RNA–Protein interactions for RNA: ENST00000520736.1

GINS4-207, Transcript of GINS complex subunit 4, humanhuman

TSL 5

Gene GINS4, Length 375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-207ENST00000520736 TEX14Q8IWB6 1497 aa20.58■□□□□ 0.89
GINS4-207ENST00000520736 PHLDB1Q86UU1 1377 aa20.58■□□□□ 0.88
GINS4-207ENST00000520736 NEO1Q92859 1461 aa20.57■□□□□ 0.88
GINS4-207ENST00000520736 CCNB3Q8WWL7 1395 aa20.56■□□□□ 0.88
GINS4-207ENST00000520736 SAMD9LQ8IVG5 1584 aa20.55■□□□□ 0.88
GINS4-207ENST00000520736 MIA2Q96PC5 1412 aa20.55■□□□□ 0.88
GINS4-207ENST00000520736 ARHGAP5Q13017 1502 aa20.55■□□□□ 0.88
GINS4-207ENST00000520736 FANCAO15360 1455 aa20.55■□□□□ 0.88
GINS4-207ENST00000520736 ABCC1P33527 1531 aa20.53■□□□□ 0.88
GINS4-207ENST00000520736 TCOF1Q13428 1488 aaKnown RBP20.51■□□□□ 0.87
GINS4-207ENST00000520736 FGD6Q6ZV73 1430 aa20.51■□□□□ 0.87
GINS4-207ENST00000520736 PTPN23Q9H3S7 1636 aa20.49■□□□□ 0.87
GINS4-207ENST00000520736 CAMSAP2Q08AD1 1489 aa20.48■□□□□ 0.87
GINS4-207ENST00000520736 AKNAQ7Z591 1439 aa20.46■□□□□ 0.87
GINS4-207ENST00000520736 RRBP1Q9P2E9 1410 aaKnown RBP20.46■□□□□ 0.87
GINS4-207ENST00000520736 PLEKHH2Q8IVE3 1493 aa20.46■□□□□ 0.87
GINS4-207ENST00000520736 RICTORQ6R327 1708 aa20.46■□□□□ 0.87
GINS4-207ENST00000520736 FRMPD1Q5SYB0 1578 aa20.46■□□□□ 0.87
GINS4-207ENST00000520736 KIAA1107Q9UPP5 1409 aa20.45■□□□□ 0.86
GINS4-207ENST00000520736 ARHGEF5Q12774 1597 aa20.45■□□□□ 0.86
GINS4-207ENST00000520736 SYCP2Q9BX26 1530 aa20.44■□□□□ 0.86
GINS4-207ENST00000520736 ADGRL1O94910 1474 aa20.43■□□□□ 0.86
GINS4-207ENST00000520736 ARHGEF12Q9NZN5 1544 aa20.43■□□□□ 0.86
GINS4-207ENST00000520736 EFCAB2Q5VUJ9 269 aa20.43■□□□□ 0.86
GINS4-207ENST00000520736 KDM5CP41229 1560 aa20.42■□□□□ 0.86
GINS4-207ENST00000520736 CROCC2H7BZ55 1655 aa20.42■□□□□ 0.86
GINS4-207ENST00000520736 CFDP1Q9UEE9 299 aaPredicted RBP20.42■□□□□ 0.86
GINS4-207ENST00000520736 MBD5Q9P267 1494 aa20.42■□□□□ 0.86
GINS4-207ENST00000520736 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.41■□□□□ 0.86
GINS4-207ENST00000520736 KDM6BO15054 1643 aa20.41■□□□□ 0.86
GINS4-207ENST00000520736 DNMT1P26358 1616 aaKnown RBP20.4■□□□□ 0.86
GINS4-207ENST00000520736 ZMYM4Q5VZL5 1548 aa20.4■□□□□ 0.86
GINS4-207ENST00000520736 POGZQ7Z3K3 1410 aa20.4■□□□□ 0.86
GINS4-207ENST00000520736 COL17A1Q9UMD9 1497 aaPredicted RBP20.39■□□□□ 0.85
GINS4-207ENST00000520736 PPARGC1BQ86YN6 1023 aaKnown RBP20.39■□□□□ 0.85
GINS4-207ENST00000520736 DENND4BO75064 1496 aaPredicted RBP20.37■□□□□ 0.85
GINS4-207ENST00000520736 ZNF518AQ6AHZ1 1483 aa20.37■□□□□ 0.85
GINS4-207ENST00000520736 SCAPERQ9BY12 1400 aa20.36■□□□□ 0.85
GINS4-207ENST00000520736 INO80Q9ULG1 1556 aaPredicted RBP20.36■□□□□ 0.85
GINS4-207ENST00000520736 MAST1Q9Y2H9 1570 aa20.36■□□□□ 0.85
GINS4-207ENST00000520736 CCDC141Q6ZP82 1450 aa20.35■□□□□ 0.85
GINS4-207ENST00000520736 ZNF644Q9H582 1327 aaPredicted RBP20.34■□□□□ 0.85
GINS4-207ENST00000520736 SHANK2Q9UPX8 1470 aa20.34■□□□□ 0.85
GINS4-207ENST00000520736 TRAPPC8Q9Y2L5 1435 aa20.34■□□□□ 0.85
GINS4-207ENST00000520736 HECW2Q9P2P5 1572 aa20.33■□□□□ 0.84
GINS4-207ENST00000520736 ZFYVE16Q7Z3T8 1539 aa20.32■□□□□ 0.84
GINS4-207ENST00000520736 DAPK1P53355 1430 aa20.29■□□□□ 0.84
GINS4-207ENST00000520736 KIDINS220Q9ULH0 1771 aa20.29■□□□□ 0.84
GINS4-207ENST00000520736 MLH3Q9UHC1 1453 aa20.29■□□□□ 0.84
GINS4-207ENST00000520736 ABCC5O15440 1437 aa20.28■□□□□ 0.84
GINS4-207ENST00000520736 ZNF777Q9ULD5 760 aaPredicted RBP20.28■□□□□ 0.84
GINS4-207ENST00000520736 MAGI2Q86UL8 1455 aa20.28■□□□□ 0.84
GINS4-207ENST00000520736 PLXNC1O60486 1568 aa20.28■□□□□ 0.84
GINS4-207ENST00000520736 ADGBQ8N7X0 1667 aa20.28■□□□□ 0.84
GINS4-207ENST00000520736 ARHGEF40Q8TER5 1519 aa20.27■□□□□ 0.84
GINS4-207ENST00000520736 ATP7AQ04656 1500 aa20.27■□□□□ 0.83
GINS4-207ENST00000520736 RSPH4AQ5TD94 716 aa20.26■□□□□ 0.83
GINS4-207ENST00000520736 RTEL1-TNFRSF6BF6WH68 1400 aa20.26■□□□□ 0.83
GINS4-207ENST00000520736 ADGRL2O95490 1459 aa20.24■□□□□ 0.83
GINS4-207ENST00000520736 ABCA6Q8N139 1617 aa20.24■□□□□ 0.83
GINS4-207ENST00000520736 HNRNPMP52272 730 aaKnown RBP eCLIP20.23■□□□□ 0.83
GINS4-207ENST00000520736 REREQ9P2R6 1566 aa20.23■□□□□ 0.83
GINS4-207ENST00000520736 DIP2CQ9Y2E4 1556 aa20.23■□□□□ 0.83
GINS4-207ENST00000520736 PTPRKQ15262 1439 aa20.21■□□□□ 0.83
GINS4-207ENST00000520736 C9orf84Q5VXU9 1444 aa20.21■□□□□ 0.83
GINS4-207ENST00000520736 RAPGEF3O95398 923 aa20.2■□□□□ 0.82
GINS4-207ENST00000520736 AFAP1Q8N556 730 aa20.19■□□□□ 0.82
GINS4-207ENST00000520736 FAM50AQ14320 339 aaKnown RBP20.17■□□□□ 0.82
GINS4-207ENST00000520736 YEATS2Q9ULM3 1422 aa20.17■□□□□ 0.82
GINS4-207ENST00000520736 BCORL1Q5H9F3 1711 aa20.16■□□□□ 0.82
GINS4-207ENST00000520736 ROCK1Q13464 1354 aa20.16■□□□□ 0.82
GINS4-207ENST00000520736 GCC2Q8IWJ2 1684 aa20.16■□□□□ 0.82
GINS4-207ENST00000520736 SIGLEC1Q9BZZ2 1709 aa20.14■□□□□ 0.81
GINS4-207ENST00000520736 SPAG9O60271 1321 aaKnown RBP20.14■□□□□ 0.81
GINS4-207ENST00000520736 NCOA1Q15788 1441 aa20.13■□□□□ 0.81
GINS4-207ENST00000520736 EIF2AK4Q9P2K8 1649 aaKnown RBP20.12■□□□□ 0.81
GINS4-207ENST00000520736 DUOX2Q9NRD8 1548 aa20.11■□□□□ 0.81
GINS4-207ENST00000520736 AGLP35573 1532 aa20.1■□□□□ 0.81
GINS4-207ENST00000520736 ATP10AO60312 1499 aa20.1■□□□□ 0.81
GINS4-207ENST00000520736 TSPY4P0CV99 314 aa20.09■□□□□ 0.81
GINS4-207ENST00000520736 TSPY10P0CW01 314 aa20.09■□□□□ 0.81
GINS4-207ENST00000520736 A2MP01023 1474 aa20.08■□□□□ 0.81
GINS4-207ENST00000520736 ANKRD30AQ9BXX3 1397 aa20.08■□□□□ 0.8
GINS4-207ENST00000520736 HFM1A2PYH4 1435 aa20.07■□□□□ 0.8
GINS4-207ENST00000520736 ERBINQ96RT1 1412 aa20.06■□□□□ 0.8
GINS4-207ENST00000520736 KIF15Q9NS87 1388 aa20.06■□□□□ 0.8
GINS4-207ENST00000520736 RNF17Q9BXT8 1623 aaKnown RBP20.05■□□□□ 0.8
GINS4-207ENST00000520736 DEPDC5O75140 1603 aa20.05■□□□□ 0.8
GINS4-207ENST00000520736 NAIPQ13075 1403 aa20.03■□□□□ 0.8
GINS4-207ENST00000520736 DHX29Q7Z478 1369 aaKnown RBP20.02■□□□□ 0.8
GINS4-207ENST00000520736 TRIM26Q12899 539 aaPredicted RBP20.01■□□□□ 0.79
GINS4-207ENST00000520736 MROH1Q8NDA8 1641 aa20.01■□□□□ 0.79
GINS4-207ENST00000520736 UNC13BO14795 1591 aa20■□□□□ 0.79
GINS4-207ENST00000520736 PRDM15P57071 1507 aaPredicted RBP19.99■□□□□ 0.79
GINS4-207ENST00000520736 KDM4FA0A1W2PPD8 638 aa19.99■□□□□ 0.79
GINS4-207ENST00000520736 CHIC2Q9UKJ5 165 aa19.98■□□□□ 0.79
GINS4-207ENST00000520736 ANKRD50Q9ULJ7 1429 aa19.98■□□□□ 0.79
GINS4-207ENST00000520736 FAM135AQ9P2D6 1515 aa19.97■□□□□ 0.79
GINS4-207ENST00000520736 ITGAEP38570 1179 aa19.96■□□□□ 0.79
GINS4-207ENST00000520736 VWDEQ8N2E2 1590 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms