RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 PREX2Q70Z35 1606 aa27.55■■■□□ 2
TRAM1-202ENST00000518678 GPATCH8Q9UKJ3 1502 aaKnown RBP27.54■■■□□ 2
TRAM1-202ENST00000518678 CDC42BPBQ9Y5S2 1711 aa27.52■■■□□ 2
TRAM1-202ENST00000518678 ITSN2Q9NZM3 1697 aa27.51■■□□□ 1.99
TRAM1-202ENST00000518678 PPARGC1BQ86YN6 1023 aaKnown RBP27.5■■□□□ 1.99
TRAM1-202ENST00000518678 FRMPD1Q5SYB0 1578 aa27.49■■□□□ 1.99
TRAM1-202ENST00000518678 ARHGAP5Q13017 1502 aa27.48■■□□□ 1.99
TRAM1-202ENST00000518678 FANCAO15360 1455 aa27.48■■□□□ 1.99
TRAM1-202ENST00000518678 CFAP74Q9C0B2 1584 aa27.48■■□□□ 1.99
TRAM1-202ENST00000518678 NEO1Q92859 1461 aa27.47■■□□□ 1.99
TRAM1-202ENST00000518678 PHLDB1Q86UU1 1377 aa27.46■■□□□ 1.99
TRAM1-202ENST00000518678 RAPGEF3O95398 923 aa27.45■■□□□ 1.98
TRAM1-202ENST00000518678 EFCAB2Q5VUJ9 269 aa27.45■■□□□ 1.98
TRAM1-202ENST00000518678 MYOM3Q5VTT5 1437 aa27.44■■□□□ 1.98
TRAM1-202ENST00000518678 CFDP1Q9UEE9 299 aaPredicted RBP27.43■■□□□ 1.98
TRAM1-202ENST00000518678 AKNAQ7Z591 1439 aa27.41■■□□□ 1.98
TRAM1-202ENST00000518678 MIA2Q96PC5 1412 aa27.38■■□□□ 1.97
TRAM1-202ENST00000518678 RICTORQ6R327 1708 aa27.37■■□□□ 1.97
TRAM1-202ENST00000518678 SAMD9LQ8IVG5 1584 aa27.37■■□□□ 1.97
TRAM1-202ENST00000518678 ZNF777Q9ULD5 760 aaPredicted RBP27.34■■□□□ 1.97
TRAM1-202ENST00000518678 FGD6Q6ZV73 1430 aa27.33■■□□□ 1.97
TRAM1-202ENST00000518678 ABCC1P33527 1531 aa27.32■■□□□ 1.96
TRAM1-202ENST00000518678 CAMSAP2Q08AD1 1489 aa27.31■■□□□ 1.96
TRAM1-202ENST00000518678 PLEKHH2Q8IVE3 1493 aa27.31■■□□□ 1.96
TRAM1-202ENST00000518678 ZNF644Q9H582 1327 aaPredicted RBP27.3■■□□□ 1.96
TRAM1-202ENST00000518678 SCAPERQ9BY12 1400 aa27.3■■□□□ 1.96
TRAM1-202ENST00000518678 PTPN23Q9H3S7 1636 aa27.29■■□□□ 1.96
TRAM1-202ENST00000518678 KIAA1107Q9UPP5 1409 aa27.28■■□□□ 1.96
TRAM1-202ENST00000518678 TCOF1Q13428 1488 aaKnown RBP27.27■■□□□ 1.96
TRAM1-202ENST00000518678 SIGLEC1Q9BZZ2 1709 aa27.27■■□□□ 1.96
TRAM1-202ENST00000518678 ARHGEF12Q9NZN5 1544 aa27.26■■□□□ 1.96
TRAM1-202ENST00000518678 DENND4BO75064 1496 aaPredicted RBP27.26■■□□□ 1.95
TRAM1-202ENST00000518678 SYCP2Q9BX26 1530 aa27.26■■□□□ 1.95
TRAM1-202ENST00000518678 ARHGEF40Q8TER5 1519 aa27.24■■□□□ 1.95
TRAM1-202ENST00000518678 POGZQ7Z3K3 1410 aa27.23■■□□□ 1.95
TRAM1-202ENST00000518678 ADAMTSL3P82987 1691 aa27.21■■□□□ 1.95
TRAM1-202ENST00000518678 MBD5Q9P267 1494 aa27.21■■□□□ 1.95
TRAM1-202ENST00000518678 HNRNPMP52272 730 aaKnown RBP eCLIP27.21■■□□□ 1.95
TRAM1-202ENST00000518678 RRBP1Q9P2E9 1410 aaKnown RBP27.2■■□□□ 1.94
TRAM1-202ENST00000518678 TRAPPC8Q9Y2L5 1435 aa27.2■■□□□ 1.94
TRAM1-202ENST00000518678 BCORL1Q5H9F3 1711 aa27.19■■□□□ 1.94
TRAM1-202ENST00000518678 ZNF518AQ6AHZ1 1483 aa27.19■■□□□ 1.94
TRAM1-202ENST00000518678 ARHGEF5Q12774 1597 aa27.18■■□□□ 1.94
TRAM1-202ENST00000518678 YEATS2Q9ULM3 1422 aa27.18■■□□□ 1.94
TRAM1-202ENST00000518678 ZMYM4Q5VZL5 1548 aa27.17■■□□□ 1.94
TRAM1-202ENST00000518678 HECW2Q9P2P5 1572 aa27.17■■□□□ 1.94
TRAM1-202ENST00000518678 KDM5CP41229 1560 aa27.16■■□□□ 1.94
TRAM1-202ENST00000518678 MADDQ8WXG6 1647 aa27.16■■□□□ 1.94
TRAM1-202ENST00000518678 FAM50AQ14320 339 aaKnown RBP27.15■■□□□ 1.94
TRAM1-202ENST00000518678 RSPH4AQ5TD94 716 aa27.15■■□□□ 1.94
TRAM1-202ENST00000518678 CCDC141Q6ZP82 1450 aa27.14■■□□□ 1.94
TRAM1-202ENST00000518678 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.14■■□□□ 1.941e-6■□□□□ 9.9
TRAM1-202ENST00000518678 AFAP1Q8N556 730 aa27.14■■□□□ 1.94
TRAM1-202ENST00000518678 ZFYVE16Q7Z3T8 1539 aa27.13■■□□□ 1.93
TRAM1-202ENST00000518678 DNMT1P26358 1616 aaKnown RBP27.11■■□□□ 1.93
TRAM1-202ENST00000518678 ARID4BQ4LE39 1312 aaPredicted RBP27.1■■□□□ 1.93
TRAM1-202ENST00000518678 ABCC5O15440 1437 aa27.07■■□□□ 1.92
TRAM1-202ENST00000518678 DAPK1P53355 1430 aa27.07■■□□□ 1.92
TRAM1-202ENST00000518678 PTPRMP28827 1452 aa27.07■■□□□ 1.92
TRAM1-202ENST00000518678 RIMS1Q86UR5 1692 aaKnown RBP27.07■■□□□ 1.92
TRAM1-202ENST00000518678 MAGI2Q86UL8 1455 aa27.06■■□□□ 1.92
TRAM1-202ENST00000518678 MLH3Q9UHC1 1453 aa27.06■■□□□ 1.92
TRAM1-202ENST00000518678 CROCC2H7BZ55 1655 aa27.06■■□□□ 1.92
TRAM1-202ENST00000518678 SPAG9O60271 1321 aaKnown RBP27.05■■□□□ 1.92
TRAM1-202ENST00000518678 INO80Q9ULG1 1556 aaPredicted RBP27.05■■□□□ 1.92
TRAM1-202ENST00000518678 MAST1Q9Y2H9 1570 aa27.04■■□□□ 1.92
TRAM1-202ENST00000518678 TSPY4P0CV99 314 aa27.03■■□□□ 1.92
TRAM1-202ENST00000518678 TSPY10P0CW01 314 aa27.03■■□□□ 1.92
TRAM1-202ENST00000518678 SHANK2Q9UPX8 1470 aa27.03■■□□□ 1.92
TRAM1-202ENST00000518678 KIDINS220Q9ULH0 1771 aa27.02■■□□□ 1.92
TRAM1-202ENST00000518678 RTEL1-TNFRSF6BF6WH68 1400 aa27.02■■□□□ 1.92
TRAM1-202ENST00000518678 ATP7AQ04656 1500 aa27.01■■□□□ 1.91
TRAM1-202ENST00000518678 C9orf84Q5VXU9 1444 aa27■■□□□ 1.91
TRAM1-202ENST00000518678 MYT1LQ9UL68 1186 aa26.98■■□□□ 1.91
TRAM1-202ENST00000518678 MLECQ14165 292 aa26.96■■□□□ 1.91
TRAM1-202ENST00000518678 ABCA6Q8N139 1617 aa26.96■■□□□ 1.91
TRAM1-202ENST00000518678 PTPRKQ15262 1439 aa26.96■■□□□ 1.91
TRAM1-202ENST00000518678 DIP2CQ9Y2E4 1556 aa26.95■■□□□ 1.9
TRAM1-202ENST00000518678 FER1L4A9Z1Z3 1794 aa26.94■■□□□ 1.9
TRAM1-202ENST00000518678 ITGAEP38570 1179 aa26.93■■□□□ 1.9
TRAM1-202ENST00000518678 PLPPR3Q6T4P5 718 aa26.93■■□□□ 1.9
TRAM1-202ENST00000518678 ATP10AO60312 1499 aa26.93■■□□□ 1.9
TRAM1-202ENST00000518678 ADGBQ8N7X0 1667 aa26.92■■□□□ 1.9
TRAM1-202ENST00000518678 ADGRL2O95490 1459 aa26.92■■□□□ 1.9
TRAM1-202ENST00000518678 PLXNC1O60486 1568 aa26.92■■□□□ 1.9
TRAM1-202ENST00000518678 CHIC2Q9UKJ5 165 aa26.91■■□□□ 1.9
TRAM1-202ENST00000518678 REREQ9P2R6 1566 aa26.88■■□□□ 1.89
TRAM1-202ENST00000518678 ANKRD30AQ9BXX3 1397 aa26.87■■□□□ 1.89
TRAM1-202ENST00000518678 NCOA1Q15788 1441 aa26.87■■□□□ 1.89
TRAM1-202ENST00000518678 ROCK1Q13464 1354 aa26.86■■□□□ 1.89
TRAM1-202ENST00000518678 A2MP01023 1474 aa26.84■■□□□ 1.89
TRAM1-202ENST00000518678 KIF15Q9NS87 1388 aa26.84■■□□□ 1.89
TRAM1-202ENST00000518678 LMTK3Q96Q04 1460 aa26.81■■□□□ 1.88
TRAM1-202ENST00000518678 RRP7BPQ9NSQ0 103 aa26.81■■□□□ 1.88
TRAM1-202ENST00000518678 DHX29Q7Z478 1369 aaKnown RBP26.81■■□□□ 1.88
TRAM1-202ENST00000518678 DUOX2Q9NRD8 1548 aa26.8■■□□□ 1.88
TRAM1-202ENST00000518678 AGLP35573 1532 aa26.77■■□□□ 1.88
TRAM1-202ENST00000518678 TRIM26Q12899 539 aaPredicted RBP26.76■■□□□ 1.87
TRAM1-202ENST00000518678 CEBPAP49715 358 aaPredicted RBP26.74■■□□□ 1.87
TRAM1-202ENST00000518678 ERBINQ96RT1 1412 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms