RNA–Protein interactions for RNA: ENST00000520736.1

GINS4-207, Transcript of GINS complex subunit 4, humanhuman

TSL 5

Gene GINS4, Length 375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS4-207ENST00000520736 NISCHQ9Y2I1 1504 aa31.7■■■□□ 2.67
GINS4-207ENST00000520736 CCDC180Q9P1Z9 1646 aa28.14■■■□□ 2.09
GINS4-207ENST00000520736 ABCC9O60706 1549 aa26.85■■□□□ 1.89
GINS4-207ENST00000520736 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
GINS4-207ENST00000520736 DCAF1Q9Y4B6 1507 aa26.36■■□□□ 1.81
GINS4-207ENST00000520736 MYO15BQ96JP2 1530 aa26.34■■□□□ 1.81
GINS4-207ENST00000520736 NACADO15069 1562 aa26.25■■□□□ 1.79
GINS4-207ENST00000520736 RB1CC1Q8TDY2 1594 aa26.15■■□□□ 1.78
GINS4-207ENST00000520736 DCAF8L2P0C7V8 631 aa25.89■■□□□ 1.74
GINS4-207ENST00000520736 UNC13AQ9UPW8 1703 aa25.67■■□□□ 1.7
GINS4-207ENST00000520736 SCRIBQ14160 1630 aa25.54■■□□□ 1.68
GINS4-207ENST00000520736 BICRAQ9NZM4 1560 aa25.41■■□□□ 1.66
GINS4-207ENST00000520736 SHROOM4Q9ULL8 1493 aa25.25■■□□□ 1.63
GINS4-207ENST00000520736 PABPN1Q86U42 306 aaKnown RBP eCLIP25.04■■□□□ 1.6
GINS4-207ENST00000520736 DNAJC5BQ9UF47 199 aa24.85■■□□□ 1.57
GINS4-207ENST00000520736 EIF4G1Q04637 1599 aaKnown RBP24.66■■□□□ 1.54
GINS4-207ENST00000520736 CECR2Q9BXF3 1484 aa24.58■■□□□ 1.53
GINS4-207ENST00000520736 BAZ1AQ9NRL2 1556 aaPredicted RBP24.55■■□□□ 1.52
GINS4-207ENST00000520736 SMARCA4P51532 1647 aa24.55■■□□□ 1.52
GINS4-207ENST00000520736 CC2D2AQ9P2K1 1620 aa24.42■■□□□ 1.5
GINS4-207ENST00000520736 MROH2BQ7Z745 1585 aa24.42■■□□□ 1.5
GINS4-207ENST00000520736 PEG3Q9GZU2 1588 aa24.38■■□□□ 1.49
GINS4-207ENST00000520736 SMARCA2P51531 1590 aa24.27■■□□□ 1.48
GINS4-207ENST00000520736 RSF1Q96T23 1441 aaPredicted RBP24.27■■□□□ 1.48
GINS4-207ENST00000520736 ATAD2BQ9ULI0 1458 aa24.24■■□□□ 1.47
GINS4-207ENST00000520736 HMGXB3Q12766 1538 aa24.19■■□□□ 1.46
GINS4-207ENST00000520736 NCAPD3P42695 1498 aa24.19■■□□□ 1.46
GINS4-207ENST00000520736 WIZO95785 1651 aa24.18■■□□□ 1.46
GINS4-207ENST00000520736 BAZ1BQ9UIG0 1483 aaKnown RBP24.04■■□□□ 1.44
GINS4-207ENST00000520736 TOP2AP11388 1531 aaKnown RBP24■■□□□ 1.43
GINS4-207ENST00000520736 SUPT5HO00267 1087 aaKnown RBP23.69■■□□□ 1.38
GINS4-207ENST00000520736 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
GINS4-207ENST00000520736 LAMC3Q9Y6N6 1575 aa23.52■■□□□ 1.36
GINS4-207ENST00000520736 CFTRP13569 1480 aa23.46■■□□□ 1.35
GINS4-207ENST00000520736 PRDM2Q13029 1718 aa23.46■■□□□ 1.35
GINS4-207ENST00000520736 CADPSQ9ULU8 1353 aa23.43■■□□□ 1.34
GINS4-207ENST00000520736 NESP48681 1621 aa23.41■■□□□ 1.34
GINS4-207ENST00000520736 KIF21AQ7Z4S6 1674 aa23.25■■□□□ 1.31
GINS4-207ENST00000520736 PDS5BQ9NTI5 1447 aa23.23■■□□□ 1.31
GINS4-207ENST00000520736 FANCD2Q9BXW9 1451 aa23.18■■□□□ 1.3
GINS4-207ENST00000520736 CEP164Q9UPV0 1460 aa23.12■■□□□ 1.29
GINS4-207ENST00000520736 THOC2Q8NI27 1593 aaKnown RBP23.12■■□□□ 1.29
GINS4-207ENST00000520736 ERCC6Q03468 1493 aa23.09■■□□□ 1.29
GINS4-207ENST00000520736 DNAJC5Q9H3Z4 198 aa23.08■■□□□ 1.29
GINS4-207ENST00000520736 MRC2Q9UBG0 1479 aa23.03■■□□□ 1.28
GINS4-207ENST00000520736 WDR62O43379 1518 aa23.01■■□□□ 1.27
GINS4-207ENST00000520736 URB2Q14146 1524 aaKnown RBP22.97■■□□□ 1.27
GINS4-207ENST00000520736 DNMBPQ6XZF7 1577 aa22.94■■□□□ 1.26
GINS4-207ENST00000520736 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
GINS4-207ENST00000520736 BIVM-ERCC5R4GMW8 1640 aa22.9■■□□□ 1.26
GINS4-207ENST00000520736 CUX1P39880 1505 aa22.89■■□□□ 1.26
GINS4-207ENST00000520736 TOPBP1Q92547 1522 aa22.89■■□□□ 1.26
GINS4-207ENST00000520736 TOP2BQ02880 1626 aa22.85■■□□□ 1.25
GINS4-207ENST00000520736 SYNJ1O43426 1573 aa22.84■■□□□ 1.25
GINS4-207ENST00000520736 WRNQ14191 1432 aaPredicted RBP eCLIP22.84■■□□□ 1.25
GINS4-207ENST00000520736 CUX2O14529 1486 aa22.84■■□□□ 1.25
GINS4-207ENST00000520736 POLA1P09884 1462 aaPredicted RBP22.73■■□□□ 1.23
GINS4-207ENST00000520736 FGD5Q6ZNL6 1462 aa22.72■■□□□ 1.23
GINS4-207ENST00000520736 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
GINS4-207ENST00000520736 TARBP1Q13395 1621 aaKnown RBP22.68■■□□□ 1.22
GINS4-207ENST00000520736 IFT140Q96RY7 1462 aa22.64■■□□□ 1.21
GINS4-207ENST00000520736 ABCA10Q8WWZ4 1543 aa22.57■■□□□ 1.2
GINS4-207ENST00000520736 RAD54L2Q9Y4B4 1467 aa22.55■■□□□ 1.2
GINS4-207ENST00000520736 SOGA1O94964 1423 aa22.54■■□□□ 1.2
GINS4-207ENST00000520736 ABCA5Q8WWZ7 1642 aa22.51■■□□□ 1.19
GINS4-207ENST00000520736 EIF4G3O43432 1585 aaKnown RBP22.49■■□□□ 1.19
GINS4-207ENST00000520736 CHIC1Q5VXU3 224 aa22.47■■□□□ 1.19
GINS4-207ENST00000520736 ZNF608Q9ULD9 1512 aaPredicted RBP22.47■■□□□ 1.19
GINS4-207ENST00000520736 TRIM41Q8WV44 630 aa22.4■■□□□ 1.18
GINS4-207ENST00000520736 PBRM1Q86U86 1689 aa22.39■■□□□ 1.18
GINS4-207ENST00000520736 GAPVD1Q14C86 1478 aa22.34■■□□□ 1.17
GINS4-207ENST00000520736 TDRD9Q8NDG6 1382 aaKnown RBP22.33■■□□□ 1.17
GINS4-207ENST00000520736 AQRO60306 1485 aaKnown RBP eCLIP22.33■■□□□ 1.16
GINS4-207ENST00000520736 KIF27Q86VH2 1401 aa22.31■■□□□ 1.16
GINS4-207ENST00000520736 ERICH3Q5RHP9 1530 aa22.31■■□□□ 1.16
GINS4-207ENST00000520736 GRIN2BQ13224 1484 aa22.3■■□□□ 1.16
GINS4-207ENST00000520736 MAGI1Q96QZ7 1491 aaPredicted RBP22.24■■□□□ 1.15
GINS4-207ENST00000520736 ADAMTS12P58397 1594 aa22.24■■□□□ 1.15
GINS4-207ENST00000520736 EEA1Q15075 1411 aa22.23■■□□□ 1.15
GINS4-207ENST00000520736 RUSC2Q8N2Y8 1516 aa22.23■■□□□ 1.15
GINS4-207ENST00000520736 CUL7Q14999 1698 aa22.23■■□□□ 1.15
GINS4-207ENST00000520736 SNAPC4Q5SXM2 1469 aa22.21■■□□□ 1.15
GINS4-207ENST00000520736 IGF1RP08069 1367 aa22.15■■□□□ 1.14
GINS4-207ENST00000520736 SYNJ2O15056 1496 aa22.13■■□□□ 1.13
GINS4-207ENST00000520736 CHD1O14646 1710 aa22.12■■□□□ 1.13
GINS4-207ENST00000520736 FHAD1B1AJZ9 1412 aa22.12■■□□□ 1.13
GINS4-207ENST00000520736 PRXQ9BXM0 1461 aa22.07■■□□□ 1.12
GINS4-207ENST00000520736 GRIN2AQ12879 1464 aa22.04■■□□□ 1.12
GINS4-207ENST00000520736 KIF21BO75037 1637 aa22.04■■□□□ 1.12
GINS4-207ENST00000520736 CARMIL1Q5VZK9 1371 aa22■■□□□ 1.11
GINS4-207ENST00000520736 RAPGEF2Q9Y4G8 1499 aa21.98■■□□□ 1.11
GINS4-207ENST00000520736 CSRNP3Q8WYN3 585 aa21.97■■□□□ 1.11
GINS4-207ENST00000520736 NUP160Q12769 1436 aa21.96■■□□□ 1.11
GINS4-207ENST00000520736 CEP170Q5SW79 1584 aa21.95■■□□□ 1.1
GINS4-207ENST00000520736 CLASP1Q7Z460 1538 aa21.92■■□□□ 1.1
GINS4-207ENST00000520736 CHMP7Q8WUX9 453 aaPredicted RBP21.88■■□□□ 1.09
GINS4-207ENST00000520736 CTTNBP2Q8WZ74 1663 aa21.88■■□□□ 1.09
GINS4-207ENST00000520736 FAM9AQ8IZU1 332 aaPredicted RBP21.84■■□□□ 1.09
GINS4-207ENST00000520736 GOLGA3Q08378 1498 aa21.83■■□□□ 1.09
GINS4-207ENST00000520736 SHROOM2Q13796 1616 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms