TD94 716 aa20.07■□□□□ 0.8
TRAPPC4-205ENST00000525079 RTEL1-TNFRSF6BF6WH68 1400 aa20.07■□□□□ 0.8
TRAPPC4-205ENST00000525079 ADGBQ8N7X0 1667 aa20.07■□□□□ 0.8
TRAPPC4-205ENST00000525079 ARHGEF5Q12774 1597 aa20.06■□□□□ 0.8
TRAPPC4-205ENST00000525079 MIA2Q96PC5 1412 aa20.06■□□□□ 0.8
TRAPPC4-205ENST00000525079 PLXNC1O60486 1568 aa20.05■□□□□ 0.8
TRAPPC4-205ENST00000525079 TSPY4P0CV99 314 aa20.05■□□□□ 0.8
TRAPPC4-205ENST00000525079 TSPY10P0CW01 314 aa20.05■□□□□ 0.8
TRAPPC4-205ENST00000525079 GGT6Q6P531 493 aa20.04■□□□□ 0.8
TRAPPC4-205ENST00000525079 LMTK3Q96Q04 1460 aa20.03■□□□□ 0.8
TRAPPC4-205ENST00000525079 DHX29Q7Z478 1369 aaKnown RBP20.01■□□□□ 0.79
TRAPPC4-205ENST00000525079 HSPA2P54652 639 aa20.01■□□□□ 0.79
TRAPPC4-205ENST00000525079 C3P01024 1663 aa20■□□□□ 0.79
TRAPPC4-205ENST00000525079 PTPN23Q9H3S7 1636 aa19.99■□□□□ 0.79
TRAPPC4-205ENST00000525079 KIF3BO15066 747 aa19.98■□□□□ 0.79
TRAPPC4-205ENST00000525079 FGD6Q6ZV73 1430 aa19.97■□□□□ 0.79
TRAPPC4-205ENST00000525079 CNTLNQ9NXG0 1405 aa19.97■□□□□ 0.79
TRAPPC4-205ENST00000525079 CLTCQ00610 1675 aaKnown RBP19.97■□□□□ 0.79
TRAPPC4-205ENST00000525079 PPARGC1BQ86YN6 1023 aaKnown RBP19.95■□□□□ 0.78
TRAPPC4-205ENST00000525079 MAST1Q9Y2H9 1570 aa19.95■□□□□ 0.78
TRAPPC4-205ENST00000525079 ZMYM3Q14202 1370 aa19.95■□□□□ 0.78
TRAPPC4-205ENST00000525079 PREX1Q8TCU6 1659 aa19.94■□□□□ 0.78
TRAPPC4-205ENST00000525079 ABCC5O15440 1437 aa19.93■□□□□ 0.78
TRAPPC4-205ENST00000525079 MROH2AA6NES4 1674 aa19.92■□□□□ 0.78
TRAPPC4-205ENST00000525079 TCOF1Q13428 1488 aaKnown RBP19.92■□□□□ 0.78
TRAPPC4-205ENST00000525079 PPP6R1Q9UPN7 881 aa19.9■□□□□ 0.78
TRAPPC4-205ENST00000525079 UHRF1BP1Q6BDS2 1440 aa19.9■□□□□ 0.78
TRAPPC4-205ENST00000525079 CROCC2H7BZ55 1655 aa19.89■□□□□ 0.77
TRAPPC4-205ENST00000525079 DAPK1P53355 1430 aa19.89■□□□□ 0.77
TRAPPC4-205ENST00000525079 FAM50AQ14320 339 aaKnown RBP19.89■□□□□ 0.77
TRAPPC4-205ENST00000525079 CHIC2Q9UKJ5 165 aa19.89■□□□□ 0.77
TRAPPC4-205ENST00000525079 SETD1BQ9UPS6 1966 aaKnown RBP19.88■□□□□ 0.77
TRAPPC4-205ENST00000525079 DNMT1P26358 1616 aaKnown RBP19.88■□□□□ 0.77
TRAPPC4-205ENST00000525079 RRP7BPQ9NSQ0 103 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms