RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 FRMPD1Q5SYB0 1578 aa29.57■■■□□ 2.32
FAM49B-208ENST00000518344 ZNF777Q9ULD5 760 aaPredicted RBP29.52■■■□□ 2.32
FAM49B-208ENST00000518344 RICTORQ6R327 1708 aa29.51■■■□□ 2.31
FAM49B-208ENST00000518344 POGZQ7Z3K3 1410 aa29.5■■■□□ 2.31
FAM49B-208ENST00000518344 CCNB3Q8WWL7 1395 aa29.5■■■□□ 2.31
FAM49B-208ENST00000518344 PREX2Q70Z35 1606 aa29.49■■■□□ 2.31
FAM49B-208ENST00000518344 CDC42BPBQ9Y5S2 1711 aa29.49■■■□□ 2.31
FAM49B-208ENST00000518344 EHBP1L1Q8N3D4 1523 aa29.49■■■□□ 2.31
FAM49B-208ENST00000518344 GPATCH8Q9UKJ3 1502 aaKnown RBP29.49■■■□□ 2.31
FAM49B-208ENST00000518344 CFDP1Q9UEE9 299 aaPredicted RBP29.47■■■□□ 2.31
FAM49B-208ENST00000518344 AFAP1Q8N556 730 aa29.46■■■□□ 2.31
FAM49B-208ENST00000518344 CDC42BPAQ5VT25 1732 aa29.45■■■□□ 2.3
FAM49B-208ENST00000518344 ARID4BQ4LE39 1312 aaPredicted RBP29.45■■■□□ 2.3
FAM49B-208ENST00000518344 TIAM1Q13009 1591 aa29.44■■■□□ 2.3
FAM49B-208ENST00000518344 MYT1LQ9UL68 1186 aa29.44■■■□□ 2.3
FAM49B-208ENST00000518344 ZMYM4Q5VZL5 1548 aa29.42■■■□□ 2.3
FAM49B-208ENST00000518344 APLP2Q06481 763 aa29.41■■■□□ 2.3
FAM49B-208ENST00000518344 YEATS2Q9ULM3 1422 aa29.41■■■□□ 2.3
FAM49B-208ENST00000518344 ZNF518AQ6AHZ1 1483 aa29.41■■■□□ 2.3
FAM49B-208ENST00000518344 MAGI2Q86UL8 1455 aa29.41■■■□□ 2.3
FAM49B-208ENST00000518344 ZFYVE16Q7Z3T8 1539 aa29.39■■■□□ 2.3
FAM49B-208ENST00000518344 KANK4Q5T7N3 995 aaPredicted RBP29.38■■■□□ 2.29
FAM49B-208ENST00000518344 ARHGEF40Q8TER5 1519 aa29.38■■■□□ 2.29
FAM49B-208ENST00000518344 ABCC1P33527 1531 aa29.37■■■□□ 2.29
FAM49B-208ENST00000518344 ARHGEF12Q9NZN5 1544 aa29.37■■■□□ 2.29
FAM49B-208ENST00000518344 TRAPPC8Q9Y2L5 1435 aa29.37■■■□□ 2.29
FAM49B-208ENST00000518344 LRRC9Q6ZRR7 1453 aa29.36■■■□□ 2.29
FAM49B-208ENST00000518344 HNRNPMP52272 730 aaKnown RBP eCLIP29.36■■■□□ 2.29
FAM49B-208ENST00000518344 NCOA2Q15596 1464 aa29.36■■■□□ 2.29
FAM49B-208ENST00000518344 MAP3K1Q13233 1512 aa29.33■■■□□ 2.29
FAM49B-208ENST00000518344 SAMD9LQ8IVG5 1584 aa29.33■■■□□ 2.29
FAM49B-208ENST00000518344 SUPT6HQ7KZ85 1726 aaKnown RBP29.31■■■□□ 2.28
FAM49B-208ENST00000518344 ZNF644Q9H582 1327 aaPredicted RBP29.3■■■□□ 2.28
FAM49B-208ENST00000518344 KDM5CP41229 1560 aa29.3■■■□□ 2.28
FAM49B-208ENST00000518344 ITSN2Q9NZM3 1697 aa29.29■■■□□ 2.28
FAM49B-208ENST00000518344 SYCP2Q9BX26 1530 aa29.28■■■□□ 2.28
FAM49B-208ENST00000518344 ATP10AO60312 1499 aa29.28■■■□□ 2.28
FAM49B-208ENST00000518344 PLEKHH2Q8IVE3 1493 aa29.28■■■□□ 2.28
FAM49B-208ENST00000518344 KIAA1107Q9UPP5 1409 aa29.27■■■□□ 2.28
FAM49B-208ENST00000518344 MLH3Q9UHC1 1453 aa29.25■■■□□ 2.27
FAM49B-208ENST00000518344 MLECQ14165 292 aa29.24■■■□□ 2.27
FAM49B-208ENST00000518344 HECW2Q9P2P5 1572 aa29.24■■■□□ 2.27
FAM49B-208ENST00000518344 SPAG9O60271 1321 aaKnown RBP29.23■■■□□ 2.27
FAM49B-208ENST00000518344 C9orf84Q5VXU9 1444 aa29.23■■■□□ 2.27
FAM49B-208ENST00000518344 BCORL1Q5H9F3 1711 aa29.18■■■□□ 2.26
FAM49B-208ENST00000518344 ADAMTSL3P82987 1691 aa29.16■■■□□ 2.26
FAM49B-208ENST00000518344 DIP2CQ9Y2E4 1556 aa29.16■■■□□ 2.26
FAM49B-208ENST00000518344 SIGLEC1Q9BZZ2 1709 aa29.16■■■□□ 2.26
FAM49B-208ENST00000518344 MBD5Q9P267 1494 aa29.14■■■□□ 2.26
FAM49B-208ENST00000518344 CAMSAP2Q08AD1 1489 aa29.13■■■□□ 2.25
FAM49B-208ENST00000518344 ABCA6Q8N139 1617 aa29.12■■■□□ 2.25
FAM49B-208ENST00000518344 KIDINS220Q9ULH0 1771 aa29.11■■■□□ 2.25
FAM49B-208ENST00000518344 MADDQ8WXG6 1647 aa29.1■■■□□ 2.25
FAM49B-208ENST00000518344 MYOM3Q5VTT5 1437 aa29.1■■■□□ 2.25
FAM49B-208ENST00000518344 PTPRMP28827 1452 aa29.1■■■□□ 2.25
FAM49B-208ENST00000518344 RSPH4AQ5TD94 716 aa29.09■■■□□ 2.25
FAM49B-208ENST00000518344 PLPPR3Q6T4P5 718 aa29.08■■■□□ 2.25
FAM49B-208ENST00000518344 ATP7AQ04656 1500 aa29.07■■■□□ 2.24
FAM49B-208ENST00000518344 REREQ9P2R6 1566 aa29.05■■■□□ 2.24
FAM49B-208ENST00000518344 MIA2Q96PC5 1412 aa29.05■■■□□ 2.24
FAM49B-208ENST00000518344 CCDC141Q6ZP82 1450 aa29.04■■■□□ 2.24
FAM49B-208ENST00000518344 INO80Q9ULG1 1556 aaPredicted RBP29.02■■■□□ 2.24
FAM49B-208ENST00000518344 TSPY4P0CV99 314 aa29.02■■■□□ 2.24
FAM49B-208ENST00000518344 TSPY10P0CW01 314 aa29.02■■■□□ 2.24
FAM49B-208ENST00000518344 RIMS1Q86UR5 1692 aaKnown RBP29.01■■■□□ 2.23
FAM49B-208ENST00000518344 RTEL1-TNFRSF6BF6WH68 1400 aa29■■■□□ 2.23
FAM49B-208ENST00000518344 AGLP35573 1532 aa28.99■■■□□ 2.23
FAM49B-208ENST00000518344 A2MP01023 1474 aa28.97■■■□□ 2.23
FAM49B-208ENST00000518344 ESF1Q9H501 851 aaKnown RBP28.97■■■□□ 2.23
FAM49B-208ENST00000518344 ARHGEF5Q12774 1597 aa28.96■■■□□ 2.23
FAM49B-208ENST00000518344 FER1L4A9Z1Z3 1794 aa28.93■■■□□ 2.22
FAM49B-208ENST00000518344 FGD6Q6ZV73 1430 aa28.92■■■□□ 2.22
FAM49B-208ENST00000518344 CEBPAP49715 358 aaPredicted RBP28.91■■■□□ 2.22
FAM49B-208ENST00000518344 PPARGC1BQ86YN6 1023 aaKnown RBP28.91■■■□□ 2.22
FAM49B-208ENST00000518344 DHX29Q7Z478 1369 aaKnown RBP28.89■■■□□ 2.22
FAM49B-208ENST00000518344 GGT6Q6P531 493 aa28.89■■■□□ 2.22
FAM49B-208ENST00000518344 PTPN23Q9H3S7 1636 aa28.88■■■□□ 2.21
FAM49B-208ENST00000518344 PLXNC1O60486 1568 aa28.87■■■□□ 2.21
FAM49B-208ENST00000518344 ADGBQ8N7X0 1667 aa28.86■■■□□ 2.21
FAM49B-208ENST00000518344 FAM50AQ14320 339 aaKnown RBP28.84■■■□□ 2.21
FAM49B-208ENST00000518344 KIF3BO15066 747 aa28.83■■■□□ 2.21
FAM49B-208ENST00000518344 TCOF1Q13428 1488 aaKnown RBP28.82■■■□□ 2.2
FAM49B-208ENST00000518344 ABCC5O15440 1437 aa28.81■■■□□ 2.2
FAM49B-208ENST00000518344 CNTLNQ9NXG0 1405 aa28.79■■■□□ 2.2
FAM49B-208ENST00000518344 MAST1Q9Y2H9 1570 aa28.79■■■□□ 2.2
FAM49B-208ENST00000518344 DAPK1P53355 1430 aa28.77■■■□□ 2.2
FAM49B-208ENST00000518344 CHIC2Q9UKJ5 165 aa28.76■■■□□ 2.19
FAM49B-208ENST00000518344 PPP6R1Q9UPN7 881 aa28.75■■■□□ 2.19
FAM49B-208ENST00000518344 RRP7BPQ9NSQ0 103 aa28.74■■■□□ 2.19
FAM49B-208ENST00000518344 ZMYM3Q14202 1370 aa28.73■■■□□ 2.19
FAM49B-208ENST00000518344 SHANK2Q9UPX8 1470 aa28.72■■■□□ 2.19
FAM49B-208ENST00000518344 DNMT1P26358 1616 aaKnown RBP28.71■■■□□ 2.19
FAM49B-208ENST00000518344 LMTK3Q96Q04 1460 aa28.71■■■□□ 2.19
FAM49B-208ENST00000518344 HSPA2P54652 639 aa28.69■■■□□ 2.18
FAM49B-208ENST00000518344 C3P01024 1663 aa28.68■■■□□ 2.18
FAM49B-208ENST00000518344 KIF15Q9NS87 1388 aa28.68■■■□□ 2.18
FAM49B-208ENST00000518344 CLTCQ00610 1675 aaKnown RBP28.67■■■□□ 2.18
FAM49B-208ENST00000518344 WASHC2CQ9Y4E1 1318 aa28.67■■■□□ 2.18
FAM49B-208ENST00000518344 CROCC2H7BZ55 1655 aa28.66■■■□□ 2.18
FAM49B-208ENST00000518344 DUOX2Q9NRD8 1548 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms