RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 ADAMTS12P58397 1594 aa18.05■□□□□ 0.48
CAPN1-202ENST00000524773 MPHOSPH9Q99550 1183 aa18.05■□□□□ 0.48
CAPN1-202ENST00000524773 DENND4BO75064 1496 aaPredicted RBP18.04■□□□□ 0.48
CAPN1-202ENST00000524773 AKNAQ7Z591 1439 aa18.03■□□□□ 0.48
CAPN1-202ENST00000524773 KDM6BO15054 1643 aa18.02■□□□□ 0.48
CAPN1-202ENST00000524773 SNAPC4Q5SXM2 1469 aa18.02■□□□□ 0.48
CAPN1-202ENST00000524773 MYOM3Q5VTT5 1437 aa18.02■□□□□ 0.48
CAPN1-202ENST00000524773 CNTLNQ9NXG0 1405 aa18.02■□□□□ 0.48
CAPN1-202ENST00000524773 EIF4G3O43432 1585 aaKnown RBP18.01■□□□□ 0.47
CAPN1-202ENST00000524773 CCDC7Q96M83 1385 aa18.01■□□□□ 0.47
CAPN1-202ENST00000524773 KIF7Q2M1P5 1343 aa17.98■□□□□ 0.47
CAPN1-202ENST00000524773 LRRIQ1Q96JM4 1722 aa17.97■□□□□ 0.47
CAPN1-202ENST00000524773 NOP58Q9Y2X3 529 aaKnown RBP17.97■□□□□ 0.47
CAPN1-202ENST00000524773 ZBED9Q6R2W3 1325 aa17.96■□□□□ 0.47
CAPN1-202ENST00000524773 SAMD9Q5K651 1589 aa17.95■□□□□ 0.46
CAPN1-202ENST00000524773 SALL2Q9Y467 1007 aaPredicted RBP17.95■□□□□ 0.46
CAPN1-202ENST00000524773 MAGI3Q5TCQ9 1506 aa17.95■□□□□ 0.46
CAPN1-202ENST00000524773 ZNF644Q9H582 1327 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-202ENST00000524773 IQGAP2Q13576 1575 aa17.93■□□□□ 0.46
CAPN1-202ENST00000524773 CCDC136Q96JN2 1154 aa17.93■□□□□ 0.46
CAPN1-202ENST00000524773 CHMP7Q8WUX9 453 aaPredicted RBP17.92■□□□□ 0.46
CAPN1-202ENST00000524773 NCOA1Q15788 1441 aa17.92■□□□□ 0.46
CAPN1-202ENST00000524773 NPM2Q86SE8 214 aaKnown RBP17.91■□□□□ 0.46
CAPN1-202ENST00000524773 MAGI1Q96QZ7 1491 aaPredicted RBP17.91■□□□□ 0.46
CAPN1-202ENST00000524773 SLC4A1APQ9BWU0 796 aaKnown RBP17.91■□□□□ 0.46
CAPN1-202ENST00000524773 FBLN2P98095 1184 aa17.9■□□□□ 0.46
CAPN1-202ENST00000524773 GRIN2AQ12879 1464 aa17.9■□□□□ 0.46
CAPN1-202ENST00000524773 ERICH6BQ5W0A0 696 aa17.88■□□□□ 0.45
CAPN1-202ENST00000524773 KIAA0586Q9BVV6 1533 aa17.87■□□□□ 0.45
CAPN1-202ENST00000524773 SYNJ2O15056 1496 aa17.86■□□□□ 0.45
CAPN1-202ENST00000524773 CDK13Q14004 1512 aaKnown RBP17.84■□□□□ 0.45
CAPN1-202ENST00000524773 SUPT6HQ7KZ85 1726 aaKnown RBP17.84■□□□□ 0.45
CAPN1-202ENST00000524773 EHBP1L1Q8N3D4 1523 aa17.84■□□□□ 0.45
CAPN1-202ENST00000524773 UGGT2Q9NYU1 1516 aa17.83■□□□□ 0.44
CAPN1-202ENST00000524773 SKAP1Q86WV1 359 aa17.83■□□□□ 0.44
CAPN1-202ENST00000524773 NUDCQ9Y266 331 aa17.82■□□□□ 0.44
CAPN1-202ENST00000524773 ANKRD30BQ9BXX2 1392 aa17.81■□□□□ 0.44
CAPN1-202ENST00000524773 RTN4Q9NQC3 1192 aaKnown RBP17.81■□□□□ 0.44
CAPN1-202ENST00000524773 ANP32AP39687 249 aaKnown RBP17.8■□□□□ 0.44
CAPN1-202ENST00000524773 ZNF777Q9ULD5 760 aaPredicted RBP17.8■□□□□ 0.44
CAPN1-202ENST00000524773 LAS1LQ9Y4W2 734 aaKnown RBP17.79■□□□□ 0.44
CAPN1-202ENST00000524773 TMC1Q8TDI8 760 aa17.78■□□□□ 0.44
CAPN1-202ENST00000524773 IPO9Q96P70 1041 aaKnown RBP17.78■□□□□ 0.44
CAPN1-202ENST00000524773 ZBTB47Q9UFB7 747 aaPredicted RBP17.78■□□□□ 0.44
CAPN1-202ENST00000524773 ARHGEF11O15085 1522 aa17.78■□□□□ 0.44
CAPN1-202ENST00000524773 KDM2AQ9Y2K7 1162 aa17.78■□□□□ 0.44
CAPN1-202ENST00000524773 CEP170Q5SW79 1584 aa17.77■□□□□ 0.43
CAPN1-202ENST00000524773 DHX29Q7Z478 1369 aaKnown RBP17.76■□□□□ 0.43
CAPN1-202ENST00000524773 SPATA31E1Q6ZUB1 1445 aa17.76■□□□□ 0.43
CAPN1-202ENST00000524773 EXOC6Q8TAG9 804 aa17.76■□□□□ 0.43
CAPN1-202ENST00000524773 TCOF1Q13428 1488 aaKnown RBP17.76■□□□□ 0.43
CAPN1-202ENST00000524773 HECW1Q76N89 1606 aa17.75■□□□□ 0.43
CAPN1-202ENST00000524773 SMG6Q86US8 1419 aaKnown RBP17.75■□□□□ 0.43
CAPN1-202ENST00000524773 DISP1Q96F81 1524 aa17.75■□□□□ 0.43
CAPN1-202ENST00000524773 TEX14Q8IWB6 1497 aa17.74■□□□□ 0.43
CAPN1-202ENST00000524773 RPRD2Q5VT52 1461 aaKnown RBP17.74■□□□□ 0.43
CAPN1-202ENST00000524773 IL27Q8NEV9 243 aa17.73■□□□□ 0.43
CAPN1-202ENST00000524773 USP47Q96K76 1375 aa17.73■□□□□ 0.43
CAPN1-202ENST00000524773 KIAA0556O60303 1618 aa17.73■□□□□ 0.43
CAPN1-202ENST00000524773 NUP160Q12769 1436 aa17.73■□□□□ 0.43
CAPN1-202ENST00000524773 RTL5Q5HYW3 569 aaPredicted RBP17.73■□□□□ 0.43
CAPN1-202ENST00000524773 PNISRQ8TF01 805 aaKnown RBP17.73■□□□□ 0.43
CAPN1-202ENST00000524773 ANO8Q9HCE9 1232 aaPredicted RBP17.72■□□□□ 0.43
CAPN1-202ENST00000524773 EPRSP07814 1512 aaKnown RBP17.72■□□□□ 0.43
CAPN1-202ENST00000524773 JPH4Q96JJ6 628 aa17.72■□□□□ 0.43
CAPN1-202ENST00000524773 GCC2Q8IWJ2 1684 aa17.71■□□□□ 0.43
CAPN1-202ENST00000524773 PKD2Q13563 968 aa17.7■□□□□ 0.42
CAPN1-202ENST00000524773 MIA2Q96PC5 1412 aa17.7■□□□□ 0.42
CAPN1-202ENST00000524773 PLIN1O60240 522 aa17.7■□□□□ 0.42
CAPN1-202ENST00000524773 ABCC5O15440 1437 aa17.69■□□□□ 0.42
CAPN1-202ENST00000524773 DAPK1P53355 1430 aa17.69■□□□□ 0.42
CAPN1-202ENST00000524773 BCORL1Q5H9F3 1711 aa17.67■□□□□ 0.42
CAPN1-202ENST00000524773 CARMIL2Q6F5E8 1435 aa17.67■□□□□ 0.42
CAPN1-202ENST00000524773 CDCA7LQ96GN5 454 aa17.67■□□□□ 0.42
CAPN1-202ENST00000524773 ST20-MTHFSA0A0A6YYL1 179 aa17.66■□□□□ 0.42
CAPN1-202ENST00000524773 CARD11Q9BXL7 1154 aa17.66■□□□□ 0.42
CAPN1-202ENST00000524773 MYT1LQ9UL68 1186 aa17.66■□□□□ 0.42
CAPN1-202ENST00000524773 RNF123Q5XPI4 1314 aa17.66■□□□□ 0.42
CAPN1-202ENST00000524773 RRP1P56182 461 aaKnown RBP17.63■□□□□ 0.41
CAPN1-202ENST00000524773 NEFMP07197 916 aa17.62■□□□□ 0.41
CAPN1-202ENST00000524773 PDE4AP27815 886 aa17.61■□□□□ 0.41
CAPN1-202ENST00000524773 SLC4A3P48751 1232 aa17.61■□□□□ 0.41
CAPN1-202ENST00000524773 CFDP1Q9UEE9 299 aaPredicted RBP17.61■□□□□ 0.41
CAPN1-202ENST00000524773 RCAN3Q9UKA8 241 aa17.6■□□□□ 0.41
CAPN1-202ENST00000524773 RAPGEF6Q8TEU7 1601 aa17.6■□□□□ 0.41
CAPN1-202ENST00000524773 ROCK1Q13464 1354 aa17.6■□□□□ 0.41
CAPN1-202ENST00000524773 PZPP20742 1482 aa17.59■□□□□ 0.41
CAPN1-202ENST00000524773 CHD1O14646 1710 aa17.59■□□□□ 0.41
CAPN1-202ENST00000524773 NUP153P49790 1475 aaKnown RBP17.59■□□□□ 0.41
CAPN1-202ENST00000524773 DCAF11Q8TEB1 546 aa17.59■□□□□ 0.41
CAPN1-202ENST00000524773 CC2D1BQ5T0F9 858 aaKnown RBP17.57■□□□□ 0.4
CAPN1-202ENST00000524773 PLB1Q6P1J6 1458 aa17.57■□□□□ 0.4
CAPN1-202ENST00000524773 PRG4Q92954 1404 aaPredicted RBP17.57■□□□□ 0.4
CAPN1-202ENST00000524773 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.56■□□□□ 0.4
CAPN1-202ENST00000524773 RGL3Q3MIN7 710 aa17.55■□□□□ 0.4
CAPN1-202ENST00000524773 C20orf194Q5TEA3 1177 aa17.52■□□□□ 0.4
CAPN1-202ENST00000524773 BACH2Q9BYV9 841 aa17.52■□□□□ 0.39
CAPN1-202ENST00000524773 MYBBP1AQ9BQG0 1328 aaKnown RBP17.51■□□□□ 0.39
CAPN1-202ENST00000524773 PRKCSHP14314 528 aaPredicted RBP17.51■□□□□ 0.39
CAPN1-202ENST00000524773 CRBNQ96SW2 442 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms