RNA–Protein interactions for RNA: ENST00000518506.4

TVP23C-CDRT4-202, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 5

Gene TVP23C-CDRT4, Length 520 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-202ENST00000518506 UPF1Q92900 1129 aaKnown RBP eCLIP4.44□□□□□ -1.7
TVP23C-CDRT4-202ENST00000518506 EMILIN3Q9NT22 766 aa4.44□□□□□ -1.7
TVP23C-CDRT4-202ENST00000518506 RYDENQ9NUL5 291 aaKnown RBP4.44□□□□□ -1.7
TVP23C-CDRT4-202ENST00000518506 C7P10643 843 aa4.43□□□□□ -1.7
TVP23C-CDRT4-202ENST00000518506 PPP1R15BQ5SWA1 713 aa4.43□□□□□ -1.7
TVP23C-CDRT4-202ENST00000518506 IER5LQ5T953 404 aa4.43□□□□□ -1.7
TVP23C-CDRT4-202ENST00000518506 DDX27Q96GQ7 796 aaKnown RBP4.43□□□□□ -1.7
TVP23C-CDRT4-202ENST00000518506 SEMA3EO15041 775 aa4.42□□□□□ -1.7
TVP23C-CDRT4-202ENST00000518506 PLPP6Q8IY26 295 aa4.42□□□□□ -1.7
TVP23C-CDRT4-202ENST00000518506 KHSRPQ92945 711 aaKnown RBP eCLIP4.42□□□□□ -1.75e-10■■■□□ 16.2
TVP23C-CDRT4-202ENST00000518506 TMEM121BQ9BXQ6 578 aaPredicted RBP4.42□□□□□ -1.7
TVP23C-CDRT4-202ENST00000518506 G3V3G9 751 aa4.41□□□□□ -1.7
TVP23C-CDRT4-202ENST00000518506 DPYSL4O14531 572 aa4.41□□□□□ -1.7
TVP23C-CDRT4-202ENST00000518506 KIF3CO14782 793 aa4.41□□□□□ -1.7
TVP23C-CDRT4-202ENST00000518506 PDE4AP27815 886 aa4.41□□□□□ -1.7
TVP23C-CDRT4-202ENST00000518506 CLCN6P51797 869 aa4.41□□□□□ -1.7
TVP23C-CDRT4-202ENST00000518506 E2F4Q16254 413 aa4.41□□□□□ -1.7
TVP23C-CDRT4-202ENST00000518506 TPRNQ4KMQ1 711 aa4.41□□□□□ -1.7
TVP23C-CDRT4-202ENST00000518506 GPHNQ9NQX3 736 aaPredicted RBP4.41□□□□□ -1.7
TVP23C-CDRT4-202ENST00000518506 MLLT3P42568 568 aaPredicted RBP4.4□□□□□ -1.71
TVP23C-CDRT4-202ENST00000518506 MFSD10Q14728 455 aa4.4□□□□□ -1.71
TVP23C-CDRT4-202ENST00000518506 TMC2Q8TDI7 906 aa4.4□□□□□ -1.71
TVP23C-CDRT4-202ENST00000518506 BCANQ96GW7 911 aa4.4□□□□□ -1.71
TVP23C-CDRT4-202ENST00000518506 NBR1Q14596 966 aa4.39□□□□□ -1.71
TVP23C-CDRT4-202ENST00000518506 C3orf67Q6ZVT6 689 aa4.39□□□□□ -1.71
TVP23C-CDRT4-202ENST00000518506 L3MBTL3Q96JM7 780 aaPredicted RBP4.39□□□□□ -1.71
TVP23C-CDRT4-202ENST00000518506 FOXK1P85037 733 aa4.37□□□□□ -1.71
TVP23C-CDRT4-202ENST00000518506 SLAIN1Q8ND83 568 aa4.37□□□□□ -1.71
TVP23C-CDRT4-202ENST00000518506 OTUD5Q96G74 571 aa4.37□□□□□ -1.71
TVP23C-CDRT4-202ENST00000518506 PRIM1P49642 420 aaKnown RBP4.36□□□□□ -1.71
TVP23C-CDRT4-202ENST00000518506 RBM26Q5T8P6 1007 aaKnown RBP4.36□□□□□ -1.71
TVP23C-CDRT4-202ENST00000518506 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.36□□□□□ -1.71
TVP23C-CDRT4-202ENST00000518506 GRXCR2A6NFK2 248 aa4.35□□□□□ -1.71
TVP23C-CDRT4-202ENST00000518506 CAMK2BQ13554 666 aa4.35□□□□□ -1.71
TVP23C-CDRT4-202ENST00000518506 DDX12PQ92771 950 aa4.35□□□□□ -1.71
TVP23C-CDRT4-202ENST00000518506 HOXB3P14651 431 aaPredicted RBP4.33□□□□□ -1.72
TVP23C-CDRT4-202ENST00000518506 MAP3K9P80192 1104 aa4.33□□□□□ -1.72
TVP23C-CDRT4-202ENST00000518506 ARSIQ5FYB1 569 aa4.33□□□□□ -1.72
TVP23C-CDRT4-202ENST00000518506 TESPA1A2RU30 521 aaPredicted RBP4.32□□□□□ -1.72
TVP23C-CDRT4-202ENST00000518506 NUDT7P0C024 238 aa4.32□□□□□ -1.72
TVP23C-CDRT4-202ENST00000518506 LHX8Q68G74 356 aa4.32□□□□□ -1.72
TVP23C-CDRT4-202ENST00000518506 LMOD2Q6P5Q4 547 aa4.32□□□□□ -1.72
TVP23C-CDRT4-202ENST00000518506 P3H3Q8IVL6 736 aa4.32□□□□□ -1.72
TVP23C-CDRT4-202ENST00000518506 OXER1Q8TDS5 423 aa4.32□□□□□ -1.72
TVP23C-CDRT4-202ENST00000518506 ARHGEF1Q92888 912 aaKnown RBP4.32□□□□□ -1.72
TVP23C-CDRT4-202ENST00000518506 EVI5O60447 810 aa4.31□□□□□ -1.72
TVP23C-CDRT4-202ENST00000518506 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.31□□□□□ -1.72
TVP23C-CDRT4-202ENST00000518506 PCDHGA4Q9Y5G9 962 aa4.31□□□□□ -1.72
TVP23C-CDRT4-202ENST00000518506 RBM33Q96EV2 1170 aaKnown RBP4.3□□□□□ -1.72
TVP23C-CDRT4-202ENST00000518506 CDHR5Q9HBB8 845 aa4.3□□□□□ -1.72
TVP23C-CDRT4-202ENST00000518506 SCUBE2Q9NQ36 999 aa4.29□□□□□ -1.72
TVP23C-CDRT4-202ENST00000518506 FECHP22830 423 aa4.28□□□□□ -1.72
TVP23C-CDRT4-202ENST00000518506 PDIA6Q15084 440 aa4.28□□□□□ -1.72
TVP23C-CDRT4-202ENST00000518506 TSR1Q2NL82 804 aaKnown RBP4.28□□□□□ -1.72
TVP23C-CDRT4-202ENST00000518506 ZC3H15Q8WU90 426 aaKnown RBP4.28□□□□□ -1.72
TVP23C-CDRT4-202ENST00000518506 MARVELD3Q96A59 401 aa4.28□□□□□ -1.72
TVP23C-CDRT4-202ENST00000518506 OSBPP22059 807 aa4.27□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 GPR153Q6NV75 609 aa4.27□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 PTCD2Q8WV60 388 aaKnown RBP4.27□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 FAM163AQ96GL9 167 aaPredicted RBP4.27□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 LHX6Q9UPM6 363 aa4.27□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 KDM4FA0A1W2PPD8 638 aa4.26□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 NUTM2FA1L443 756 aa4.26□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 FAM161AQ3B820 660 aa4.26□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 SLC24A3Q9HC58 644 aa4.26□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 POTEB3A0JP26 581 aa4.25□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 POTEBQ6S5H4 581 aa4.25□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 NLRP7Q8WX94 980 aa4.25□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 ARIH1Q9Y4X5 557 aaPredicted RBP4.25□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 PCDHGA10Q9Y5H3 936 aa4.25□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 GPR37O15354 613 aa4.24□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 ST18O60284 1047 aa4.24□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 TBC1D12O60347 775 aa4.24□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 LCE2DQ5TA82 110 aaPredicted RBP4.24□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 ZNF710Q8N1W2 664 aa4.24□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 ZNF454Q8N9F8 522 aa4.24□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 ADAM33Q9BZ11 813 aa4.24□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 AXIN2Q9Y2T1 843 aa4.24□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 C3orf80F5H4A9 247 aa4.23□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 SLC34A2O95436 690 aa4.23□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 GPIHBP1Q8IV16 184 aa4.23□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 SPDYE16A6NNV3 312 aaPredicted RBP4.22□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 COL9A1P20849 921 aa4.22□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 DOK7Q18PE1 504 aa4.22□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 POTEEQ6S8J3 1075 aa4.22□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 MAMSTRQ6ZN01 415 aa4.22□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 ANO8Q9HCE9 1232 aaPredicted RBP4.22□□□□□ -1.73
TVP23C-CDRT4-202ENST00000518506 FAM205CA6NFA0 338 aa4.21□□□□□ -1.74
TVP23C-CDRT4-202ENST00000518506 MAP3K7O43318 606 aa4.21□□□□□ -1.74
TVP23C-CDRT4-202ENST00000518506 PSEN2P49810 448 aa4.21□□□□□ -1.74
TVP23C-CDRT4-202ENST00000518506 NPDC1Q9NQX5 325 aaPredicted RBP4.21□□□□□ -1.74
TVP23C-CDRT4-202ENST00000518506 FOSBP53539 338 aa4.2□□□□□ -1.74
TVP23C-CDRT4-202ENST00000518506 VARS2Q5ST30 1063 aaKnown RBP4.2□□□□□ -1.74
TVP23C-CDRT4-202ENST00000518506 FAM198AQ9UFP1 575 aa4.2□□□□□ -1.74
TVP23C-CDRT4-202ENST00000518506 ZNF316A6NFI3 1004 aaPredicted RBP4.19□□□□□ -1.74
TVP23C-CDRT4-202ENST00000518506 SMAPO00193 183 aa4.19□□□□□ -1.74
TVP23C-CDRT4-202ENST00000518506 ZMYND10O75800 440 aa4.19□□□□□ -1.74
TVP23C-CDRT4-202ENST00000518506 HOXB1P14653 301 aaPredicted RBP4.19□□□□□ -1.74
TVP23C-CDRT4-202ENST00000518506 PTGER2P43116 358 aa4.19□□□□□ -1.74
TVP23C-CDRT4-202ENST00000518506 EN1Q05925 392 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms