RNA–Protein interactions for RNA: ENST00000520096.5

LINC00535-203, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 790 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-203ENST00000520096 TSHZ2Q9NRE2 1034 aa13.35□□□□□ -0.27
LINC00535-203ENST00000520096 KDM2AQ9Y2K7 1162 aa13.34□□□□□ -0.27
LINC00535-203ENST00000520096 EMP3P54852 163 aa13.31□□□□□ -0.28
LINC00535-203ENST00000520096 HOXB3P14651 431 aaPredicted RBP13.3□□□□□ -0.28
LINC00535-203ENST00000520096 BCL11BQ9C0K0 894 aaPredicted RBP13.3□□□□□ -0.28
LINC00535-203ENST00000520096 STK24Q9Y6E0 443 aa13.29□□□□□ -0.28
LINC00535-203ENST00000520096 POTEB3A0JP26 581 aa13.27□□□□□ -0.29
LINC00535-203ENST00000520096 SOX12O15370 315 aa13.27□□□□□ -0.29
LINC00535-203ENST00000520096 POTEBQ6S5H4 581 aa13.27□□□□□ -0.29
LINC00535-203ENST00000520096 MS4A4AQ96JQ5 239 aa13.27□□□□□ -0.29
LINC00535-203ENST00000520096 MICALL2Q8IY33 904 aa13.26□□□□□ -0.29
LINC00535-203ENST00000520096 PHF8Q9UPP1 1060 aa13.25□□□□□ -0.29
LINC00535-203ENST00000520096 GTPBP6O43824 516 aaPredicted RBP13.24□□□□□ -0.29
LINC00535-203ENST00000520096 HS3ST6Q96QI5 342 aa13.24□□□□□ -0.29
LINC00535-203ENST00000520096 FAM205CA6NFA0 338 aa13.23□□□□□ -0.29
LINC00535-203ENST00000520096 TMEM92Q6UXU6 159 aa13.23□□□□□ -0.29
LINC00535-203ENST00000520096 SPNS2Q8IVW8 549 aa13.23□□□□□ -0.29
LINC00535-203ENST00000520096 HOXB1P14653 301 aaPredicted RBP13.18□□□□□ -0.3
LINC00535-203ENST00000520096 MMRN1Q13201 1228 aa13.18□□□□□ -0.3
LINC00535-203ENST00000520096 KRTAP3-3Q9BYR6 98 aa13.18□□□□□ -0.3
LINC00535-203ENST00000520096 KRTAP3-2Q9BYR7 98 aa13.18□□□□□ -0.3
LINC00535-203ENST00000520096 DOK7Q18PE1 504 aa13.17□□□□□ -0.3
LINC00535-203ENST00000520096 ZNF710Q8N1W2 664 aa13.16□□□□□ -0.3
LINC00535-203ENST00000520096 BCANQ96GW7 911 aa13.15□□□□□ -0.3
LINC00535-203ENST00000520096 FBXO22Q8NEZ5 403 aa13.14□□□□□ -0.31
LINC00535-203ENST00000520096 NLRP6P59044 892 aa13.11□□□□□ -0.31
LINC00535-203ENST00000520096 MFRPQ9BY79 579 aa13.09□□□□□ -0.31
LINC00535-203ENST00000520096 RYDENQ9NUL5 291 aaKnown RBP13.08□□□□□ -0.32
LINC00535-203ENST00000520096 RIMBP2O15034 1052 aa13.07□□□□□ -0.32
LINC00535-203ENST00000520096 ZSWIM6Q9HCJ5 1215 aa13.05□□□□□ -0.32
LINC00535-203ENST00000520096 ERBB3P21860 1342 aa13.05□□□□□ -0.32
LINC00535-203ENST00000520096 GPR153Q6NV75 609 aa13.03□□□□□ -0.32
LINC00535-203ENST00000520096 VARS2Q5ST30 1063 aaKnown RBP13□□□□□ -0.33
LINC00535-203ENST00000520096 KIF3CO14782 793 aa12.96□□□□□ -0.33
LINC00535-203ENST00000520096 ARSIQ5FYB1 569 aa12.94□□□□□ -0.34
LINC00535-203ENST00000520096 C2orf72A6NCS6 295 aa12.91□□□□□ -0.34
LINC00535-203ENST00000520096 ZNF687Q8N1G0 1237 aa12.91□□□□□ -0.34
LINC00535-203ENST00000520096 KHSRPQ92945 711 aaKnown RBP eCLIP12.91□□□□□ -0.34
LINC00535-203ENST00000520096 CADPS2Q86UW7 1296 aa12.9□□□□□ -0.34
LINC00535-203ENST00000520096 PPP1R37O75864 691 aa12.87□□□□□ -0.35
LINC00535-203ENST00000520096 PRKCSHP14314 528 aaPredicted RBP12.87□□□□□ -0.35
LINC00535-203ENST00000520096 ZNF316A6NFI3 1004 aaPredicted RBP12.84□□□□□ -0.35
LINC00535-203ENST00000520096 NBR1Q14596 966 aa12.83□□□□□ -0.36
LINC00535-203ENST00000520096 SLC34A2O95436 690 aa12.79□□□□□ -0.36
LINC00535-203ENST00000520096 NUDT7P0C024 238 aa12.79□□□□□ -0.36
LINC00535-203ENST00000520096 TMC2Q8TDI7 906 aa12.79□□□□□ -0.36
LINC00535-203ENST00000520096 TPRNQ4KMQ1 711 aa12.77□□□□□ -0.37
LINC00535-203ENST00000520096 RNF166Q96A37 237 aaPredicted RBP12.77□□□□□ -0.37
LINC00535-203ENST00000520096 PCDHGA4Q9Y5G9 962 aa12.77□□□□□ -0.37
LINC00535-203ENST00000520096 WDR70Q9NW82 654 aa12.74□□□□□ -0.37
LINC00535-203ENST00000520096 MYT1LQ9UL68 1186 aa12.74□□□□□ -0.37
LINC00535-203ENST00000520096 LHX6Q9UPM6 363 aa12.73□□□□□ -0.37
LINC00535-203ENST00000520096 POTEEQ6S8J3 1075 aa12.7□□□□□ -0.38
LINC00535-203ENST00000520096 ANKRD13DQ6ZTN6 518 aa12.7□□□□□ -0.38
LINC00535-203ENST00000520096 P3H3Q8IVL6 736 aa12.7□□□□□ -0.38
LINC00535-203ENST00000520096 KCNV2Q8TDN2 545 aa12.7□□□□□ -0.38
LINC00535-203ENST00000520096 LSM11P83369 360 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC00535-203ENST00000520096 PTGER2P43116 358 aa12.67□□□□□ -0.38
LINC00535-203ENST00000520096 KDM4FA0A1W2PPD8 638 aa12.65□□□□□ -0.38
LINC00535-203ENST00000520096 PBX2P40425 430 aa12.65□□□□□ -0.38
LINC00535-203ENST00000520096 FOXK1P85037 733 aa12.65□□□□□ -0.38
LINC00535-203ENST00000520096 PTCD2Q8WV60 388 aaKnown RBP12.64□□□□□ -0.39
LINC00535-203ENST00000520096 GPHNQ9NQX3 736 aaPredicted RBP12.64□□□□□ -0.39
LINC00535-203ENST00000520096 NCKAP5LQ9HCH0 1330 aa12.63□□□□□ -0.39
LINC00535-203ENST00000520096 AXIN2Q9Y2T1 843 aa12.63□□□□□ -0.39
LINC00535-203ENST00000520096 PLPP6Q8IY26 295 aa12.62□□□□□ -0.39
LINC00535-203ENST00000520096 DSG2Q14126 1118 aa12.6□□□□□ -0.39
LINC00535-203ENST00000520096 LARP6Q9BRS8 491 aaKnown RBP12.58□□□□□ -0.4
LINC00535-203ENST00000520096 PDE4AP27815 886 aa12.57□□□□□ -0.4
LINC00535-203ENST00000520096 E2F4Q16254 413 aa12.57□□□□□ -0.4
LINC00535-203ENST00000520096 CRISPLD2Q9H0B8 497 aa12.57□□□□□ -0.4
LINC00535-203ENST00000520096 PSDA5PKW4 1024 aaPredicted RBP12.55□□□□□ -0.4
LINC00535-203ENST00000520096 MFSD10Q14728 455 aa12.54□□□□□ -0.4
LINC00535-203ENST00000520096 ARHGAP33O14559 1287 aa12.53□□□□□ -0.4
LINC00535-203ENST00000520096 ARHGEF1Q92888 912 aaKnown RBP12.52□□□□□ -0.41
LINC00535-203ENST00000520096 DDX27Q96GQ7 796 aaKnown RBP12.51□□□□□ -0.41
LINC00535-203ENST00000520096 ADGRD1Q6QNK2 874 aa12.5□□□□□ -0.41
LINC00535-203ENST00000520096 TBC1D12O60347 775 aa12.47□□□□□ -0.41
LINC00535-203ENST00000520096 PSEN2P49810 448 aa12.47□□□□□ -0.41
LINC00535-203ENST00000520096 DMRTA1Q5VZB9 504 aa12.47□□□□□ -0.41
LINC00535-203ENST00000520096 OXER1Q8TDS5 423 aa12.47□□□□□ -0.41
LINC00535-203ENST00000520096 PPP4R3BQ5MIZ7 849 aa12.45□□□□□ -0.42
LINC00535-203ENST00000520096 TK2O00142 265 aa12.43□□□□□ -0.42
LINC00535-203ENST00000520096 PPP1R15BQ5SWA1 713 aa12.43□□□□□ -0.42
LINC00535-203ENST00000520096 UPF1Q92900 1129 aaKnown RBP eCLIP12.43□□□□□ -0.42
LINC00535-203ENST00000520096 SEMA3EO15041 775 aa12.42□□□□□ -0.42
LINC00535-203ENST00000520096 HRO43593 1189 aa12.42□□□□□ -0.42
LINC00535-203ENST00000520096 CAMK2BQ13554 666 aa12.42□□□□□ -0.42
LINC00535-203ENST00000520096 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.42□□□□□ -0.42
LINC00535-203ENST00000520096 LMOD2Q6P5Q4 547 aa12.41□□□□□ -0.42
LINC00535-203ENST00000520096 ARIH1Q9Y4X5 557 aaPredicted RBP12.38□□□□□ -0.43
LINC00535-203ENST00000520096 TESPA1A2RU30 521 aaPredicted RBP12.37□□□□□ -0.43
LINC00535-203ENST00000520096 KCNK17Q96T54 332 aa12.37□□□□□ -0.43
LINC00535-203ENST00000520096 HCSTQ9UBK5 93 aa12.35□□□□□ -0.43
LINC00535-203ENST00000520096 ZNF454Q8N9F8 522 aa12.34□□□□□ -0.43
LINC00535-203ENST00000520096 TULP1O00294 542 aaPredicted RBP12.33□□□□□ -0.44
LINC00535-203ENST00000520096 BCL2L12Q9HB09 334 aa12.31□□□□□ -0.44
LINC00535-203ENST00000520096 EMILIN3Q9NT22 766 aa12.31□□□□□ -0.44
LINC00535-203ENST00000520096 FOSBP53539 338 aa12.3□□□□□ -0.44
LINC00535-203ENST00000520096 KCNH8Q96L42 1107 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms