RNA–Protein interactions for RNA: ENST00000522953.5

NPM2-211, Transcript of nucleophosmin/nucleoplasmin 2, humanhuman

TSL 3

Gene NPM2, Length 373 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM2-211ENST00000522953 UBAP1LF5GYI3 381 aa13.26□□□□□ -0.29
NPM2-211ENST00000522953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.25□□□□□ -0.29
NPM2-211ENST00000522953 HNRNPUL2Q1KMD3 747 aaKnown RBP13.25□□□□□ -0.29
NPM2-211ENST00000522953 RAPGEF6Q8TEU7 1601 aa13.23□□□□□ -0.29
NPM2-211ENST00000522953 ZNF335Q9H4Z2 1342 aaPredicted RBP13.22□□□□□ -0.29
NPM2-211ENST00000522953 C3P01024 1663 aa13.21□□□□□ -0.29
NPM2-211ENST00000522953 CFAP74Q9C0B2 1584 aa13.21□□□□□ -0.29
NPM2-211ENST00000522953 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.2□□□□□ -0.3
NPM2-211ENST00000522953 HSPA1LP34931 641 aa13.2□□□□□ -0.3
NPM2-211ENST00000522953 NCOA1Q15788 1441 aa13.19□□□□□ -0.3
NPM2-211ENST00000522953 ATP10AO60312 1499 aa13.18□□□□□ -0.3
NPM2-211ENST00000522953 MAGI2Q86UL8 1455 aa13.18□□□□□ -0.3
NPM2-211ENST00000522953 C9orf84Q5VXU9 1444 aa13.18□□□□□ -0.3
NPM2-211ENST00000522953 NUP153P49790 1475 aaKnown RBP13.17□□□□□ -0.3
NPM2-211ENST00000522953 SCAF1Q9H7N4 1312 aaKnown RBP13.16□□□□□ -0.3
NPM2-211ENST00000522953 SCAPERQ9BY12 1400 aa13.16□□□□□ -0.3
NPM2-211ENST00000522953 CAMSAP1Q5T5Y3 1602 aa13.16□□□□□ -0.3
NPM2-211ENST00000522953 NCKAP5LQ9HCH0 1330 aa13.15□□□□□ -0.3
NPM2-211ENST00000522953 SETD1BQ9UPS6 1966 aaKnown RBP13.14□□□□□ -0.31
NPM2-211ENST00000522953 PIP4K2BP78356 416 aa13.14□□□□□ -0.31
NPM2-211ENST00000522953 PHF23Q9BUL5 403 aaPredicted RBP13.13□□□□□ -0.31
NPM2-211ENST00000522953 SAMD9Q5K651 1589 aa13.12□□□□□ -0.31
NPM2-211ENST00000522953 SENP3Q9H4L4 574 aaPredicted RBP13.11□□□□□ -0.31
NPM2-211ENST00000522953 DIP2CQ9Y2E4 1556 aa13.09□□□□□ -0.31
NPM2-211ENST00000522953 TRAPPC8Q9Y2L5 1435 aa13.08□□□□□ -0.32
NPM2-211ENST00000522953 PLEKHD1A6NEE1 506 aa13.08□□□□□ -0.32
NPM2-211ENST00000522953 ABCA6Q8N139 1617 aa13.07□□□□□ -0.32
NPM2-211ENST00000522953 PRXQ9BXM0 1461 aa13.06□□□□□ -0.32
NPM2-211ENST00000522953 RANGAP1P46060 587 aaPredicted RBP13.06□□□□□ -0.32
NPM2-211ENST00000522953 FAM9AQ8IZU1 332 aaPredicted RBP13.06□□□□□ -0.32
NPM2-211ENST00000522953 CDK13Q14004 1512 aaKnown RBP13.05□□□□□ -0.32
NPM2-211ENST00000522953 ALKQ9UM73 1620 aa13.04□□□□□ -0.32
NPM2-211ENST00000522953 AFAP1Q8N556 730 aa13.04□□□□□ -0.32
NPM2-211ENST00000522953 SUPT6HQ7KZ85 1726 aaKnown RBP13.04□□□□□ -0.32
NPM2-211ENST00000522953 PLCH2O75038 1416 aa13.04□□□□□ -0.32
NPM2-211ENST00000522953 RGS17Q9UGC6 210 aaPredicted RBP13.03□□□□□ -0.32
NPM2-211ENST00000522953 MYT1LQ9UL68 1186 aa13.03□□□□□ -0.32
NPM2-211ENST00000522953 KDM5CP41229 1560 aa13.03□□□□□ -0.32
NPM2-211ENST00000522953 MYO5CQ9NQX4 1742 aa13.02□□□□□ -0.33
NPM2-211ENST00000522953 MYO3AQ8NEV4 1616 aa13.01□□□□□ -0.33
NPM2-211ENST00000522953 REREQ9P2R6 1566 aa13□□□□□ -0.33
NPM2-211ENST00000522953 ESF1Q9H501 851 aaKnown RBP13□□□□□ -0.33
NPM2-211ENST00000522953 ZNF142P52746 1687 aaPredicted RBP12.99□□□□□ -0.33
NPM2-211ENST00000522953 TCOF1Q13428 1488 aaKnown RBP12.99□□□□□ -0.33
NPM2-211ENST00000522953 ZNF518AQ6AHZ1 1483 aa12.99□□□□□ -0.33
NPM2-211ENST00000522953 SETD1AO15047 1707 aaKnown RBP12.99□□□□□ -0.33
NPM2-211ENST00000522953 KIF14Q15058 1648 aa12.98□□□□□ -0.33
NPM2-211ENST00000522953 AGLP35573 1532 aa12.98□□□□□ -0.33
NPM2-211ENST00000522953 TOM1O60784 492 aa12.97□□□□□ -0.33
NPM2-211ENST00000522953 PPP6R1Q9UPN7 881 aa12.97□□□□□ -0.33
NPM2-211ENST00000522953 CEP170BQ9Y4F5 1589 aaPredicted RBP12.96□□□□□ -0.33
NPM2-211ENST00000522953 EFCAB2Q5VUJ9 269 aa12.96□□□□□ -0.33
NPM2-211ENST00000522953 PLA2R1Q13018 1463 aa12.96□□□□□ -0.34
NPM2-211ENST00000522953 MROH2AA6NES4 1674 aa12.96□□□□□ -0.34
NPM2-211ENST00000522953 CLTCQ00610 1675 aaKnown RBP12.95□□□□□ -0.34
NPM2-211ENST00000522953 NPATQ14207 1427 aa12.95□□□□□ -0.34
NPM2-211ENST00000522953 PKD2Q13563 968 aa12.94□□□□□ -0.34
NPM2-211ENST00000522953 ARHGAP5Q13017 1502 aa12.93□□□□□ -0.34
NPM2-211ENST00000522953 POTEAQ6S8J7 498 aa12.93□□□□□ -0.34
NPM2-211ENST00000522953 ZMYM3Q14202 1370 aa12.93□□□□□ -0.34
NPM2-211ENST00000522953 KIDINS220Q9ULH0 1771 aa12.92□□□□□ -0.34
NPM2-211ENST00000522953 NEURL4Q96JN8 1562 aa12.92□□□□□ -0.34
NPM2-211ENST00000522953 CNTLNQ9NXG0 1405 aa12.92□□□□□ -0.34
NPM2-211ENST00000522953 CPS1P31327 1500 aa12.92□□□□□ -0.34
NPM2-211ENST00000522953 MLH3Q9UHC1 1453 aa12.91□□□□□ -0.34
NPM2-211ENST00000522953 SHANK2Q9UPX8 1470 aa12.91□□□□□ -0.34
NPM2-211ENST00000522953 POLR1AO95602 1720 aaPredicted RBP12.91□□□□□ -0.34
NPM2-211ENST00000522953 CDC42BPBQ9Y5S2 1711 aa12.9□□□□□ -0.34
NPM2-211ENST00000522953 VWDEQ8N2E2 1590 aa12.89□□□□□ -0.35
NPM2-211ENST00000522953 ITSN2Q9NZM3 1697 aa12.89□□□□□ -0.35
NPM2-211ENST00000522953 PTPRKQ15262 1439 aa12.88□□□□□ -0.35
NPM2-211ENST00000522953 DNMT1P26358 1616 aaKnown RBP12.88□□□□□ -0.35
NPM2-211ENST00000522953 STRCP1A6NGW2 1772 aa12.87□□□□□ -0.35
NPM2-211ENST00000522953 ABCC1P33527 1531 aa12.86□□□□□ -0.35
NPM2-211ENST00000522953 ATP1B4Q9UN42 357 aaPredicted RBP12.85□□□□□ -0.35
NPM2-211ENST00000522953 A2ML1A8K2U0 1454 aa12.84□□□□□ -0.35
NPM2-211ENST00000522953 LRRIQ1Q96JM4 1722 aa12.82□□□□□ -0.36
NPM2-211ENST00000522953 LRRC7Q96NW7 1537 aa12.81□□□□□ -0.36
NPM2-211ENST00000522953 PREX2Q70Z35 1606 aa12.8□□□□□ -0.36
NPM2-211ENST00000522953 RNF17Q9BXT8 1623 aaKnown RBP12.8□□□□□ -0.36
NPM2-211ENST00000522953 SAMD9LQ8IVG5 1584 aa12.8□□□□□ -0.36
NPM2-211ENST00000522953 TROQ12816 1431 aaPredicted RBP12.79□□□□□ -0.36
NPM2-211ENST00000522953 GGT6Q6P531 493 aa12.78□□□□□ -0.36
NPM2-211ENST00000522953 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.78□□□□□ -0.36
NPM2-211ENST00000522953 PLXNC1O60486 1568 aa12.77□□□□□ -0.37
NPM2-211ENST00000522953 FBXO31Q5XUX0 539 aaPredicted RBP12.76□□□□□ -0.37
NPM2-211ENST00000522953 CSRNP3Q8WYN3 585 aa12.76□□□□□ -0.37
NPM2-211ENST00000522953 NPHP4O75161 1426 aaPredicted RBP12.75□□□□□ -0.37
NPM2-211ENST00000522953 UPF1Q92900 1129 aaKnown RBP eCLIP12.75□□□□□ -0.37
NPM2-211ENST00000522953 XIRP1Q702N8 1843 aaKnown RBP12.74□□□□□ -0.37
NPM2-211ENST00000522953 CDC42BPAQ5VT25 1732 aa12.74□□□□□ -0.37
NPM2-211ENST00000522953 IQGAP1P46940 1657 aa12.74□□□□□ -0.37
NPM2-211ENST00000522953 SYCP2Q9BX26 1530 aa12.74□□□□□ -0.37
NPM2-211ENST00000522953 SYNMO15061 1565 aa12.73□□□□□ -0.37
NPM2-211ENST00000522953 ATP7AQ04656 1500 aa12.72□□□□□ -0.37
NPM2-211ENST00000522953 A2MP01023 1474 aa12.72□□□□□ -0.37
NPM2-211ENST00000522953 ZNF777Q9ULD5 760 aaPredicted RBP12.72□□□□□ -0.37
NPM2-211ENST00000522953 CLIP1P30622 1438 aa12.71□□□□□ -0.37
NPM2-211ENST00000522953 TNRQ92752 1358 aa12.71□□□□□ -0.37
NPM2-211ENST00000522953 ANKLE2Q86XL3 938 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms