RNA–Protein interactions for RNA: ENST00000521242.1

LINC00599-204, long intergenic non-protein coding RNA 599, humanhuman

TSL 3 BASIC

Gene LINC00599, Length 716 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00599-204ENST00000521242 CCNB3Q8WWL7 1395 aa29.18■■■□□ 2.26
LINC00599-204ENST00000521242 CDC42BPAQ5VT25 1732 aa29.18■■■□□ 2.26
LINC00599-204ENST00000521242 KANK4Q5T7N3 995 aaPredicted RBP29.18■■■□□ 2.26
LINC00599-204ENST00000521242 GPATCH8Q9UKJ3 1502 aaKnown RBP29.17■■■□□ 2.26
LINC00599-204ENST00000521242 APLP2Q06481 763 aa29.17■■■□□ 2.26
LINC00599-204ENST00000521242 ZNF777Q9ULD5 760 aaPredicted RBP29.17■■■□□ 2.26
LINC00599-204ENST00000521242 EHBP1L1Q8N3D4 1523 aa29.16■■■□□ 2.26
LINC00599-204ENST00000521242 PREX2Q70Z35 1606 aa29.16■■■□□ 2.26
LINC00599-204ENST00000521242 CFDP1Q9UEE9 299 aaPredicted RBP29.14■■■□□ 2.26
LINC00599-204ENST00000521242 FRMPD1Q5SYB0 1578 aa29.13■■■□□ 2.25
LINC00599-204ENST00000521242 RICTORQ6R327 1708 aa29.13■■■□□ 2.25
LINC00599-204ENST00000521242 MAP3K1Q13233 1512 aa29.13■■■□□ 2.25
LINC00599-204ENST00000521242 LRRC9Q6ZRR7 1453 aa29.11■■■□□ 2.25
LINC00599-204ENST00000521242 AFAP1Q8N556 730 aa29.11■■■□□ 2.25
LINC00599-204ENST00000521242 KDM4FA0A1W2PPD8 638 aa29.07■■■□□ 2.24
LINC00599-204ENST00000521242 NCOA2Q15596 1464 aa29.06■■■□□ 2.24
LINC00599-204ENST00000521242 POGZQ7Z3K3 1410 aa29.06■■■□□ 2.24
LINC00599-204ENST00000521242 SUPT6HQ7KZ85 1726 aaKnown RBP29.06■■■□□ 2.24
LINC00599-204ENST00000521242 HNRNPMP52272 730 aaKnown RBP eCLIP29.04■■■□□ 2.24
LINC00599-204ENST00000521242 AEBP2Q6ZN18 517 aaPredicted RBP29.04■■■□□ 2.24
LINC00599-204ENST00000521242 ZNF644Q9H582 1327 aaPredicted RBP29.03■■■□□ 2.24
LINC00599-204ENST00000521242 ARHGEF12Q9NZN5 1544 aa29.03■■■□□ 2.24
LINC00599-204ENST00000521242 MYT1LQ9UL68 1186 aa29■■■□□ 2.23
LINC00599-204ENST00000521242 TRAPPC8Q9Y2L5 1435 aa29■■■□□ 2.23
LINC00599-204ENST00000521242 ZNF518AQ6AHZ1 1483 aa28.99■■■□□ 2.23
LINC00599-204ENST00000521242 SAMD9LQ8IVG5 1584 aa28.99■■■□□ 2.23
LINC00599-204ENST00000521242 ABCC1P33527 1531 aa28.99■■■□□ 2.23
LINC00599-204ENST00000521242 ZMYM4Q5VZL5 1548 aa28.99■■■□□ 2.23
LINC00599-204ENST00000521242 YEATS2Q9ULM3 1422 aa28.97■■■□□ 2.23
LINC00599-204ENST00000521242 MAGI2Q86UL8 1455 aa28.97■■■□□ 2.23
LINC00599-204ENST00000521242 ARID4BQ4LE39 1312 aaPredicted RBP28.95■■■□□ 2.23
LINC00599-204ENST00000521242 ITSN2Q9NZM3 1697 aa28.95■■■□□ 2.22
LINC00599-204ENST00000521242 ZFYVE16Q7Z3T8 1539 aa28.94■■■□□ 2.22
LINC00599-204ENST00000521242 KIAA1107Q9UPP5 1409 aa28.94■■■□□ 2.22
LINC00599-204ENST00000521242 PLEKHH2Q8IVE3 1493 aa28.92■■■□□ 2.22
LINC00599-204ENST00000521242 SYCP2Q9BX26 1530 aa28.91■■■□□ 2.22
LINC00599-204ENST00000521242 KDM5CP41229 1560 aa28.9■■■□□ 2.22
LINC00599-204ENST00000521242 ARHGEF40Q8TER5 1519 aa28.89■■■□□ 2.22
LINC00599-204ENST00000521242 ATP10AO60312 1499 aa28.87■■■□□ 2.21
LINC00599-204ENST00000521242 SPAG9O60271 1321 aaKnown RBP28.87■■■□□ 2.21
LINC00599-204ENST00000521242 MLH3Q9UHC1 1453 aa28.86■■■□□ 2.21
LINC00599-204ENST00000521242 HECW2Q9P2P5 1572 aa28.84■■■□□ 2.21
LINC00599-204ENST00000521242 MYOM3Q5VTT5 1437 aa28.83■■■□□ 2.21
LINC00599-204ENST00000521242 MBD5Q9P267 1494 aa28.83■■■□□ 2.21
LINC00599-204ENST00000521242 CAMSAP2Q08AD1 1489 aa28.81■■■□□ 2.2
LINC00599-204ENST00000521242 RSPH4AQ5TD94 716 aa28.79■■■□□ 2.2
LINC00599-204ENST00000521242 KIDINS220Q9ULH0 1771 aa28.79■■■□□ 2.2
LINC00599-204ENST00000521242 PPARGC1BQ86YN6 1023 aaKnown RBP28.78■■■□□ 2.2
LINC00599-204ENST00000521242 C9orf84Q5VXU9 1444 aa28.77■■■□□ 2.2
LINC00599-204ENST00000521242 MIA2Q96PC5 1412 aa28.77■■■□□ 2.2
LINC00599-204ENST00000521242 SIGLEC1Q9BZZ2 1709 aa28.77■■■□□ 2.2
LINC00599-204ENST00000521242 MLECQ14165 292 aa28.77■■■□□ 2.2
LINC00599-204ENST00000521242 DIP2CQ9Y2E4 1556 aa28.75■■■□□ 2.19
LINC00599-204ENST00000521242 ABCA6Q8N139 1617 aa28.74■■■□□ 2.19
LINC00599-204ENST00000521242 BCORL1Q5H9F3 1711 aa28.73■■■□□ 2.19
LINC00599-204ENST00000521242 TSPY4P0CV99 314 aa28.71■■■□□ 2.19
LINC00599-204ENST00000521242 TSPY10P0CW01 314 aa28.71■■■□□ 2.19
LINC00599-204ENST00000521242 ADAMTSL3P82987 1691 aa28.7■■■□□ 2.19
LINC00599-204ENST00000521242 ATP7AQ04656 1500 aa28.7■■■□□ 2.19
LINC00599-204ENST00000521242 CCDC141Q6ZP82 1450 aa28.68■■■□□ 2.18
LINC00599-204ENST00000521242 FGD6Q6ZV73 1430 aa28.67■■■□□ 2.18
LINC00599-204ENST00000521242 RTEL1-TNFRSF6BF6WH68 1400 aa28.66■■■□□ 2.18
LINC00599-204ENST00000521242 ARHGEF5Q12774 1597 aa28.66■■■□□ 2.18
LINC00599-204ENST00000521242 INO80Q9ULG1 1556 aaPredicted RBP28.66■■■□□ 2.18
LINC00599-204ENST00000521242 PTPN23Q9H3S7 1636 aa28.64■■■□□ 2.18
LINC00599-204ENST00000521242 REREQ9P2R6 1566 aa28.63■■■□□ 2.17
LINC00599-204ENST00000521242 MADDQ8WXG6 1647 aa28.61■■■□□ 2.17
LINC00599-204ENST00000521242 A2MP01023 1474 aa28.59■■■□□ 2.17
LINC00599-204ENST00000521242 FAM50AQ14320 339 aaKnown RBP28.59■■■□□ 2.17
LINC00599-204ENST00000521242 AGLP35573 1532 aa28.59■■■□□ 2.17
LINC00599-204ENST00000521242 PTPRMP28827 1452 aa28.58■■■□□ 2.17
LINC00599-204ENST00000521242 TCOF1Q13428 1488 aaKnown RBP28.57■■■□□ 2.16
LINC00599-204ENST00000521242 PLPPR3Q6T4P5 718 aa28.56■■■□□ 2.16
LINC00599-204ENST00000521242 DHX29Q7Z478 1369 aaKnown RBP28.55■■■□□ 2.16
LINC00599-204ENST00000521242 RIMS1Q86UR5 1692 aaKnown RBP28.54■■■□□ 2.16
LINC00599-204ENST00000521242 ADGBQ8N7X0 1667 aa28.54■■■□□ 2.16
LINC00599-204ENST00000521242 ABCC5O15440 1437 aa28.54■■■□□ 2.16
LINC00599-204ENST00000521242 GGT6Q6P531 493 aa28.51■■■□□ 2.15
LINC00599-204ENST00000521242 ESF1Q9H501 851 aaKnown RBP28.51■■■□□ 2.15
LINC00599-204ENST00000521242 FER1L4A9Z1Z3 1794 aa28.51■■■□□ 2.15
LINC00599-204ENST00000521242 CHIC2Q9UKJ5 165 aa28.5■■■□□ 2.15
LINC00599-204ENST00000521242 KIF3BO15066 747 aa28.49■■■□□ 2.15
LINC00599-204ENST00000521242 PLXNC1O60486 1568 aa28.49■■■□□ 2.15
LINC00599-204ENST00000521242 MAST1Q9Y2H9 1570 aa28.49■■■□□ 2.15
LINC00599-204ENST00000521242 DAPK1P53355 1430 aa28.48■■■□□ 2.15
LINC00599-204ENST00000521242 CEBPAP49715 358 aaPredicted RBP28.47■■■□□ 2.15
LINC00599-204ENST00000521242 RRP7BPQ9NSQ0 103 aa28.47■■■□□ 2.15
LINC00599-204ENST00000521242 DNMT1P26358 1616 aaKnown RBP28.46■■■□□ 2.15
LINC00599-204ENST00000521242 CROCC2H7BZ55 1655 aa28.41■■■□□ 2.14
LINC00599-204ENST00000521242 SHANK2Q9UPX8 1470 aa28.4■■■□□ 2.14
LINC00599-204ENST00000521242 PPP6R1Q9UPN7 881 aa28.39■■■□□ 2.14
LINC00599-204ENST00000521242 ANKRD30AQ9BXX3 1397 aa28.37■■■□□ 2.13
LINC00599-204ENST00000521242 KIF15Q9NS87 1388 aa28.37■■■□□ 2.13
LINC00599-204ENST00000521242 ITGAEP38570 1179 aa28.36■■■□□ 2.13
LINC00599-204ENST00000521242 CNTLNQ9NXG0 1405 aa28.35■■■□□ 2.13
LINC00599-204ENST00000521242 NCOA1Q15788 1441 aa28.34■■■□□ 2.13
LINC00599-204ENST00000521242 ZMYM3Q14202 1370 aa28.33■■■□□ 2.13
LINC00599-204ENST00000521242 DUOX2Q9NRD8 1548 aa28.33■■■□□ 2.13
LINC00599-204ENST00000521242 PTPRKQ15262 1439 aa28.31■■■□□ 2.12
LINC00599-204ENST00000521242 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms