RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 CDC42BPAQ5VT25 1732 aa32.34■■■□□ 2.77
R3HCC1-208ENST00000522012 ABCA9Q8IUA7 1624 aa32.31■■■□□ 2.76
R3HCC1-208ENST00000522012 ARHGAP5Q13017 1502 aa32.31■■■□□ 2.76
R3HCC1-208ENST00000522012 PREX2Q70Z35 1606 aa32.3■■■□□ 2.76
R3HCC1-208ENST00000522012 EFCAB2Q5VUJ9 269 aa32.28■■■□□ 2.76
R3HCC1-208ENST00000522012 CAMSAP2Q08AD1 1489 aa32.28■■■□□ 2.76
R3HCC1-208ENST00000522012 MYO5CQ9NQX4 1742 aa32.27■■■□□ 2.76
R3HCC1-208ENST00000522012 FAM69CQ0P6D2 419 aa32.26■■■□□ 2.76
R3HCC1-208ENST00000522012 CD109Q6YHK3 1445 aa32.26■■■□□ 2.75
R3HCC1-208ENST00000522012 CDC42BPBQ9Y5S2 1711 aa32.23■■■□□ 2.75
R3HCC1-208ENST00000522012 ARAP3Q8WWN8 1544 aa32.2■■■□□ 2.74
R3HCC1-208ENST00000522012 GLI2P10070 1586 aa32.19■■■□□ 2.74
R3HCC1-208ENST00000522012 AEBP2Q6ZN18 517 aaPredicted RBP32.18■■■□□ 2.74
R3HCC1-208ENST00000522012 HNRNPMP52272 730 aaKnown RBP eCLIP32.17■■■□□ 2.74
R3HCC1-208ENST00000522012 DIP2BQ9P265 1576 aa32.17■■■□□ 2.74
R3HCC1-208ENST00000522012 SAMD9LQ8IVG5 1584 aa32.16■■■□□ 2.74
R3HCC1-208ENST00000522012 FANCAO15360 1455 aa32.15■■■□□ 2.74
R3HCC1-208ENST00000522012 PTPRKQ15262 1439 aa32.14■■■□□ 2.74
R3HCC1-208ENST00000522012 ABCC5O15440 1437 aa32.13■■■□□ 2.73
R3HCC1-208ENST00000522012 DAPK1P53355 1430 aa32.13■■■□□ 2.73
R3HCC1-208ENST00000522012 PLEKHH2Q8IVE3 1493 aa32.12■■■□□ 2.73
R3HCC1-208ENST00000522012 CHIC2Q9UKJ5 165 aa32.1■■■□□ 2.73
R3HCC1-208ENST00000522012 KIAA1107Q9UPP5 1409 aa32.09■■■□□ 2.73
R3HCC1-208ENST00000522012 DNMT1P26358 1616 aaKnown RBP32.08■■■□□ 2.73
R3HCC1-208ENST00000522012 MAP3K4Q9Y6R4 1608 aa32.08■■■□□ 2.73
R3HCC1-208ENST00000522012 MBD5Q9P267 1494 aa32.07■■■□□ 2.72
R3HCC1-208ENST00000522012 RSPH4AQ5TD94 716 aa32.07■■■□□ 2.72
R3HCC1-208ENST00000522012 SYCP2Q9BX26 1530 aa32.06■■■□□ 2.72
R3HCC1-208ENST00000522012 KIF13AQ9H1H9 1805 aa32.06■■■□□ 2.72
R3HCC1-208ENST00000522012 AKNAQ7Z591 1439 aa32.05■■■□□ 2.72
R3HCC1-208ENST00000522012 TSPY4P0CV99 314 aa32.03■■■□□ 2.72
R3HCC1-208ENST00000522012 TSPY10P0CW01 314 aa32.03■■■□□ 2.72
R3HCC1-208ENST00000522012 ARHGEF12Q9NZN5 1544 aa32.03■■■□□ 2.72
R3HCC1-208ENST00000522012 ABCC1P33527 1531 aa32.02■■■□□ 2.72
R3HCC1-208ENST00000522012 ARHGEF5Q12774 1597 aa32.01■■■□□ 2.72
R3HCC1-208ENST00000522012 ADGRL1O94910 1474 aa32.01■■■□□ 2.71
R3HCC1-208ENST00000522012 CCDC141Q6ZP82 1450 aa32.01■■■□□ 2.71
R3HCC1-208ENST00000522012 SCAPERQ9BY12 1400 aa31.99■■■□□ 2.71
R3HCC1-208ENST00000522012 RRP7BPQ9NSQ0 103 aa31.99■■■□□ 2.71
R3HCC1-208ENST00000522012 CFAP74Q9C0B2 1584 aa31.97■■■□□ 2.71
R3HCC1-208ENST00000522012 NEO1Q92859 1461 aa31.97■■■□□ 2.71
R3HCC1-208ENST00000522012 TRAPPC8Q9Y2L5 1435 aa31.96■■■□□ 2.71
R3HCC1-208ENST00000522012 C9orf84Q5VXU9 1444 aa31.94■■■□□ 2.7
R3HCC1-208ENST00000522012 AFAP1Q8N556 730 aa31.94■■■□□ 2.7
R3HCC1-208ENST00000522012 SETD5Q9C0A6 1442 aa31.93■■■□□ 2.7
R3HCC1-208ENST00000522012 ROCK1Q13464 1354 aa31.93■■■□□ 2.7
R3HCC1-208ENST00000522012 SHANK2Q9UPX8 1470 aa31.93■■■□□ 2.7
R3HCC1-208ENST00000522012 TEX14Q8IWB6 1497 aa31.91■■■□□ 2.7
R3HCC1-208ENST00000522012 HFM1A2PYH4 1435 aa31.9■■■□□ 2.7
R3HCC1-208ENST00000522012 CROCC2H7BZ55 1655 aa31.9■■■□□ 2.7
R3HCC1-208ENST00000522012 ANKRD30AQ9BXX3 1397 aa31.89■■■□□ 2.7
R3HCC1-208ENST00000522012 NAIPQ13075 1403 aa31.87■■■□□ 2.69
R3HCC1-208ENST00000522012 NCOA1Q15788 1441 aa31.87■■■□□ 2.69
R3HCC1-208ENST00000522012 RAB3GAP2Q9H2M9 1393 aa31.86■■■□□ 2.69
R3HCC1-208ENST00000522012 TSPOAP1O95153 1857 aa31.86■■■□□ 2.69
R3HCC1-208ENST00000522012 SPAG9O60271 1321 aaKnown RBP31.86■■■□□ 2.69
R3HCC1-208ENST00000522012 ADGRL2O95490 1459 aa31.86■■■□□ 2.69
R3HCC1-208ENST00000522012 PPRC1Q5VV67 1664 aaKnown RBP31.84■■■□□ 2.69
R3HCC1-208ENST00000522012 DENND4BO75064 1496 aaPredicted RBP31.82■■■□□ 2.68
R3HCC1-208ENST00000522012 MYT1LQ9UL68 1186 aa31.81■■■□□ 2.68
R3HCC1-208ENST00000522012 POGZQ7Z3K3 1410 aa31.81■■■□□ 2.68
R3HCC1-208ENST00000522012 ZNF518AQ6AHZ1 1483 aa31.81■■■□□ 2.68
R3HCC1-208ENST00000522012 RAPGEF3O95398 923 aa31.8■■■□□ 2.68
R3HCC1-208ENST00000522012 MAST1Q9Y2H9 1570 aa31.8■■■□□ 2.68
R3HCC1-208ENST00000522012 ADGBQ8N7X0 1667 aa31.79■■■□□ 2.68
R3HCC1-208ENST00000522012 KIF15Q9NS87 1388 aa31.77■■■□□ 2.68
R3HCC1-208ENST00000522012 RTEL1-TNFRSF6BF6WH68 1400 aa31.76■■■□□ 2.68
R3HCC1-208ENST00000522012 HRCP23327 699 aa31.76■■■□□ 2.68
R3HCC1-208ENST00000522012 GCC2Q8IWJ2 1684 aa31.72■■■□□ 2.67
R3HCC1-208ENST00000522012 ZFYVE16Q7Z3T8 1539 aa31.7■■■□□ 2.67
R3HCC1-208ENST00000522012 ANKRD50Q9ULJ7 1429 aa31.69■■■□□ 2.66
R3HCC1-208ENST00000522012 CCER1Q8TC90 406 aaPredicted RBP31.69■■■□□ 2.66
R3HCC1-208ENST00000522012 ATP7AQ04656 1500 aa31.68■■■□□ 2.66
R3HCC1-208ENST00000522012 KDM5CP41229 1560 aa31.67■■■□□ 2.66
R3HCC1-208ENST00000522012 PLXNC1O60486 1568 aa31.66■■■□□ 2.66
R3HCC1-208ENST00000522012 INO80Q9ULG1 1556 aaPredicted RBP31.65■■■□□ 2.66
R3HCC1-208ENST00000522012 KDM6BO15054 1643 aa31.65■■■□□ 2.66
R3HCC1-208ENST00000522012 MLH3Q9UHC1 1453 aa31.65■■■□□ 2.66
R3HCC1-208ENST00000522012 TRIM52Q96A61 297 aa31.63■■■□□ 2.65
R3HCC1-208ENST00000522012 COL17A1Q9UMD9 1497 aaPredicted RBP31.61■■■□□ 2.65
R3HCC1-208ENST00000522012 DUOX2Q9NRD8 1548 aa31.61■■■□□ 2.65
R3HCC1-208ENST00000522012 RICTORQ6R327 1708 aa31.61■■■□□ 2.65
R3HCC1-208ENST00000522012 FRMPD1Q5SYB0 1578 aa31.59■■■□□ 2.65
R3HCC1-208ENST00000522012 HECW2Q9P2P5 1572 aa31.59■■■□□ 2.65
R3HCC1-208ENST00000522012 ACIN1Q9UKV3 1341 aaKnown RBP31.58■■■□□ 2.65
R3HCC1-208ENST00000522012 KIDINS220Q9ULH0 1771 aa31.57■■■□□ 2.64
R3HCC1-208ENST00000522012 DHX57Q6P158 1386 aaKnown RBP31.57■■■□□ 2.64
R3HCC1-208ENST00000522012 ERBINQ96RT1 1412 aa31.54■■■□□ 2.64
R3HCC1-208ENST00000522012 DHX29Q7Z478 1369 aaKnown RBP31.53■■■□□ 2.64
R3HCC1-208ENST00000522012 ZMYM4Q5VZL5 1548 aa31.53■■■□□ 2.64
R3HCC1-208ENST00000522012 YEATS2Q9ULM3 1422 aa31.5■■■□□ 2.63
R3HCC1-208ENST00000522012 MAGI2Q86UL8 1455 aa31.5■■■□□ 2.63
R3HCC1-208ENST00000522012 A2MP01023 1474 aa31.49■■■□□ 2.63
R3HCC1-208ENST00000522012 ABCA6Q8N139 1617 aa31.45■■■□□ 2.63
R3HCC1-208ENST00000522012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.44■■■□□ 2.62
R3HCC1-208ENST00000522012 NUP155O75694 1391 aa31.44■■■□□ 2.62
R3HCC1-208ENST00000522012 KIF3BO15066 747 aa31.44■■■□□ 2.62
R3HCC1-208ENST00000522012 DIP2CQ9Y2E4 1556 aa31.43■■■□□ 2.62
R3HCC1-208ENST00000522012 MPHOSPH9Q99550 1183 aa31.43■■■□□ 2.62
R3HCC1-208ENST00000522012 SLC4A1APQ9BWU0 796 aaKnown RBP31.4■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms