RNA–Protein interactions for RNA: ENST00000520205.1

VTA1P2-201, Transcript of vesicle trafficking 1 pseudogene 2, humanhuman

BASIC

Gene VTA1P2, Length 911 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1P2-201ENST00000520205 NLRP6P59044 892 aa12.97□□□□□ -0.33
VTA1P2-201ENST00000520205 RYDENQ9NUL5 291 aaKnown RBP12.97□□□□□ -0.33
VTA1P2-201ENST00000520205 TMEM121BQ9BXQ6 578 aaPredicted RBP12.96□□□□□ -0.33
VTA1P2-201ENST00000520205 TSHZ2Q9NRE2 1034 aa12.96□□□□□ -0.33
VTA1P2-201ENST00000520205 POTEMA6NI47 508 aa12.95□□□□□ -0.34
VTA1P2-201ENST00000520205 POTEGQ6S5H5 508 aa12.94□□□□□ -0.34
VTA1P2-201ENST00000520205 TMEM92Q6UXU6 159 aa12.93□□□□□ -0.34
VTA1P2-201ENST00000520205 ST18O60284 1047 aa12.91□□□□□ -0.34
VTA1P2-201ENST00000520205 PPP1R37O75864 691 aa12.89□□□□□ -0.35
VTA1P2-201ENST00000520205 KDM2AQ9Y2K7 1162 aa12.88□□□□□ -0.35
VTA1P2-201ENST00000520205 MARVELD3Q96A59 401 aa12.81□□□□□ -0.36
VTA1P2-201ENST00000520205 HOXB3P14651 431 aaPredicted RBP12.8□□□□□ -0.36
VTA1P2-201ENST00000520205 SNPHO15079 494 aa12.79□□□□□ -0.36
VTA1P2-201ENST00000520205 C2orf72A6NCS6 295 aa12.72□□□□□ -0.37
VTA1P2-201ENST00000520205 KIF3CO14782 793 aa12.68□□□□□ -0.38
VTA1P2-201ENST00000520205 EMP3P54852 163 aa12.67□□□□□ -0.38
VTA1P2-201ENST00000520205 ZNF710Q8N1W2 664 aa12.66□□□□□ -0.38
VTA1P2-201ENST00000520205 POTEB3A0JP26 581 aa12.65□□□□□ -0.38
VTA1P2-201ENST00000520205 DOK7Q18PE1 504 aa12.65□□□□□ -0.38
VTA1P2-201ENST00000520205 POTEBQ6S5H4 581 aa12.65□□□□□ -0.38
VTA1P2-201ENST00000520205 BCANQ96GW7 911 aa12.65□□□□□ -0.38
VTA1P2-201ENST00000520205 CDAN1Q8IWY9 1227 aa12.64□□□□□ -0.39
VTA1P2-201ENST00000520205 CADPS2Q86UW7 1296 aa12.63□□□□□ -0.39
VTA1P2-201ENST00000520205 FAM205CA6NFA0 338 aa12.62□□□□□ -0.39
VTA1P2-201ENST00000520205 TMC2Q8TDI7 906 aa12.62□□□□□ -0.39
VTA1P2-201ENST00000520205 KHSRPQ92945 711 aaKnown RBP eCLIP12.62□□□□□ -0.39
VTA1P2-201ENST00000520205 PLSCR2Q9NRY7 297 aa12.62□□□□□ -0.39
VTA1P2-201ENST00000520205 HOXB1P14653 301 aaPredicted RBP12.59□□□□□ -0.39
VTA1P2-201ENST00000520205 ARSIQ5FYB1 569 aa12.59□□□□□ -0.39
VTA1P2-201ENST00000520205 HS3ST6Q96QI5 342 aa12.57□□□□□ -0.4
VTA1P2-201ENST00000520205 GPR153Q6NV75 609 aa12.56□□□□□ -0.4
VTA1P2-201ENST00000520205 RIMBP2O15034 1052 aa12.55□□□□□ -0.4
VTA1P2-201ENST00000520205 WDR70Q9NW82 654 aa12.53□□□□□ -0.4
VTA1P2-201ENST00000520205 PCDH10Q9P2E7 1040 aa12.53□□□□□ -0.4
VTA1P2-201ENST00000520205 DSG2Q14126 1118 aa12.52□□□□□ -0.41
VTA1P2-201ENST00000520205 PLPP6Q8IY26 295 aa12.5□□□□□ -0.41
VTA1P2-201ENST00000520205 GPHNQ9NQX3 736 aaPredicted RBP12.5□□□□□ -0.41
VTA1P2-201ENST00000520205 ERBB3P21860 1342 aa12.5□□□□□ -0.41
VTA1P2-201ENST00000520205 NCKAP5LQ9HCH0 1330 aa12.48□□□□□ -0.41
VTA1P2-201ENST00000520205 VARS2Q5ST30 1063 aaKnown RBP12.48□□□□□ -0.41
VTA1P2-201ENST00000520205 ZSWIM6Q9HCJ5 1215 aa12.48□□□□□ -0.41
VTA1P2-201ENST00000520205 NUDT7P0C024 238 aa12.47□□□□□ -0.41
VTA1P2-201ENST00000520205 PCDHGA4Q9Y5G9 962 aa12.47□□□□□ -0.41
VTA1P2-201ENST00000520205 FOXK1P85037 733 aa12.46□□□□□ -0.41
VTA1P2-201ENST00000520205 NBR1Q14596 966 aa12.46□□□□□ -0.41
VTA1P2-201ENST00000520205 P3H3Q8IVL6 736 aa12.46□□□□□ -0.41
VTA1P2-201ENST00000520205 CRISPLD2Q9H0B8 497 aa12.46□□□□□ -0.41
VTA1P2-201ENST00000520205 PDE4AP27815 886 aa12.45□□□□□ -0.42
VTA1P2-201ENST00000520205 KRTAP3-3Q9BYR6 98 aa12.44□□□□□ -0.42
VTA1P2-201ENST00000520205 KRTAP3-2Q9BYR7 98 aa12.44□□□□□ -0.42
VTA1P2-201ENST00000520205 SLC34A2O95436 690 aa12.42□□□□□ -0.42
VTA1P2-201ENST00000520205 LARP6Q9BRS8 491 aaKnown RBP12.41□□□□□ -0.42
VTA1P2-201ENST00000520205 KCNV2Q8TDN2 545 aa12.4□□□□□ -0.42
VTA1P2-201ENST00000520205 ZNF316A6NFI3 1004 aaPredicted RBP12.39□□□□□ -0.43
VTA1P2-201ENST00000520205 MFSD10Q14728 455 aa12.39□□□□□ -0.43
VTA1P2-201ENST00000520205 PPP1R15BQ5SWA1 713 aa12.39□□□□□ -0.43
VTA1P2-201ENST00000520205 UPF1Q92900 1129 aaKnown RBP eCLIP12.39□□□□□ -0.43
VTA1P2-201ENST00000520205 LHX6Q9UPM6 363 aa12.38□□□□□ -0.43
VTA1P2-201ENST00000520205 E2F4Q16254 413 aa12.37□□□□□ -0.43
VTA1P2-201ENST00000520205 DDX27Q96GQ7 796 aaKnown RBP12.36□□□□□ -0.43
VTA1P2-201ENST00000520205 PTCD2Q8WV60 388 aaKnown RBP12.35□□□□□ -0.43
VTA1P2-201ENST00000520205 SPNS2Q8IVW8 549 aa12.34□□□□□ -0.43
VTA1P2-201ENST00000520205 KDM4FA0A1W2PPD8 638 aa12.31□□□□□ -0.44
VTA1P2-201ENST00000520205 ZNF687Q8N1G0 1237 aa12.31□□□□□ -0.44
VTA1P2-201ENST00000520205 ARHGEF1Q92888 912 aaKnown RBP12.31□□□□□ -0.44
VTA1P2-201ENST00000520205 OXER1Q8TDS5 423 aa12.3□□□□□ -0.44
VTA1P2-201ENST00000520205 CAMK2BQ13554 666 aa12.27□□□□□ -0.45
VTA1P2-201ENST00000520205 AXIN2Q9Y2T1 843 aa12.27□□□□□ -0.45
VTA1P2-201ENST00000520205 POTEEQ6S8J3 1075 aa12.26□□□□□ -0.45
VTA1P2-201ENST00000520205 EMILIN3Q9NT22 766 aa12.26□□□□□ -0.45
VTA1P2-201ENST00000520205 MMRN1Q13201 1228 aa12.25□□□□□ -0.45
VTA1P2-201ENST00000520205 TBC1D12O60347 775 aa12.23□□□□□ -0.45
VTA1P2-201ENST00000520205 ARIH1Q9Y4X5 557 aaPredicted RBP12.23□□□□□ -0.45
VTA1P2-201ENST00000520205 ANKRD13DQ6ZTN6 518 aa12.19□□□□□ -0.46
VTA1P2-201ENST00000520205 TPRNQ4KMQ1 711 aa12.18□□□□□ -0.46
VTA1P2-201ENST00000520205 EVI5O60447 810 aa12.17□□□□□ -0.46
VTA1P2-201ENST00000520205 PRKCSHP14314 528 aaPredicted RBP12.17□□□□□ -0.46
VTA1P2-201ENST00000520205 PSEN2P49810 448 aa12.15□□□□□ -0.46
VTA1P2-201ENST00000520205 MAP3K9P80192 1104 aa12.15□□□□□ -0.46
VTA1P2-201ENST00000520205 LSM11P83369 360 aaKnown RBP eCLIP12.15□□□□□ -0.46
VTA1P2-201ENST00000520205 ZNF454Q8N9F8 522 aa12.14□□□□□ -0.47
VTA1P2-201ENST00000520205 SEMA3EO15041 775 aa12.13□□□□□ -0.47
VTA1P2-201ENST00000520205 TESPA1A2RU30 521 aaPredicted RBP12.12□□□□□ -0.47
VTA1P2-201ENST00000520205 DPYSL4O14531 572 aa12.12□□□□□ -0.47
VTA1P2-201ENST00000520205 PPP4R3BQ5MIZ7 849 aa12.12□□□□□ -0.47
VTA1P2-201ENST00000520205 DMRTA1Q5VZB9 504 aa12.12□□□□□ -0.47
VTA1P2-201ENST00000520205 TULP1O00294 542 aaPredicted RBP12.11□□□□□ -0.47
VTA1P2-201ENST00000520205 PSDA5PKW4 1024 aaPredicted RBP12.1□□□□□ -0.47
VTA1P2-201ENST00000520205 PBX2P40425 430 aa12.1□□□□□ -0.47
VTA1P2-201ENST00000520205 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.09□□□□□ -0.47
VTA1P2-201ENST00000520205 KCNK17Q96T54 332 aa12.09□□□□□ -0.47
VTA1P2-201ENST00000520205 ANO8Q9HCE9 1232 aaPredicted RBP12.09□□□□□ -0.47
VTA1P2-201ENST00000520205 ARHGAP33O14559 1287 aa12.08□□□□□ -0.48
VTA1P2-201ENST00000520205 FOSBP53539 338 aa12.08□□□□□ -0.48
VTA1P2-201ENST00000520205 LMOD2Q6P5Q4 547 aa12.06□□□□□ -0.48
VTA1P2-201ENST00000520205 SPDYE16A6NNV3 312 aaPredicted RBP12.05□□□□□ -0.48
VTA1P2-201ENST00000520205 PDIA6Q15084 440 aa12.04□□□□□ -0.48
VTA1P2-201ENST00000520205 SMYD5Q6GMV2 418 aa12.04□□□□□ -0.48
VTA1P2-201ENST00000520205 ADAM33Q9BZ11 813 aa12.04□□□□□ -0.48
VTA1P2-201ENST00000520205 MYT1LQ9UL68 1186 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms