RNA–Protein interactions for RNA: ENST00000518506.4

TVP23C-CDRT4-202, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 5

Gene TVP23C-CDRT4, Length 520 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-202ENST00000518506 AEBP2Q6ZN18 517 aaPredicted RBP9.42□□□□□ -0.9
TVP23C-CDRT4-202ENST00000518506 CHIC1Q5VXU3 224 aa9.13□□□□□ -0.95
TVP23C-CDRT4-202ENST00000518506 PHF23Q9BUL5 403 aaPredicted RBP8.16□□□□□ -1.1
TVP23C-CDRT4-202ENST00000518506 SENP3Q9H4L4 574 aaPredicted RBP7.76□□□□□ -1.17
TVP23C-CDRT4-202ENST00000518506 PLPPR3Q6T4P5 718 aa7.38□□□□□ -1.23
TVP23C-CDRT4-202ENST00000518506 FOXD1Q16676 465 aa7.35□□□□□ -1.23
TVP23C-CDRT4-202ENST00000518506 ADRA2BP18089 450 aa7.22□□□□□ -1.25
TVP23C-CDRT4-202ENST00000518506 PPP6R1Q9UPN7 881 aa7.22□□□□□ -1.25
TVP23C-CDRT4-202ENST00000518506 PIAS4Q8N2W9 510 aaPredicted RBP6.92□□□□□ -1.3
TVP23C-CDRT4-202ENST00000518506 KCNA4P22459 653 aa6.64□□□□□ -1.35
TVP23C-CDRT4-202ENST00000518506 PPP4R3CPQ6ZMV5 832 aa6.61□□□□□ -1.35
TVP23C-CDRT4-202ENST00000518506 MAPK8IP2Q13387 824 aaPredicted RBP6.57□□□□□ -1.36
TVP23C-CDRT4-202ENST00000518506 MSH5O43196 834 aa6.56□□□□□ -1.36
TVP23C-CDRT4-202ENST00000518506 NPM3O75607 178 aaKnown RBP6.39□□□□□ -1.39
TVP23C-CDRT4-202ENST00000518506 SCAF1Q9H7N4 1312 aaKnown RBP6.32□□□□□ -1.4
TVP23C-CDRT4-202ENST00000518506 NCBP3Q53F19 620 aaKnown RBP6.32□□□□□ -1.4
TVP23C-CDRT4-202ENST00000518506 CNKSR2Q8WXI2 1034 aa6.32□□□□□ -1.4
TVP23C-CDRT4-202ENST00000518506 EHMT2Q96KQ7 1210 aa6.31□□□□□ -1.4
TVP23C-CDRT4-202ENST00000518506 SLC4A1APQ9BWU0 796 aaKnown RBP6.25□□□□□ -1.41
TVP23C-CDRT4-202ENST00000518506 DMRT2Q9Y5R5 561 aa6.25□□□□□ -1.41
TVP23C-CDRT4-202ENST00000518506 RNF216Q9NWF9 866 aaPredicted RBP6.16□□□□□ -1.42
TVP23C-CDRT4-202ENST00000518506 ZBTB22O15209 634 aa6.15□□□□□ -1.42
TVP23C-CDRT4-202ENST00000518506 HOXD11P31277 338 aaPredicted RBP6.13□□□□□ -1.43
TVP23C-CDRT4-202ENST00000518506 CSRNP3Q8WYN3 585 aa6.13□□□□□ -1.43
TVP23C-CDRT4-202ENST00000518506 DCAF8L1A6NGE4 600 aa6.12□□□□□ -1.43
TVP23C-CDRT4-202ENST00000518506 SLC4A2P04920 1241 aa6.04□□□□□ -1.44
TVP23C-CDRT4-202ENST00000518506 POTEDQ86YR6 584 aa6.03□□□□□ -1.44
TVP23C-CDRT4-202ENST00000518506 FOXD4L1Q9NU39 408 aa5.95□□□□□ -1.46
TVP23C-CDRT4-202ENST00000518506 DNAJC5BQ9UF47 199 aa5.92□□□□□ -1.46
TVP23C-CDRT4-202ENST00000518506 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.91□□□□□ -1.461e-7■□□□□ 8.3
TVP23C-CDRT4-202ENST00000518506 ATF5Q9Y2D1 282 aaPredicted RBP5.86□□□□□ -1.47
TVP23C-CDRT4-202ENST00000518506 U3KPZ7 1027 aaPredicted RBP5.86□□□□□ -1.47
TVP23C-CDRT4-202ENST00000518506 MYCNP04198 464 aaPredicted RBP5.8□□□□□ -1.48
TVP23C-CDRT4-202ENST00000518506 SPINK5Q9NQ38 1064 aaPredicted RBP5.75□□□□□ -1.49
TVP23C-CDRT4-202ENST00000518506 RNF39Q9H2S5 420 aa5.72□□□□□ -1.49
TVP23C-CDRT4-202ENST00000518506 TRHP20396 242 aaPredicted RBP5.68□□□□□ -1.5
TVP23C-CDRT4-202ENST00000518506 CAPN15O75808 1086 aa5.65□□□□□ -1.5
TVP23C-CDRT4-202ENST00000518506 ABCB7O75027 752 aa5.64□□□□□ -1.51
TVP23C-CDRT4-202ENST00000518506 SAMD1Q6SPF0 538 aaPredicted RBP5.62□□□□□ -1.51
TVP23C-CDRT4-202ENST00000518506 ATXN8OSP0DMR3 200 aa5.61□□□□□ -1.51
TVP23C-CDRT4-202ENST00000518506 ZNF219Q9P2Y4 722 aaPredicted RBP5.61□□□□□ -1.51
TVP23C-CDRT4-202ENST00000518506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.58□□□□□ -1.52
TVP23C-CDRT4-202ENST00000518506 HNRNPUL2Q1KMD3 747 aaKnown RBP5.58□□□□□ -1.52
TVP23C-CDRT4-202ENST00000518506 POLA2Q14181 598 aa5.57□□□□□ -1.52
TVP23C-CDRT4-202ENST00000518506 C1QBPQ07021 282 aaKnown RBP5.56□□□□□ -1.52
TVP23C-CDRT4-202ENST00000518506 CACNB1Q02641 598 aaPredicted RBP5.55□□□□□ -1.52
TVP23C-CDRT4-202ENST00000518506 MKRN4PQ13434 485 aaPredicted RBP5.55□□□□□ -1.52
TVP23C-CDRT4-202ENST00000518506 FKBP8Q14318 412 aa5.53□□□□□ -1.52
TVP23C-CDRT4-202ENST00000518506 DSG3P32926 999 aa5.51□□□□□ -1.53
TVP23C-CDRT4-202ENST00000518506 APLP2Q06481 763 aa5.47□□□□□ -1.53
TVP23C-CDRT4-202ENST00000518506 OSCARQ8IYS5 282 aa5.4□□□□□ -1.54
TVP23C-CDRT4-202ENST00000518506 SPDYE4A6NLX3 237 aa5.38□□□□□ -1.55
TVP23C-CDRT4-202ENST00000518506 FBLN2P98095 1184 aa5.37□□□□□ -1.55
TVP23C-CDRT4-202ENST00000518506 ZNF692Q9BU19 519 aaPredicted RBP5.29□□□□□ -1.56
TVP23C-CDRT4-202ENST00000518506 PABPN1Q86U42 306 aaKnown RBP eCLIP5.26□□□□□ -1.57
TVP23C-CDRT4-202ENST00000518506 ZBTB12Q9Y330 459 aaPredicted RBP5.26□□□□□ -1.57
TVP23C-CDRT4-202ENST00000518506 PROM2Q8N271 834 aa5.23□□□□□ -1.57
TVP23C-CDRT4-202ENST00000518506 RTN4Q9NQC3 1192 aaKnown RBP5.22□□□□□ -1.57
TVP23C-CDRT4-202ENST00000518506 SSUH2Q9Y2M2 353 aa5.22□□□□□ -1.57
TVP23C-CDRT4-202ENST00000518506 SPDYE2BA6NHP3 402 aa5.2□□□□□ -1.58
TVP23C-CDRT4-202ENST00000518506 SPDYE6P0CI01 402 aa5.2□□□□□ -1.58
TVP23C-CDRT4-202ENST00000518506 SPDYE2Q495Y8 402 aa5.2□□□□□ -1.58
TVP23C-CDRT4-202ENST00000518506 IFNLR1Q8IU57 520 aaPredicted RBP5.17□□□□□ -1.58
TVP23C-CDRT4-202ENST00000518506 CLEC11AQ9Y240 323 aa5.17□□□□□ -1.58
TVP23C-CDRT4-202ENST00000518506 VASPP50552 380 aaPredicted RBP5.16□□□□□ -1.58
TVP23C-CDRT4-202ENST00000518506 REM2Q8IYK8 340 aaPredicted RBP5.14□□□□□ -1.59
TVP23C-CDRT4-202ENST00000518506 PITPNM1O00562 1244 aa5.11□□□□□ -1.59
TVP23C-CDRT4-202ENST00000518506 CHADLQ6NUI6 762 aa5.11□□□□□ -1.59
TVP23C-CDRT4-202ENST00000518506 MIER1Q8N108 512 aa5.11□□□□□ -1.59
TVP23C-CDRT4-202ENST00000518506 FBXO3Q9UK99 471 aa5.11□□□□□ -1.59
TVP23C-CDRT4-202ENST00000518506 AKT1S1Q96B36 256 aa5.1□□□□□ -1.59
TVP23C-CDRT4-202ENST00000518506 KLHL34Q8N239 644 aa5.09□□□□□ -1.59
TVP23C-CDRT4-202ENST00000518506 PLCD3Q8N3E9 789 aa5.09□□□□□ -1.59
TVP23C-CDRT4-202ENST00000518506 RBM42Q9BTD8 480 aaKnown RBP5.09□□□□□ -1.59
TVP23C-CDRT4-202ENST00000518506 CREBZFQ9NS37 354 aa5.06□□□□□ -1.6
TVP23C-CDRT4-202ENST00000518506 PRR29P0C7W0 189 aa5.05□□□□□ -1.6
TVP23C-CDRT4-202ENST00000518506 SPDYE1Q8NFV5 336 aaPredicted RBP5.05□□□□□ -1.6
TVP23C-CDRT4-202ENST00000518506 AMER1Q5JTC6 1135 aaPredicted RBP5.03□□□□□ -1.6
TVP23C-CDRT4-202ENST00000518506 PKD2Q13563 968 aa5.02□□□□□ -1.61
TVP23C-CDRT4-202ENST00000518506 STAG3Q9UJ98 1225 aa5.02□□□□□ -1.61
TVP23C-CDRT4-202ENST00000518506 MNX1P50219 401 aaPredicted RBP5.01□□□□□ -1.61
TVP23C-CDRT4-202ENST00000518506 CIZ1Q9ULV3 898 aaPredicted RBP5□□□□□ -1.61
TVP23C-CDRT4-202ENST00000518506 DCAF8L2P0C7V8 631 aa4.99□□□□□ -1.61
TVP23C-CDRT4-202ENST00000518506 SPOCK2Q92563 424 aa4.99□□□□□ -1.61
TVP23C-CDRT4-202ENST00000518506 PRKAR2AP13861 404 aaKnown RBP4.98□□□□□ -1.61
TVP23C-CDRT4-202ENST00000518506 RASEFQ8IZ41 740 aa4.98□□□□□ -1.61
TVP23C-CDRT4-202ENST00000518506 NUBP1P53384 320 aa4.97□□□□□ -1.61
TVP23C-CDRT4-202ENST00000518506 CHRDL2Q6WN34 429 aa4.97□□□□□ -1.61
TVP23C-CDRT4-202ENST00000518506 PIP4P2Q8N4L2 257 aa4.96□□□□□ -1.62
TVP23C-CDRT4-202ENST00000518506 RGL2O15211 777 aa4.95□□□□□ -1.62
TVP23C-CDRT4-202ENST00000518506 ECM2O94769 699 aaPredicted RBP4.95□□□□□ -1.62
TVP23C-CDRT4-202ENST00000518506 TSPYL2Q9H2G4 693 aaPredicted RBP4.95□□□□□ -1.62
TVP23C-CDRT4-202ENST00000518506 FXR2P51116 673 aaKnown RBP eCLIP4.94□□□□□ -1.62
TVP23C-CDRT4-202ENST00000518506 DCAF8Q5TAQ9 597 aa4.94□□□□□ -1.62
TVP23C-CDRT4-202ENST00000518506 NPM1P06748 294 aaKnown RBP eCLIP4.92□□□□□ -1.62
TVP23C-CDRT4-202ENST00000518506 PYGBP11216 843 aa4.92□□□□□ -1.62
TVP23C-CDRT4-202ENST00000518506 RNF25Q96BH1 459 aaPredicted RBP4.92□□□□□ -1.62
TVP23C-CDRT4-202ENST00000518506 FARP1Q9Y4F1 1045 aaPredicted RBP4.92□□□□□ -1.62
TVP23C-CDRT4-202ENST00000518506 PLEKHG5O94827 1062 aa4.91□□□□□ -1.62
TVP23C-CDRT4-202ENST00000518506 EVX2Q03828 476 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms