RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 RICTORQ6R327 1708 aa14.98□□□□□ -0.01
PVT1-207ENST00000518528 CEBPAP49715 358 aaPredicted RBP14.98□□□□□ -0.01
PVT1-207ENST00000518528 C9orf84Q5VXU9 1444 aa14.98□□□□□ -0.01
PVT1-207ENST00000518528 UHRF1BP1Q6BDS2 1440 aa14.98□□□□□ -0.01
PVT1-207ENST00000518528 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.97□□□□□ -0.01
PVT1-207ENST00000518528 MYT1LQ9UL68 1186 aa14.97□□□□□ -0.01
PVT1-207ENST00000518528 TTC37Q6PGP7 1564 aa14.97□□□□□ -0.01
PVT1-207ENST00000518528 PLCH2O75038 1416 aa14.96□□□□□ -0.01
PVT1-207ENST00000518528 ESF1Q9H501 851 aaKnown RBP14.96□□□□□ -0.01
PVT1-207ENST00000518528 CDK11AQ9UQ88 783 aaPredicted RBP14.95□□□□□ -0.02
PVT1-207ENST00000518528 HECW1Q76N89 1606 aa14.95□□□□□ -0.02
PVT1-207ENST00000518528 ARHGEF12Q9NZN5 1544 aa14.94□□□□□ -0.02
PVT1-207ENST00000518528 PTPRTO14522 1441 aa14.92□□□□□ -0.02
PVT1-207ENST00000518528 ATP1B4Q9UN42 357 aaPredicted RBP14.92□□□□□ -0.02
PVT1-207ENST00000518528 FER1L4A9Z1Z3 1794 aa14.91□□□□□ -0.02
PVT1-207ENST00000518528 EEA1Q15075 1411 aa14.9□□□□□ -0.02
PVT1-207ENST00000518528 PREX1Q8TCU6 1659 aa14.89□□□□□ -0.03
PVT1-207ENST00000518528 ZNF518AQ6AHZ1 1483 aa14.89□□□□□ -0.03
PVT1-207ENST00000518528 SPATA31D1Q6ZQQ2 1576 aa14.88□□□□□ -0.03
PVT1-207ENST00000518528 AFAP1Q8N556 730 aa14.87□□□□□ -0.03
PVT1-207ENST00000518528 TRAPPC8Q9Y2L5 1435 aa14.85□□□□□ -0.03
PVT1-207ENST00000518528 IQSEC2Q5JU85 1478 aa14.85□□□□□ -0.03
PVT1-207ENST00000518528 SIGLEC1Q9BZZ2 1709 aa14.85□□□□□ -0.03
PVT1-207ENST00000518528 CDK13Q14004 1512 aaKnown RBP14.85□□□□□ -0.03
PVT1-207ENST00000518528 SETD1BQ9UPS6 1966 aaKnown RBP14.83□□□□□ -0.04
PVT1-207ENST00000518528 CLIP1P30622 1438 aa14.82□□□□□ -0.04
PVT1-207ENST00000518528 FMN1Q68DA7 1419 aa14.82□□□□□ -0.04
PVT1-207ENST00000518528 CNTLNQ9NXG0 1405 aa14.82□□□□□ -0.04
PVT1-207ENST00000518528 UBAP1LF5GYI3 381 aa14.81□□□□□ -0.04
PVT1-207ENST00000518528 ARHGAP5Q13017 1502 aa14.8□□□□□ -0.04
PVT1-207ENST00000518528 STRCQ7RTU9 1775 aa14.8□□□□□ -0.04
PVT1-207ENST00000518528 NCOA1Q15788 1441 aa14.79□□□□□ -0.04
PVT1-207ENST00000518528 TROQ12816 1431 aaPredicted RBP14.78□□□□□ -0.04
PVT1-207ENST00000518528 UBTFP17480 764 aaKnown RBP14.78□□□□□ -0.04
PVT1-207ENST00000518528 MLH3Q9UHC1 1453 aa14.77□□□□□ -0.04
PVT1-207ENST00000518528 LTBP4Q8N2S1 1624 aa14.77□□□□□ -0.05
PVT1-207ENST00000518528 KDM5CP41229 1560 aa14.77□□□□□ -0.05
PVT1-207ENST00000518528 PKD2Q13563 968 aa14.76□□□□□ -0.05
PVT1-207ENST00000518528 REREQ9P2R6 1566 aa14.76□□□□□ -0.05
PVT1-207ENST00000518528 AGLP35573 1532 aa14.76□□□□□ -0.05
PVT1-207ENST00000518528 KIF14Q15058 1648 aa14.75□□□□□ -0.05
PVT1-207ENST00000518528 NPATQ14207 1427 aa14.75□□□□□ -0.05
PVT1-207ENST00000518528 DIP2CQ9Y2E4 1556 aa14.74□□□□□ -0.05
PVT1-207ENST00000518528 MYO5CQ9NQX4 1742 aa14.74□□□□□ -0.05
PVT1-207ENST00000518528 NCKAP5LQ9HCH0 1330 aa14.73□□□□□ -0.05
PVT1-207ENST00000518528 ZNF335Q9H4Z2 1342 aaPredicted RBP14.72□□□□□ -0.05
PVT1-207ENST00000518528 ZMYM3Q14202 1370 aa14.71□□□□□ -0.06
PVT1-207ENST00000518528 C3P01024 1663 aa14.69□□□□□ -0.06
PVT1-207ENST00000518528 CAMSAP1Q5T5Y3 1602 aa14.69□□□□□ -0.06
PVT1-207ENST00000518528 SCAF1Q9H7N4 1312 aaKnown RBP14.68□□□□□ -0.06
PVT1-207ENST00000518528 EHMT2Q96KQ7 1210 aa14.68□□□□□ -0.06
PVT1-207ENST00000518528 PPP6R1Q9UPN7 881 aa14.68□□□□□ -0.06
PVT1-207ENST00000518528 SPAG9O60271 1321 aaKnown RBP14.67□□□□□ -0.06
PVT1-207ENST00000518528 ABCA6Q8N139 1617 aa14.66□□□□□ -0.06
PVT1-207ENST00000518528 TOM1O60784 492 aa14.66□□□□□ -0.06
PVT1-207ENST00000518528 ZNF777Q9ULD5 760 aaPredicted RBP14.66□□□□□ -0.06
PVT1-207ENST00000518528 PLA2R1Q13018 1463 aa14.65□□□□□ -0.06
PVT1-207ENST00000518528 ARHGAP35Q9NRY4 1499 aa14.65□□□□□ -0.06
PVT1-207ENST00000518528 PIP4K2BP78356 416 aa14.64□□□□□ -0.07
PVT1-207ENST00000518528 ABCC1P33527 1531 aa14.64□□□□□ -0.07
PVT1-207ENST00000518528 HSPA1LP34931 641 aa14.63□□□□□ -0.07
PVT1-207ENST00000518528 PHF23Q9BUL5 403 aaPredicted RBP14.63□□□□□ -0.07
PVT1-207ENST00000518528 GGT6Q6P531 493 aa14.62□□□□□ -0.07
PVT1-207ENST00000518528 CCDC18Q5T9S5 1454 aa14.61□□□□□ -0.07
PVT1-207ENST00000518528 HNRNPMP52272 730 aaKnown RBP eCLIP14.6□□□□□ -0.076e-7■■■□□ 17.4
PVT1-207ENST00000518528 TCOF1Q13428 1488 aaKnown RBP14.6□□□□□ -0.07
PVT1-207ENST00000518528 PTPRKQ15262 1439 aa14.59□□□□□ -0.07
PVT1-207ENST00000518528 CFDP1Q9UEE9 299 aaPredicted RBP14.58□□□□□ -0.08
PVT1-207ENST00000518528 PREX2Q70Z35 1606 aa14.58□□□□□ -0.08
PVT1-207ENST00000518528 MROH2AA6NES4 1674 aa14.58□□□□□ -0.08
PVT1-207ENST00000518528 CASKIN1Q8WXD9 1431 aa14.58□□□□□ -0.08
PVT1-207ENST00000518528 A2MP01023 1474 aa14.57□□□□□ -0.08
PVT1-207ENST00000518528 PLEKHH2Q8IVE3 1493 aa14.57□□□□□ -0.08
PVT1-207ENST00000518528 SAMD9LQ8IVG5 1584 aa14.56□□□□□ -0.08
PVT1-207ENST00000518528 KIDINS220Q9ULH0 1771 aa14.56□□□□□ -0.08
PVT1-207ENST00000518528 KIAA1107Q9UPP5 1409 aa14.56□□□□□ -0.08
PVT1-207ENST00000518528 CEP170BQ9Y4F5 1589 aaPredicted RBP14.56□□□□□ -0.08
PVT1-207ENST00000518528 ITSN2Q9NZM3 1697 aa14.55□□□□□ -0.08
PVT1-207ENST00000518528 CDC42BPBQ9Y5S2 1711 aa14.55□□□□□ -0.08
PVT1-207ENST00000518528 ANKLE2Q86XL3 938 aa14.54□□□□□ -0.08
PVT1-207ENST00000518528 A2ML1A8K2U0 1454 aa14.54□□□□□ -0.08
PVT1-207ENST00000518528 CPS1P31327 1500 aa14.54□□□□□ -0.08
PVT1-207ENST00000518528 MED1Q15648 1581 aaPredicted RBP14.53□□□□□ -0.08
PVT1-207ENST00000518528 ATP7AQ04656 1500 aa14.52□□□□□ -0.08
PVT1-207ENST00000518528 SYCP2Q9BX26 1530 aa14.52□□□□□ -0.08
PVT1-207ENST00000518528 CCNB3Q8WWL7 1395 aa14.52□□□□□ -0.08
PVT1-207ENST00000518528 THEMISQ8N1K5 641 aaPredicted RBP14.52□□□□□ -0.09
PVT1-207ENST00000518528 MYO3AQ8NEV4 1616 aa14.52□□□□□ -0.09
PVT1-207ENST00000518528 GPATCH8Q9UKJ3 1502 aaKnown RBP14.51□□□□□ -0.09
PVT1-207ENST00000518528 SHANK2Q9UPX8 1470 aa14.51□□□□□ -0.09
PVT1-207ENST00000518528 TNRQ92752 1358 aa14.51□□□□□ -0.09
PVT1-207ENST00000518528 ZNF142P52746 1687 aaPredicted RBP14.51□□□□□ -0.09
PVT1-207ENST00000518528 CLTCQ00610 1675 aaKnown RBP14.48□□□□□ -0.09
PVT1-207ENST00000518528 PLXNC1O60486 1568 aa14.47□□□□□ -0.09
PVT1-207ENST00000518528 SUPT6HQ7KZ85 1726 aaKnown RBP14.47□□□□□ -0.09
PVT1-207ENST00000518528 FYCO1Q9BQS8 1478 aa14.47□□□□□ -0.09
PVT1-207ENST00000518528 KIF3BO15066 747 aa14.46□□□□□ -0.09
PVT1-207ENST00000518528 FBXO31Q5XUX0 539 aaPredicted RBP14.46□□□□□ -0.09
PVT1-207ENST00000518528 DHX29Q7Z478 1369 aaKnown RBP14.46□□□□□ -0.1
PVT1-207ENST00000518528 WASHC2CQ9Y4E1 1318 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms