RNA–Protein interactions for RNA: ENST00000525036.1

RB1-205, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 3

Gene RB1, Length 1,490 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-205ENST00000525036 ARHGAP5Q13017 1502 aa24.29■■□□□ 1.48
RB1-205ENST00000525036 EFCAB2Q5VUJ9 269 aa24.29■■□□□ 1.48
RB1-205ENST00000525036 PREX2Q70Z35 1606 aa24.28■■□□□ 1.48
RB1-205ENST00000525036 CFDP1Q9UEE9 299 aaPredicted RBP24.27■■□□□ 1.48
RB1-205ENST00000525036 ZNF777Q9ULD5 760 aaPredicted RBP24.27■■□□□ 1.48
RB1-205ENST00000525036 ZNF644Q9H582 1327 aaPredicted RBP24.26■■□□□ 1.47
RB1-205ENST00000525036 AKNAQ7Z591 1439 aa24.26■■□□□ 1.47
RB1-205ENST00000525036 ARAP3Q8WWN8 1544 aa24.25■■□□□ 1.47
RB1-205ENST00000525036 NEO1Q92859 1461 aa24.25■■□□□ 1.47
RB1-205ENST00000525036 MYOM3Q5VTT5 1437 aa24.21■■□□□ 1.47
RB1-205ENST00000525036 RAPGEF3O95398 923 aa24.2■■□□□ 1.47
RB1-205ENST00000525036 SAMD9LQ8IVG5 1584 aa24.19■■□□□ 1.46
RB1-205ENST00000525036 ARHGEF12Q9NZN5 1544 aa24.19■■□□□ 1.46
RB1-205ENST00000525036 SCAPERQ9BY12 1400 aa24.18■■□□□ 1.46
RB1-205ENST00000525036 ADGRL1O94910 1474 aa24.18■■□□□ 1.46
RB1-205ENST00000525036 HNRNPMP52272 730 aaKnown RBP eCLIP24.17■■□□□ 1.46
RB1-205ENST00000525036 ITSN2Q9NZM3 1697 aa24.17■■□□□ 1.46
RB1-205ENST00000525036 CFAP74Q9C0B2 1584 aa24.16■■□□□ 1.46
RB1-205ENST00000525036 KDM6BO15054 1643 aa24.16■■□□□ 1.46
RB1-205ENST00000525036 ABCC1P33527 1531 aa24.12■■□□□ 1.45
RB1-205ENST00000525036 FGD6Q6ZV73 1430 aa24.12■■□□□ 1.45
RB1-205ENST00000525036 TRAPPC8Q9Y2L5 1435 aa24.12■■□□□ 1.45
RB1-205ENST00000525036 AFAP1Q8N556 730 aa24.12■■□□□ 1.45
RB1-205ENST00000525036 MIA2Q96PC5 1412 aa24.12■■□□□ 1.45
RB1-205ENST00000525036 DENND4BO75064 1496 aaPredicted RBP24.11■■□□□ 1.45
RB1-205ENST00000525036 CAMSAP2Q08AD1 1489 aa24.11■■□□□ 1.45
RB1-205ENST00000525036 SYCP2Q9BX26 1530 aa24.1■■□□□ 1.45
RB1-205ENST00000525036 FRMPD1Q5SYB0 1578 aa24.1■■□□□ 1.45
RB1-205ENST00000525036 POGZQ7Z3K3 1410 aa24.08■■□□□ 1.44
RB1-205ENST00000525036 MBD5Q9P267 1494 aa24.07■■□□□ 1.44
RB1-205ENST00000525036 KIAA1107Q9UPP5 1409 aa24.07■■□□□ 1.44
RB1-205ENST00000525036 PTPN23Q9H3S7 1636 aa24.06■■□□□ 1.44
RB1-205ENST00000525036 RICTORQ6R327 1708 aa24.05■■□□□ 1.44
RB1-205ENST00000525036 PLEKHH2Q8IVE3 1493 aa24.04■■□□□ 1.44
RB1-205ENST00000525036 FAM50AQ14320 339 aaKnown RBP24.04■■□□□ 1.44
RB1-205ENST00000525036 TCOF1Q13428 1488 aaKnown RBP24.03■■□□□ 1.44
RB1-205ENST00000525036 ZNF518AQ6AHZ1 1483 aa23.99■■□□□ 1.43
RB1-205ENST00000525036 KDM5CP41229 1560 aa23.97■■□□□ 1.43
RB1-205ENST00000525036 RRBP1Q9P2E9 1410 aaKnown RBP23.96■■□□□ 1.43
RB1-205ENST00000525036 YEATS2Q9ULM3 1422 aa23.96■■□□□ 1.43
RB1-205ENST00000525036 ABCC5O15440 1437 aa23.95■■□□□ 1.42
RB1-205ENST00000525036 CCDC141Q6ZP82 1450 aa23.95■■□□□ 1.42
RB1-205ENST00000525036 ZMYM4Q5VZL5 1548 aa23.94■■□□□ 1.42
RB1-205ENST00000525036 SPAG9O60271 1321 aaKnown RBP23.94■■□□□ 1.42
RB1-205ENST00000525036 ARHGEF5Q12774 1597 aa23.94■■□□□ 1.42
RB1-205ENST00000525036 MYT1LQ9UL68 1186 aa23.93■■□□□ 1.42
RB1-205ENST00000525036 RSPH4AQ5TD94 716 aa23.91■■□□□ 1.42
RB1-205ENST00000525036 DAPK1P53355 1430 aa23.91■■□□□ 1.42
RB1-205ENST00000525036 MLH3Q9UHC1 1453 aa23.9■■□□□ 1.42
RB1-205ENST00000525036 ITGAEP38570 1179 aa23.9■■□□□ 1.42
RB1-205ENST00000525036 PTPRKQ15262 1439 aa23.9■■□□□ 1.42
RB1-205ENST00000525036 ZFYVE16Q7Z3T8 1539 aa23.89■■□□□ 1.41
RB1-205ENST00000525036 CHIC2Q9UKJ5 165 aa23.88■■□□□ 1.41
RB1-205ENST00000525036 HECW2Q9P2P5 1572 aa23.88■■□□□ 1.41
RB1-205ENST00000525036 DNMT1P26358 1616 aaKnown RBP23.88■■□□□ 1.41
RB1-205ENST00000525036 KIDINS220Q9ULH0 1771 aa23.88■■□□□ 1.41
RB1-205ENST00000525036 TSPY4P0CV99 314 aa23.87■■□□□ 1.41
RB1-205ENST00000525036 TSPY10P0CW01 314 aa23.87■■□□□ 1.41
RB1-205ENST00000525036 MAGI2Q86UL8 1455 aa23.87■■□□□ 1.41
RB1-205ENST00000525036 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.86■■□□□ 1.41
RB1-205ENST00000525036 INO80Q9ULG1 1556 aaPredicted RBP23.86■■□□□ 1.41
RB1-205ENST00000525036 ATP7AQ04656 1500 aa23.86■■□□□ 1.41
RB1-205ENST00000525036 C9orf84Q5VXU9 1444 aa23.85■■□□□ 1.41
RB1-205ENST00000525036 ARHGEF40Q8TER5 1519 aa23.84■■□□□ 1.41
RB1-205ENST00000525036 ABCA6Q8N139 1617 aa23.84■■□□□ 1.41
RB1-205ENST00000525036 RTEL1-TNFRSF6BF6WH68 1400 aa23.83■■□□□ 1.41
RB1-205ENST00000525036 DIP2CQ9Y2E4 1556 aa23.83■■□□□ 1.4
RB1-205ENST00000525036 CROCC2H7BZ55 1655 aa23.81■■□□□ 1.4
RB1-205ENST00000525036 ATP10AO60312 1499 aa23.81■■□□□ 1.4
RB1-205ENST00000525036 MAST1Q9Y2H9 1570 aa23.81■■□□□ 1.4
RB1-205ENST00000525036 SIGLEC1Q9BZZ2 1709 aa23.8■■□□□ 1.4
RB1-205ENST00000525036 SHANK2Q9UPX8 1470 aa23.79■■□□□ 1.4
RB1-205ENST00000525036 RRP7BPQ9NSQ0 103 aa23.79■■□□□ 1.4
RB1-205ENST00000525036 NCOA1Q15788 1441 aa23.74■■□□□ 1.39
RB1-205ENST00000525036 A2MP01023 1474 aa23.72■■□□□ 1.39
RB1-205ENST00000525036 ADGBQ8N7X0 1667 aa23.72■■□□□ 1.39
RB1-205ENST00000525036 ARID4BQ4LE39 1312 aaPredicted RBP23.71■■□□□ 1.39
RB1-205ENST00000525036 DHX29Q7Z478 1369 aaKnown RBP23.71■■□□□ 1.39
RB1-205ENST00000525036 ANKRD30AQ9BXX3 1397 aa23.71■■□□□ 1.39
RB1-205ENST00000525036 KIF15Q9NS87 1388 aa23.71■■□□□ 1.39
RB1-205ENST00000525036 ADGRL2O95490 1459 aa23.71■■□□□ 1.39
RB1-205ENST00000525036 PLXNC1O60486 1568 aa23.69■■□□□ 1.38
RB1-205ENST00000525036 MLECQ14165 292 aa23.68■■□□□ 1.38
RB1-205ENST00000525036 REREQ9P2R6 1566 aa23.67■■□□□ 1.38
RB1-205ENST00000525036 ROCK1Q13464 1354 aa23.66■■□□□ 1.38
RB1-205ENST00000525036 DUOX2Q9NRD8 1548 aa23.63■■□□□ 1.37
RB1-205ENST00000525036 AGLP35573 1532 aa23.63■■□□□ 1.37
RB1-205ENST00000525036 KIF3BO15066 747 aa23.62■■□□□ 1.37
RB1-205ENST00000525036 KDM4FA0A1W2PPD8 638 aa23.6■■□□□ 1.37
RB1-205ENST00000525036 GGT6Q6P531 493 aa23.59■■□□□ 1.37
RB1-205ENST00000525036 NAIPQ13075 1403 aa23.57■■□□□ 1.36
RB1-205ENST00000525036 ANKRD50Q9ULJ7 1429 aa23.57■■□□□ 1.36
RB1-205ENST00000525036 BCORL1Q5H9F3 1711 aa23.56■■□□□ 1.36
RB1-205ENST00000525036 ERBINQ96RT1 1412 aa23.56■■□□□ 1.36
RB1-205ENST00000525036 TRIM26Q12899 539 aaPredicted RBP23.55■■□□□ 1.36
RB1-205ENST00000525036 HFM1A2PYH4 1435 aa23.53■■□□□ 1.36
RB1-205ENST00000525036 ADAMTSL3P82987 1691 aa23.52■■□□□ 1.36
RB1-205ENST00000525036 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.51■■□□□ 1.35
RB1-205ENST00000525036 EIF2AK4Q9P2K8 1649 aaKnown RBP23.5■■□□□ 1.35
RB1-205ENST00000525036 MROH1Q8NDA8 1641 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 249 ms