RNA–Protein interactions for RNA: ENST00000521368.5

CTNNA1-226, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-226ENST00000521368 COL17A1Q9UMD9 1497 aaPredicted RBP21.64■■□□□ 1.06
CTNNA1-226ENST00000521368 AKNAQ7Z591 1439 aa21.63■■□□□ 1.05
CTNNA1-226ENST00000521368 EFCAB2Q5VUJ9 269 aa21.63■■□□□ 1.05
CTNNA1-226ENST00000521368 GPATCH8Q9UKJ3 1502 aaKnown RBP21.63■■□□□ 1.05
CTNNA1-226ENST00000521368 NCOA2Q15596 1464 aa21.63■■□□□ 1.05
CTNNA1-226ENST00000521368 ITSN2Q9NZM3 1697 aa21.62■■□□□ 1.05
CTNNA1-226ENST00000521368 CCNB3Q8WWL7 1395 aa21.61■■□□□ 1.05
CTNNA1-226ENST00000521368 KANK4Q5T7N3 995 aaPredicted RBP21.61■■□□□ 1.05
CTNNA1-226ENST00000521368 ADGRL1O94910 1474 aa21.58■■□□□ 1.04
CTNNA1-226ENST00000521368 DENND4BO75064 1496 aaPredicted RBP21.56■■□□□ 1.04
CTNNA1-226ENST00000521368 RICTORQ6R327 1708 aa21.55■■□□□ 1.04
CTNNA1-226ENST00000521368 FRMPD1Q5SYB0 1578 aa21.55■■□□□ 1.04
CTNNA1-226ENST00000521368 ABCC1P33527 1531 aa21.55■■□□□ 1.04
CTNNA1-226ENST00000521368 SCAPERQ9BY12 1400 aa21.53■■□□□ 1.04
CTNNA1-226ENST00000521368 SAMD9LQ8IVG5 1584 aa21.53■■□□□ 1.04
CTNNA1-226ENST00000521368 CFDP1Q9UEE9 299 aaPredicted RBP21.52■■□□□ 1.04
CTNNA1-226ENST00000521368 POGZQ7Z3K3 1410 aa21.51■■□□□ 1.03
CTNNA1-226ENST00000521368 PLEKHH2Q8IVE3 1493 aa21.51■■□□□ 1.03
CTNNA1-226ENST00000521368 ZMYM4Q5VZL5 1548 aa21.5■■□□□ 1.03
CTNNA1-226ENST00000521368 RAPGEF3O95398 923 aa21.49■■□□□ 1.03
CTNNA1-226ENST00000521368 KIAA1107Q9UPP5 1409 aa21.48■■□□□ 1.03
CTNNA1-226ENST00000521368 ZNF518AQ6AHZ1 1483 aa21.48■■□□□ 1.03
CTNNA1-226ENST00000521368 MYOM3Q5VTT5 1437 aa21.47■■□□□ 1.03
CTNNA1-226ENST00000521368 MIA2Q96PC5 1412 aa21.46■■□□□ 1.03
CTNNA1-226ENST00000521368 ARHGEF12Q9NZN5 1544 aa21.46■■□□□ 1.03
CTNNA1-226ENST00000521368 KDM5CP41229 1560 aa21.46■■□□□ 1.03
CTNNA1-226ENST00000521368 ZNF777Q9ULD5 760 aaPredicted RBP21.45■■□□□ 1.02
CTNNA1-226ENST00000521368 MAGI2Q86UL8 1455 aa21.45■■□□□ 1.02
CTNNA1-226ENST00000521368 SYCP2Q9BX26 1530 aa21.45■■□□□ 1.02
CTNNA1-226ENST00000521368 CAMSAP2Q08AD1 1489 aa21.42■■□□□ 1.02
CTNNA1-226ENST00000521368 TRAPPC8Q9Y2L5 1435 aa21.41■■□□□ 1.02
CTNNA1-226ENST00000521368 ARHGEF40Q8TER5 1519 aa21.4■■□□□ 1.02
CTNNA1-226ENST00000521368 HECW2Q9P2P5 1572 aa21.39■■□□□ 1.01
CTNNA1-226ENST00000521368 MBD5Q9P267 1494 aa21.39■■□□□ 1.01
CTNNA1-226ENST00000521368 ZNF644Q9H582 1327 aaPredicted RBP21.38■■□□□ 1.01
CTNNA1-226ENST00000521368 ZFYVE16Q7Z3T8 1539 aa21.38■■□□□ 1.01
CTNNA1-226ENST00000521368 MLH3Q9UHC1 1453 aa21.38■■□□□ 1.01
CTNNA1-226ENST00000521368 AFAP1Q8N556 730 aa21.37■■□□□ 1.01
CTNNA1-226ENST00000521368 FGD6Q6ZV73 1430 aa21.37■■□□□ 1.01
CTNNA1-226ENST00000521368 ARHGEF5Q12774 1597 aa21.36■■□□□ 1.01
CTNNA1-226ENST00000521368 HNRNPMP52272 730 aaKnown RBP eCLIP21.36■■□□□ 1.01
CTNNA1-226ENST00000521368 PTPN23Q9H3S7 1636 aa21.36■■□□□ 1.01
CTNNA1-226ENST00000521368 RSPH4AQ5TD94 716 aa21.34■■□□□ 1.01
CTNNA1-226ENST00000521368 TCOF1Q13428 1488 aaKnown RBP21.33■■□□□ 1.01
CTNNA1-226ENST00000521368 CCDC141Q6ZP82 1450 aa21.33■■□□□ 1.01
CTNNA1-226ENST00000521368 YEATS2Q9ULM3 1422 aa21.32■■□□□ 1
CTNNA1-226ENST00000521368 KIDINS220Q9ULH0 1771 aa21.32■■□□□ 1
CTNNA1-226ENST00000521368 INO80Q9ULG1 1556 aaPredicted RBP21.31■■□□□ 1
CTNNA1-226ENST00000521368 ATP7AQ04656 1500 aa21.29■■□□□ 1
CTNNA1-226ENST00000521368 DIP2CQ9Y2E4 1556 aa21.29■■□□□ 1
CTNNA1-226ENST00000521368 ABCA6Q8N139 1617 aa21.29■■□□□ 1
CTNNA1-226ENST00000521368 SPAG9O60271 1321 aaKnown RBP21.29■■□□□ 1
CTNNA1-226ENST00000521368 REREQ9P2R6 1566 aa21.28■■□□□ 1
CTNNA1-226ENST00000521368 ATP10AO60312 1499 aa21.28■■□□□ 1
CTNNA1-226ENST00000521368 RTEL1-TNFRSF6BF6WH68 1400 aa21.28■■□□□ 1
CTNNA1-226ENST00000521368 PPARGC1BQ86YN6 1023 aaKnown RBP21.26■□□□□ 0.99
CTNNA1-226ENST00000521368 C9orf84Q5VXU9 1444 aa21.26■□□□□ 0.99
CTNNA1-226ENST00000521368 MAST1Q9Y2H9 1570 aa21.25■□□□□ 0.99
CTNNA1-226ENST00000521368 DNMT1P26358 1616 aaKnown RBP21.25■□□□□ 0.99
CTNNA1-226ENST00000521368 MYT1LQ9UL68 1186 aa21.24■□□□□ 0.99
CTNNA1-226ENST00000521368 CROCC2H7BZ55 1655 aa21.24■□□□□ 0.99
CTNNA1-226ENST00000521368 SHANK2Q9UPX8 1470 aa21.22■□□□□ 0.99
CTNNA1-226ENST00000521368 ADGBQ8N7X0 1667 aa21.21■□□□□ 0.99
CTNNA1-226ENST00000521368 TSPY4P0CV99 314 aa21.21■□□□□ 0.99
CTNNA1-226ENST00000521368 TSPY10P0CW01 314 aa21.21■□□□□ 0.99
CTNNA1-226ENST00000521368 SIGLEC1Q9BZZ2 1709 aa21.21■□□□□ 0.99
CTNNA1-226ENST00000521368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.2■□□□□ 0.98
CTNNA1-226ENST00000521368 ABCC5O15440 1437 aa21.2■□□□□ 0.98
CTNNA1-226ENST00000521368 DAPK1P53355 1430 aa21.2■□□□□ 0.98
CTNNA1-226ENST00000521368 AGLP35573 1532 aa21.19■□□□□ 0.98
CTNNA1-226ENST00000521368 RRBP1Q9P2E9 1410 aaKnown RBP21.18■□□□□ 0.98
CTNNA1-226ENST00000521368 PLXNC1O60486 1568 aa21.18■□□□□ 0.98
CTNNA1-226ENST00000521368 BCORL1Q5H9F3 1711 aa21.18■□□□□ 0.98
CTNNA1-226ENST00000521368 A2MP01023 1474 aa21.15■□□□□ 0.98
CTNNA1-226ENST00000521368 FAM50AQ14320 339 aaKnown RBP21.15■□□□□ 0.98
CTNNA1-226ENST00000521368 ARID4BQ4LE39 1312 aaPredicted RBP21.14■□□□□ 0.97
CTNNA1-226ENST00000521368 ADAMTSL3P82987 1691 aa21.13■□□□□ 0.97
CTNNA1-226ENST00000521368 KDM4FA0A1W2PPD8 638 aa21.11■□□□□ 0.97
CTNNA1-226ENST00000521368 DHX29Q7Z478 1369 aaKnown RBP21.1■□□□□ 0.97
CTNNA1-226ENST00000521368 ADGRL2O95490 1459 aa21.1■□□□□ 0.97
CTNNA1-226ENST00000521368 DUOX2Q9NRD8 1548 aa21.07■□□□□ 0.96
CTNNA1-226ENST00000521368 ANKRD30AQ9BXX3 1397 aa21.07■□□□□ 0.96
CTNNA1-226ENST00000521368 MADDQ8WXG6 1647 aa21.05■□□□□ 0.96
CTNNA1-226ENST00000521368 EIF2AK4Q9P2K8 1649 aaKnown RBP21.05■□□□□ 0.96
CTNNA1-226ENST00000521368 NCOA1Q15788 1441 aa21.04■□□□□ 0.96
CTNNA1-226ENST00000521368 KIF15Q9NS87 1388 aa21.04■□□□□ 0.96
CTNNA1-226ENST00000521368 PTPRKQ15262 1439 aa21.04■□□□□ 0.96
CTNNA1-226ENST00000521368 FER1L4A9Z1Z3 1794 aa21.03■□□□□ 0.96
CTNNA1-226ENST00000521368 ROCK1Q13464 1354 aa21.02■□□□□ 0.96
CTNNA1-226ENST00000521368 ERBINQ96RT1 1412 aa21.02■□□□□ 0.96
CTNNA1-226ENST00000521368 CHIC2Q9UKJ5 165 aa21.01■□□□□ 0.95
CTNNA1-226ENST00000521368 MLECQ14165 292 aa21■□□□□ 0.95
CTNNA1-226ENST00000521368 RRP7BPQ9NSQ0 103 aa20.99■□□□□ 0.95
CTNNA1-226ENST00000521368 RNF17Q9BXT8 1623 aaKnown RBP20.99■□□□□ 0.95
CTNNA1-226ENST00000521368 RIMS1Q86UR5 1692 aaKnown RBP20.99■□□□□ 0.95
CTNNA1-226ENST00000521368 FAM135AQ9P2D6 1515 aa20.99■□□□□ 0.95
CTNNA1-226ENST00000521368 PPP6R1Q9UPN7 881 aa20.97■□□□□ 0.95
CTNNA1-226ENST00000521368 PTPRMP28827 1452 aa20.96■□□□□ 0.95
CTNNA1-226ENST00000521368 KIF3BO15066 747 aa20.96■□□□□ 0.95
CTNNA1-226ENST00000521368 CNTLNQ9NXG0 1405 aa20.95■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms