RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 MAMSTRQ6ZN01 415 aa12.85□□□□□ -0.35
NPM1-206ENST00000519955 FAM163AQ96GL9 167 aaPredicted RBP12.85□□□□□ -0.35
NPM1-206ENST00000519955 PCDH10Q9P2E7 1040 aa12.85□□□□□ -0.35
NPM1-206ENST00000519955 G3V3G9 751 aa12.84□□□□□ -0.35
NPM1-206ENST00000519955 PDE4AP27815 886 aa12.84□□□□□ -0.35
NPM1-206ENST00000519955 MICALL2Q8IY33 904 aa12.84□□□□□ -0.35
NPM1-206ENST00000519955 L3MBTL3Q96JM7 780 aaPredicted RBP12.84□□□□□ -0.35
NPM1-206ENST00000519955 BOLA1Q9Y3E2 137 aa12.84□□□□□ -0.35
NPM1-206ENST00000519955 COLQQ9Y215 455 aaPredicted RBP12.83□□□□□ -0.36
NPM1-206ENST00000519955 NCKAP5LQ9HCH0 1330 aa12.83□□□□□ -0.36
NPM1-206ENST00000519955 TMEM121BQ9BXQ6 578 aaPredicted RBP12.82□□□□□ -0.36
NPM1-206ENST00000519955 P3H3Q8IVL6 736 aa12.81□□□□□ -0.36
NPM1-206ENST00000519955 CRISPLD2Q9H0B8 497 aa12.81□□□□□ -0.36
NPM1-206ENST00000519955 SCUBE2Q9NQ36 999 aa12.8□□□□□ -0.36
NPM1-206ENST00000519955 LARP6Q9BRS8 491 aaKnown RBP12.79□□□□□ -0.36
NPM1-206ENST00000519955 MFSD10Q14728 455 aa12.77□□□□□ -0.37
NPM1-206ENST00000519955 DDX27Q96GQ7 796 aaKnown RBP12.76□□□□□ -0.37
NPM1-206ENST00000519955 NBR1Q14596 966 aa12.74□□□□□ -0.37
NPM1-206ENST00000519955 GPHNQ9NQX3 736 aaPredicted RBP12.74□□□□□ -0.37
NPM1-206ENST00000519955 E2F4Q16254 413 aa12.72□□□□□ -0.37
NPM1-206ENST00000519955 TMC2Q8TDI7 906 aa12.72□□□□□ -0.37
NPM1-206ENST00000519955 KCNV2Q8TDN2 545 aa12.71□□□□□ -0.37
NPM1-206ENST00000519955 PPP1R15BQ5SWA1 713 aa12.68□□□□□ -0.38
NPM1-206ENST00000519955 ARHGEF1Q92888 912 aaKnown RBP12.66□□□□□ -0.38
NPM1-206ENST00000519955 FOXK1P85037 733 aa12.65□□□□□ -0.38
NPM1-206ENST00000519955 C3orf67Q6ZVT6 689 aa12.65□□□□□ -0.38
NPM1-206ENST00000519955 C2orf72A6NCS6 295 aa12.64□□□□□ -0.39
NPM1-206ENST00000519955 KIF3CO14782 793 aa12.64□□□□□ -0.39
NPM1-206ENST00000519955 CAMK2BQ13554 666 aa12.64□□□□□ -0.39
NPM1-206ENST00000519955 DSG2Q14126 1118 aa12.63□□□□□ -0.39
NPM1-206ENST00000519955 TMEM92Q6UXU6 159 aa12.59□□□□□ -0.39
NPM1-206ENST00000519955 CDAN1Q8IWY9 1227 aa12.59□□□□□ -0.39
NPM1-206ENST00000519955 ARIH1Q9Y4X5 557 aaPredicted RBP12.59□□□□□ -0.39
NPM1-206ENST00000519955 PLPP6Q8IY26 295 aa12.58□□□□□ -0.4
NPM1-206ENST00000519955 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.58□□□□□ -0.4
NPM1-206ENST00000519955 ST18O60284 1047 aa12.51□□□□□ -0.41
NPM1-206ENST00000519955 EMILIN3Q9NT22 766 aa12.51□□□□□ -0.41
NPM1-206ENST00000519955 SLAIN1Q8ND83 568 aa12.49□□□□□ -0.41
NPM1-206ENST00000519955 TULP1O00294 542 aaPredicted RBP12.45□□□□□ -0.42
NPM1-206ENST00000519955 DPYSL4O14531 572 aa12.45□□□□□ -0.42
NPM1-206ENST00000519955 SPDYE16A6NNV3 312 aaPredicted RBP12.44□□□□□ -0.42
NPM1-206ENST00000519955 SEMA3EO15041 775 aa12.44□□□□□ -0.42
NPM1-206ENST00000519955 TESPA1A2RU30 521 aaPredicted RBP12.42□□□□□ -0.42
NPM1-206ENST00000519955 MAP3K9P80192 1104 aa12.42□□□□□ -0.42
NPM1-206ENST00000519955 PDIA6Q15084 440 aa12.42□□□□□ -0.42
NPM1-206ENST00000519955 OXER1Q8TDS5 423 aa12.42□□□□□ -0.42
NPM1-206ENST00000519955 SLC34A2O95436 690 aa12.41□□□□□ -0.42
NPM1-206ENST00000519955 UPF1Q92900 1129 aaKnown RBP eCLIP12.4□□□□□ -0.42
NPM1-206ENST00000519955 SMYD5Q6GMV2 418 aa12.39□□□□□ -0.43
NPM1-206ENST00000519955 PTCD2Q8WV60 388 aaKnown RBP12.39□□□□□ -0.43
NPM1-206ENST00000519955 TBC1D12O60347 775 aa12.38□□□□□ -0.43
NPM1-206ENST00000519955 TPRNQ4KMQ1 711 aa12.37□□□□□ -0.43
NPM1-206ENST00000519955 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.37□□□□□ -0.43
NPM1-206ENST00000519955 LMOD2Q6P5Q4 547 aa12.34□□□□□ -0.43
NPM1-206ENST00000519955 ZNF316A6NFI3 1004 aaPredicted RBP12.33□□□□□ -0.44
NPM1-206ENST00000519955 MMRN1Q13201 1228 aa12.32□□□□□ -0.44
NPM1-206ENST00000519955 DOK7Q18PE1 504 aa12.31□□□□□ -0.44
NPM1-206ENST00000519955 SPNS2Q8IVW8 549 aa12.31□□□□□ -0.44
NPM1-206ENST00000519955 EVI5O60447 810 aa12.3□□□□□ -0.44
NPM1-206ENST00000519955 PRKCSHP14314 528 aaPredicted RBP12.3□□□□□ -0.44
NPM1-206ENST00000519955 MLLT3P42568 568 aaPredicted RBP12.3□□□□□ -0.44
NPM1-206ENST00000519955 PCDHGA4Q9Y5G9 962 aa12.29□□□□□ -0.44
NPM1-206ENST00000519955 PTGER2P43116 358 aa12.28□□□□□ -0.44
NPM1-206ENST00000519955 RIMBP2O15034 1052 aa12.27□□□□□ -0.45
NPM1-206ENST00000519955 MARVELD3Q96A59 401 aa12.27□□□□□ -0.45
NPM1-206ENST00000519955 HOXB3P14651 431 aaPredicted RBP12.25□□□□□ -0.45
NPM1-206ENST00000519955 ANO8Q9HCE9 1232 aaPredicted RBP12.25□□□□□ -0.45
NPM1-206ENST00000519955 ZSWIM6Q9HCJ5 1215 aa12.25□□□□□ -0.45
NPM1-206ENST00000519955 SNPHO15079 494 aa12.24□□□□□ -0.45
NPM1-206ENST00000519955 GRXCR2A6NFK2 248 aa12.22□□□□□ -0.45
NPM1-206ENST00000519955 ZNF710Q8N1W2 664 aa12.21□□□□□ -0.45
NPM1-206ENST00000519955 DDX12PQ92771 950 aa12.2□□□□□ -0.46
NPM1-206ENST00000519955 RBM26Q5T8P6 1007 aaKnown RBP12.19□□□□□ -0.46
NPM1-206ENST00000519955 KDM4FA0A1W2PPD8 638 aa12.18□□□□□ -0.46
NPM1-206ENST00000519955 ARSIQ5FYB1 569 aa12.17□□□□□ -0.46
NPM1-206ENST00000519955 OSBPP22059 807 aa12.16□□□□□ -0.46
NPM1-206ENST00000519955 GPR153Q6NV75 609 aa12.16□□□□□ -0.46
NPM1-206ENST00000519955 GPIHBP1Q8IV16 184 aa12.16□□□□□ -0.46
NPM1-206ENST00000519955 ZC3H15Q8WU90 426 aaKnown RBP12.16□□□□□ -0.46
NPM1-206ENST00000519955 POTEB3A0JP26 581 aa12.15□□□□□ -0.46
NPM1-206ENST00000519955 PHF14O94880 888 aa12.15□□□□□ -0.46
NPM1-206ENST00000519955 POTEBQ6S5H4 581 aa12.15□□□□□ -0.46
NPM1-206ENST00000519955 EPAS1Q99814 870 aa12.15□□□□□ -0.46
NPM1-206ENST00000519955 NUDT7P0C024 238 aa12.14□□□□□ -0.47
NPM1-206ENST00000519955 KHSRPQ92945 711 aaKnown RBP eCLIP12.12□□□□□ -0.471e-6■□□□□ 10.6
NPM1-206ENST00000519955 JPH4Q96JJ6 628 aa12.12□□□□□ -0.47
NPM1-206ENST00000519955 KRTAP3-3Q9BYR6 98 aa12.1□□□□□ -0.47
NPM1-206ENST00000519955 KRTAP3-2Q9BYR7 98 aa12.1□□□□□ -0.47
NPM1-206ENST00000519955 PCDHGA10Q9Y5H3 936 aa12.1□□□□□ -0.47
NPM1-206ENST00000519955 HOXB1P14653 301 aaPredicted RBP12.09□□□□□ -0.47
NPM1-206ENST00000519955 TYW1BQ6NUM6 668 aa12.09□□□□□ -0.47
NPM1-206ENST00000519955 FBXW7Q969H0 707 aa12.09□□□□□ -0.47
NPM1-206ENST00000519955 NUTM2FA1L443 756 aa12.08□□□□□ -0.48
NPM1-206ENST00000519955 ZMYND10O75800 440 aa12.08□□□□□ -0.48
NPM1-206ENST00000519955 FOSBP53539 338 aa12.08□□□□□ -0.48
NPM1-206ENST00000519955 EMP3P54852 163 aa12.08□□□□□ -0.48
NPM1-206ENST00000519955 EN1Q05925 392 aaPredicted RBP12.07□□□□□ -0.48
NPM1-206ENST00000519955 PRIM1P49642 420 aaKnown RBP12.06□□□□□ -0.48
NPM1-206ENST00000519955 ZNF454Q8N9F8 522 aa12.06□□□□□ -0.48
NPM1-206ENST00000519955 PSDA5PKW4 1024 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms