RNA–Protein interactions for RNA: ENST00000525036.1

RB1-205, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 3

Gene RB1, Length 1,490 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-205ENST00000525036 NISCHQ9Y2I1 1504 aa37.31■■■■□ 3.56
RB1-205ENST00000525036 CCDC180Q9P1Z9 1646 aa32.87■■■□□ 2.85
RB1-205ENST00000525036 ABCC9O60706 1549 aa32.02■■■□□ 2.72
RB1-205ENST00000525036 DCAF8L2P0C7V8 631 aa31.16■■■□□ 2.58
RB1-205ENST00000525036 ZCCHC6Q5VYS8 1495 aaKnown RBP31.14■■■□□ 2.58
RB1-205ENST00000525036 NACADO15069 1562 aa30.87■■■□□ 2.53
RB1-205ENST00000525036 RB1CC1Q8TDY2 1594 aa30.81■■■□□ 2.52
RB1-205ENST00000525036 DCAF1Q9Y4B6 1507 aa30.79■■■□□ 2.52
RB1-205ENST00000525036 MYO15BQ96JP2 1530 aa30.75■■■□□ 2.51
RB1-205ENST00000525036 SCRIBQ14160 1630 aa30.18■■■□□ 2.42
RB1-205ENST00000525036 UNC13AQ9UPW8 1703 aa30.17■■■□□ 2.42
RB1-205ENST00000525036 PABPN1Q86U42 306 aaKnown RBP eCLIP30.07■■■□□ 2.4
RB1-205ENST00000525036 BICRAQ9NZM4 1560 aa29.98■■■□□ 2.39
RB1-205ENST00000525036 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
RB1-205ENST00000525036 DNAJC5BQ9UF47 199 aa29.19■■■□□ 2.26
RB1-205ENST00000525036 CECR2Q9BXF3 1484 aa29.13■■■□□ 2.25
RB1-205ENST00000525036 EIF4G1Q04637 1599 aaKnown RBP29.11■■■□□ 2.25
RB1-205ENST00000525036 CC2D2AQ9P2K1 1620 aa28.92■■■□□ 2.22
RB1-205ENST00000525036 SMARCA4P51532 1647 aa28.85■■■□□ 2.21
RB1-205ENST00000525036 MROH2BQ7Z745 1585 aa28.83■■■□□ 2.21
RB1-205ENST00000525036 BAZ1AQ9NRL2 1556 aaPredicted RBP28.83■■■□□ 2.21
RB1-205ENST00000525036 ATAD2BQ9ULI0 1458 aa28.65■■■□□ 2.18
RB1-205ENST00000525036 RSF1Q96T23 1441 aaPredicted RBP28.63■■■□□ 2.17
RB1-205ENST00000525036 NCAPD3P42695 1498 aa28.54■■■□□ 2.16
RB1-205ENST00000525036 SMARCA2P51531 1590 aa28.53■■■□□ 2.16
RB1-205ENST00000525036 PEG3Q9GZU2 1588 aa28.52■■■□□ 2.16
RB1-205ENST00000525036 WIZO95785 1651 aa28.52■■■□□ 2.16
RB1-205ENST00000525036 BAZ1BQ9UIG0 1483 aaKnown RBP28.39■■■□□ 2.13
RB1-205ENST00000525036 HMGXB3Q12766 1538 aa28.37■■■□□ 2.13
RB1-205ENST00000525036 SUPT5HO00267 1087 aaKnown RBP28.27■■■□□ 2.12
RB1-205ENST00000525036 TOP2AP11388 1531 aaKnown RBP28.16■■■□□ 2.1
RB1-205ENST00000525036 CCDC88BA6NC98 1476 aa27.92■■■□□ 2.06
RB1-205ENST00000525036 NESP48681 1621 aa27.85■■■□□ 2.05
RB1-205ENST00000525036 CADPSQ9ULU8 1353 aa27.75■■■□□ 2.03
RB1-205ENST00000525036 LAMC3Q9Y6N6 1575 aa27.65■■■□□ 2.02
RB1-205ENST00000525036 CFTRP13569 1480 aa27.65■■■□□ 2.02
RB1-205ENST00000525036 PDS5BQ9NTI5 1447 aa27.49■■□□□ 1.99
RB1-205ENST00000525036 ERCC6Q03468 1493 aa27.48■■□□□ 1.99
RB1-205ENST00000525036 KIF21AQ7Z4S6 1674 aa27.43■■□□□ 1.98
RB1-205ENST00000525036 FANCD2Q9BXW9 1451 aa27.43■■□□□ 1.98
RB1-205ENST00000525036 PRDM2Q13029 1718 aa27.34■■□□□ 1.97
RB1-205ENST00000525036 CEP164Q9UPV0 1460 aa27.32■■□□□ 1.96
RB1-205ENST00000525036 THOC2Q8NI27 1593 aaKnown RBP27.23■■□□□ 1.95
RB1-205ENST00000525036 MRC2Q9UBG0 1479 aa27.21■■□□□ 1.95
RB1-205ENST00000525036 URB2Q14146 1524 aaKnown RBP27.17■■□□□ 1.94
RB1-205ENST00000525036 WDR62O43379 1518 aa27.1■■□□□ 1.93
RB1-205ENST00000525036 TOPBP1Q92547 1522 aa27.04■■□□□ 1.92
RB1-205ENST00000525036 ABCC8Q09428 1581 aa27.03■■□□□ 1.92
RB1-205ENST00000525036 CUX1P39880 1505 aa27.01■■□□□ 1.91
RB1-205ENST00000525036 CUX2O14529 1486 aa27■■□□□ 1.91
RB1-205ENST00000525036 DNMBPQ6XZF7 1577 aa26.98■■□□□ 1.91
RB1-205ENST00000525036 WRNQ14191 1432 aaPredicted RBP eCLIP26.93■■□□□ 1.9
RB1-205ENST00000525036 SYNJ1O43426 1573 aa26.88■■□□□ 1.89
RB1-205ENST00000525036 POLA1P09884 1462 aaPredicted RBP26.84■■□□□ 1.89
RB1-205ENST00000525036 FGD5Q6ZNL6 1462 aa26.83■■□□□ 1.89
RB1-205ENST00000525036 TOP2BQ02880 1626 aa26.8■■□□□ 1.88
RB1-205ENST00000525036 RAD54L2Q9Y4B4 1467 aa26.79■■□□□ 1.88
RB1-205ENST00000525036 BIVM-ERCC5R4GMW8 1640 aa26.78■■□□□ 1.88
RB1-205ENST00000525036 SOGA1O94964 1423 aa26.74■■□□□ 1.87
RB1-205ENST00000525036 IFT140Q96RY7 1462 aa26.73■■□□□ 1.87
RB1-205ENST00000525036 TARBP1Q13395 1621 aaKnown RBP26.71■■□□□ 1.87
RB1-205ENST00000525036 ZNF608Q9ULD9 1512 aaPredicted RBP26.69■■□□□ 1.86
RB1-205ENST00000525036 TDRD9Q8NDG6 1382 aaKnown RBP26.61■■□□□ 1.85
RB1-205ENST00000525036 TRIM41Q8WV44 630 aa26.61■■□□□ 1.85
RB1-205ENST00000525036 AQRO60306 1485 aaKnown RBP eCLIP26.59■■□□□ 1.85
RB1-205ENST00000525036 CHIC1Q5VXU3 224 aa26.59■■□□□ 1.85
RB1-205ENST00000525036 ABCA10Q8WWZ4 1543 aa26.55■■□□□ 1.84
RB1-205ENST00000525036 WDR97A6NE52 1622 aa26.53■■□□□ 1.84
RB1-205ENST00000525036 EIF4G3O43432 1585 aaKnown RBP26.5■■□□□ 1.83
RB1-205ENST00000525036 GAPVD1Q14C86 1478 aa26.41■■□□□ 1.82
RB1-205ENST00000525036 ABCA5Q8WWZ7 1642 aa26.4■■□□□ 1.82
RB1-205ENST00000525036 RUSC2Q8N2Y8 1516 aa26.36■■□□□ 1.81
RB1-205ENST00000525036 GRIN2BQ13224 1484 aa26.34■■□□□ 1.81
RB1-205ENST00000525036 KIF27Q86VH2 1401 aa26.31■■□□□ 1.8
RB1-205ENST00000525036 SNAPC4Q5SXM2 1469 aa26.29■■□□□ 1.8
RB1-205ENST00000525036 PBRM1Q86U86 1689 aa26.29■■□□□ 1.8
RB1-205ENST00000525036 IGF1RP08069 1367 aa26.25■■□□□ 1.79
RB1-205ENST00000525036 ERICH3Q5RHP9 1530 aa26.21■■□□□ 1.79
RB1-205ENST00000525036 FBLN2P98095 1184 aa26.2■■□□□ 1.78
RB1-205ENST00000525036 MAGI1Q96QZ7 1491 aaPredicted RBP26.19■■□□□ 1.78
RB1-205ENST00000525036 FAM9AQ8IZU1 332 aaPredicted RBP26.16■■□□□ 1.78
RB1-205ENST00000525036 ADAMTS12P58397 1594 aa26.13■■□□□ 1.77
RB1-205ENST00000525036 CHMP7Q8WUX9 453 aaPredicted RBP26.12■■□□□ 1.77
RB1-205ENST00000525036 SYNJ2O15056 1496 aa26.11■■□□□ 1.77
RB1-205ENST00000525036 FHAD1B1AJZ9 1412 aa26.1■■□□□ 1.77
RB1-205ENST00000525036 CHD1O14646 1710 aa26.09■■□□□ 1.77
RB1-205ENST00000525036 CARMIL1Q5VZK9 1371 aa26.07■■□□□ 1.76
RB1-205ENST00000525036 CSRNP3Q8WYN3 585 aa26.04■■□□□ 1.76
RB1-205ENST00000525036 OSCARQ8IYS5 282 aa26.04■■□□□ 1.76
RB1-205ENST00000525036 GRIN2AQ12879 1464 aa26.02■■□□□ 1.76
RB1-205ENST00000525036 CUL7Q14999 1698 aa26■■□□□ 1.75
RB1-205ENST00000525036 EEA1Q15075 1411 aa25.99■■□□□ 1.75
RB1-205ENST00000525036 PRXQ9BXM0 1461 aa25.94■■□□□ 1.74
RB1-205ENST00000525036 RAPGEF2Q9Y4G8 1499 aa25.91■■□□□ 1.74
RB1-205ENST00000525036 CEP170Q5SW79 1584 aa25.9■■□□□ 1.74
RB1-205ENST00000525036 NUP160Q12769 1436 aa25.89■■□□□ 1.73
RB1-205ENST00000525036 DNAJC5Q9H3Z4 198 aa25.86■■□□□ 1.73
RB1-205ENST00000525036 EHMT2Q96KQ7 1210 aa25.85■■□□□ 1.73
RB1-205ENST00000525036 CLASP1Q7Z460 1538 aa25.83■■□□□ 1.73
RB1-205ENST00000525036 KIF21BO75037 1637 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms