RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 NUP153P49790 1475 aaKnown RBP24.97■■□□□ 1.59
IKBKB-228ENST00000523517 FOXD1Q16676 465 aa24.96■■□□□ 1.59
IKBKB-228ENST00000523517 CDK11AQ9UQ88 783 aaPredicted RBP24.94■■□□□ 1.58
IKBKB-228ENST00000523517 ANKRD30BQ9BXX2 1392 aa24.93■■□□□ 1.58
IKBKB-228ENST00000523517 ZNF644Q9H582 1327 aaPredicted RBP24.93■■□□□ 1.58
IKBKB-228ENST00000523517 DNMT1P26358 1616 aaKnown RBP24.91■■□□□ 1.58
IKBKB-228ENST00000523517 GRIN2AQ12879 1464 aa24.91■■□□□ 1.58
IKBKB-228ENST00000523517 RAPGEF6Q8TEU7 1601 aa24.89■■□□□ 1.58
IKBKB-228ENST00000523517 RPRD2Q5VT52 1461 aaKnown RBP24.89■■□□□ 1.58
IKBKB-228ENST00000523517 CNTLNQ9NXG0 1405 aa24.86■■□□□ 1.57
IKBKB-228ENST00000523517 HNRNPUQ00839 825 aaKnown RBP eCLIP24.85■■□□□ 1.57
IKBKB-228ENST00000523517 SLC4A1APQ9BWU0 796 aaKnown RBP24.85■■□□□ 1.57
IKBKB-228ENST00000523517 NCOA1Q15788 1441 aa24.84■■□□□ 1.57
IKBKB-228ENST00000523517 NBPF8Q3BBV2 869 aa24.83■■□□□ 1.57
IKBKB-228ENST00000523517 TROQ12816 1431 aaPredicted RBP24.83■■□□□ 1.57
IKBKB-228ENST00000523517 TEX14Q8IWB6 1497 aa24.83■■□□□ 1.57
IKBKB-228ENST00000523517 PRG4Q92954 1404 aaPredicted RBP24.82■■□□□ 1.56
IKBKB-228ENST00000523517 CCDC7Q96M83 1385 aa24.82■■□□□ 1.56
IKBKB-228ENST00000523517 EIF4G3O43432 1585 aaKnown RBP24.82■■□□□ 1.56
IKBKB-228ENST00000523517 C11orf95C9JLR9 678 aaPredicted RBP24.82■■□□□ 1.56
IKBKB-228ENST00000523517 CFDP1Q9UEE9 299 aaPredicted RBP24.79■■□□□ 1.56
IKBKB-228ENST00000523517 CAMSAP2Q08AD1 1489 aa24.77■■□□□ 1.56
IKBKB-228ENST00000523517 MAGI1Q96QZ7 1491 aaPredicted RBP24.77■■□□□ 1.56
IKBKB-228ENST00000523517 CHMP7Q8WUX9 453 aaPredicted RBP24.76■■□□□ 1.55
IKBKB-228ENST00000523517 PLB1Q6P1J6 1458 aa24.75■■□□□ 1.55
IKBKB-228ENST00000523517 GPATCH8Q9UKJ3 1502 aaKnown RBP24.75■■□□□ 1.55
IKBKB-228ENST00000523517 PZPP20742 1482 aa24.75■■□□□ 1.55
IKBKB-228ENST00000523517 SPATA31E1Q6ZUB1 1445 aa24.74■■□□□ 1.55
IKBKB-228ENST00000523517 PRKRIP1Q9H875 184 aaPredicted RBP24.74■■□□□ 1.55
IKBKB-228ENST00000523517 SYNJ2O15056 1496 aa24.72■■□□□ 1.55
IKBKB-228ENST00000523517 CCDC184Q52MB2 194 aa24.72■■□□□ 1.55
IKBKB-228ENST00000523517 CEP170Q5SW79 1584 aa24.71■■□□□ 1.55
IKBKB-228ENST00000523517 KIF7Q2M1P5 1343 aa24.69■■□□□ 1.54
IKBKB-228ENST00000523517 ADGRL2O95490 1459 aa24.69■■□□□ 1.54
IKBKB-228ENST00000523517 ZNF777Q9ULD5 760 aaPredicted RBP24.69■■□□□ 1.54
IKBKB-228ENST00000523517 CARMIL2Q6F5E8 1435 aa24.68■■□□□ 1.54
IKBKB-228ENST00000523517 ITSN2Q9NZM3 1697 aa24.68■■□□□ 1.54
IKBKB-228ENST00000523517 KIAA1107Q9UPP5 1409 aa24.67■■□□□ 1.54
IKBKB-228ENST00000523517 ERCC6Q03468 1493 aa24.66■■□□□ 1.54
IKBKB-228ENST00000523517 JPH4Q96JJ6 628 aa24.66■■□□□ 1.54
IKBKB-228ENST00000523517 ADCY10Q96PN6 1610 aa24.66■■□□□ 1.54
IKBKB-228ENST00000523517 KIF14Q15058 1648 aa24.66■■□□□ 1.54
IKBKB-228ENST00000523517 FBLN2P98095 1184 aa24.65■■□□□ 1.54
IKBKB-228ENST00000523517 ANKRD30AQ9BXX3 1397 aa24.65■■□□□ 1.54
IKBKB-228ENST00000523517 ADGBQ8N7X0 1667 aa24.63■■□□□ 1.53
IKBKB-228ENST00000523517 NUP160Q12769 1436 aa24.63■■□□□ 1.53
IKBKB-228ENST00000523517 MRS2Q9HD23 443 aa24.63■■□□□ 1.53
IKBKB-228ENST00000523517 MBD5Q9P267 1494 aa24.62■■□□□ 1.53
IKBKB-228ENST00000523517 PKD2Q13563 968 aa24.61■■□□□ 1.53
IKBKB-228ENST00000523517 RBM19Q9Y4C8 960 aaKnown RBP24.61■■□□□ 1.53
IKBKB-228ENST00000523517 FAM9BQ8IZU0 186 aa24.6■■□□□ 1.53
IKBKB-228ENST00000523517 ANKRD50Q9ULJ7 1429 aa24.58■■□□□ 1.53
IKBKB-228ENST00000523517 PLEKHD1A6NEE1 506 aa24.58■■□□□ 1.53
IKBKB-228ENST00000523517 CROCC2H7BZ55 1655 aa24.58■■□□□ 1.53
IKBKB-228ENST00000523517 IRX6P78412 446 aaPredicted RBP24.57■■□□□ 1.52
IKBKB-228ENST00000523517 ANP32EQ9BTT0 268 aa24.56■■□□□ 1.52
IKBKB-228ENST00000523517 ERICH6BQ5W0A0 696 aa24.55■■□□□ 1.52
IKBKB-228ENST00000523517 ZBED9Q6R2W3 1325 aa24.55■■□□□ 1.52
IKBKB-228ENST00000523517 USP47Q96K76 1375 aa24.54■■□□□ 1.52
IKBKB-228ENST00000523517 ABCC10Q5T3U5 1492 aa24.53■■□□□ 1.52
IKBKB-228ENST00000523517 ABCA8O94911 1581 aa24.53■■□□□ 1.52
IKBKB-228ENST00000523517 POLR1AO95602 1720 aaPredicted RBP24.52■■□□□ 1.52
IKBKB-228ENST00000523517 ATP10BO94823 1461 aa24.52■■□□□ 1.52
IKBKB-228ENST00000523517 SHANK2Q9UPX8 1470 aa24.52■■□□□ 1.52
IKBKB-228ENST00000523517 ZNF326Q5BKZ1 582 aaKnown RBP24.52■■□□□ 1.52
IKBKB-228ENST00000523517 C9orf84Q5VXU9 1444 aa24.51■■□□□ 1.51
IKBKB-228ENST00000523517 NUP155O75694 1391 aa24.5■■□□□ 1.51
IKBKB-228ENST00000523517 DHX29Q7Z478 1369 aaKnown RBP24.5■■□□□ 1.51
IKBKB-228ENST00000523517 ARID4BQ4LE39 1312 aaPredicted RBP24.48■■□□□ 1.51
IKBKB-228ENST00000523517 UHRF1BP1Q6BDS2 1440 aa24.47■■□□□ 1.51
IKBKB-228ENST00000523517 TSPY4P0CV99 314 aa24.46■■□□□ 1.51
IKBKB-228ENST00000523517 TSPY10P0CW01 314 aa24.46■■□□□ 1.51
IKBKB-228ENST00000523517 PPP4R2Q9NY27 417 aa24.45■■□□□ 1.5
IKBKB-228ENST00000523517 CDC42BPAQ5VT25 1732 aa24.45■■□□□ 1.5
IKBKB-228ENST00000523517 KDM5CP41229 1560 aa24.43■■□□□ 1.5
IKBKB-228ENST00000523517 BCORL1Q5H9F3 1711 aa24.43■■□□□ 1.5
IKBKB-228ENST00000523517 RALGAPBQ86X10 1494 aa24.42■■□□□ 1.5
IKBKB-228ENST00000523517 KDM5DQ9BY66 1539 aa24.42■■□□□ 1.5
IKBKB-228ENST00000523517 POLR3GLQ9BT43 218 aa24.42■■□□□ 1.5
IKBKB-228ENST00000523517 ARHGEF12Q9NZN5 1544 aa24.4■■□□□ 1.5
IKBKB-228ENST00000523517 KIF15Q9NS87 1388 aa24.4■■□□□ 1.5
IKBKB-228ENST00000523517 HNRNPMP52272 730 aaKnown RBP eCLIP24.39■■□□□ 1.53e-7■■■■□ 24.6
IKBKB-228ENST00000523517 PTPRGP23470 1445 aa24.38■■□□□ 1.49
IKBKB-228ENST00000523517 CARD11Q9BXL7 1154 aa24.38■■□□□ 1.49
IKBKB-228ENST00000523517 ROCK2O75116 1388 aaKnown RBP24.38■■□□□ 1.49
IKBKB-228ENST00000523517 ARHGEF5Q12774 1597 aa24.36■■□□□ 1.49
IKBKB-228ENST00000523517 CNGB1Q14028 1251 aaPredicted RBP24.34■■□□□ 1.49
IKBKB-228ENST00000523517 SMG6Q86US8 1419 aaKnown RBP24.32■■□□□ 1.48
IKBKB-228ENST00000523517 KDM2AQ9Y2K7 1162 aa24.32■■□□□ 1.48
IKBKB-228ENST00000523517 DCAF11Q8TEB1 546 aa24.3■■□□□ 1.48
IKBKB-228ENST00000523517 CCDC141Q6ZP82 1450 aa24.3■■□□□ 1.48
IKBKB-228ENST00000523517 RSPH4AQ5TD94 716 aa24.29■■□□□ 1.48
IKBKB-228ENST00000523517 ST20-MTHFSA0A0A6YYL1 179 aa24.28■■□□□ 1.48
IKBKB-228ENST00000523517 FANCIQ9NVI1 1328 aa24.27■■□□□ 1.48
IKBKB-228ENST00000523517 PNISRQ8TF01 805 aaKnown RBP24.27■■□□□ 1.48
IKBKB-228ENST00000523517 B4GALNT3Q6L9W6 998 aa24.27■■□□□ 1.48
IKBKB-228ENST00000523517 SAMD9LQ8IVG5 1584 aa24.26■■□□□ 1.47
IKBKB-228ENST00000523517 NUDCQ9Y266 331 aa24.25■■□□□ 1.47
IKBKB-228ENST00000523517 TMC1Q8TDI8 760 aa24.24■■□□□ 1.47
IKBKB-228ENST00000523517 FAM135AQ9P2D6 1515 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms