RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.15■□□□□ 0.189e-8■□□□□ 8.7
PABPC1-203ENST00000517921 CROCC2H7BZ55 1655 aa16.14■□□□□ 0.17
PABPC1-203ENST00000517921 ARAP3Q8WWN8 1544 aa16.12■□□□□ 0.17
PABPC1-203ENST00000517921 SAMD9LQ8IVG5 1584 aa16.12■□□□□ 0.17
PABPC1-203ENST00000517921 DIP2BQ9P265 1576 aa16.12■□□□□ 0.17
PABPC1-203ENST00000517921 DNMT1P26358 1616 aaKnown RBP16.12■□□□□ 0.17
PABPC1-203ENST00000517921 CAMSAP2Q08AD1 1489 aa16.11■□□□□ 0.17
PABPC1-203ENST00000517921 ARHGAP5Q13017 1502 aa16.1■□□□□ 0.17
PABPC1-203ENST00000517921 KCNH8Q96L42 1107 aa16.1■□□□□ 0.17
PABPC1-203ENST00000517921 GLI2P10070 1586 aa16.09■□□□□ 0.17
PABPC1-203ENST00000517921 MAP3K4Q9Y6R4 1608 aa16.09■□□□□ 0.17
PABPC1-203ENST00000517921 FAM50AQ14320 339 aaKnown RBP16.08■□□□□ 0.16
PABPC1-203ENST00000517921 PLCH2O75038 1416 aa16.07■□□□□ 0.16
PABPC1-203ENST00000517921 ADGBQ8N7X0 1667 aa16.07■□□□□ 0.16
PABPC1-203ENST00000517921 CFDP1Q9UEE9 299 aaPredicted RBP16.06■□□□□ 0.16
PABPC1-203ENST00000517921 ARHGEF5Q12774 1597 aa16.05■□□□□ 0.16
PABPC1-203ENST00000517921 CFAP74Q9C0B2 1584 aa16.05■□□□□ 0.16
PABPC1-203ENST00000517921 TSPOAP1O95153 1857 aa16.05■□□□□ 0.16
PABPC1-203ENST00000517921 ABCC1P33527 1531 aa16.04■□□□□ 0.16
PABPC1-203ENST00000517921 ZNF644Q9H582 1327 aaPredicted RBP16.03■□□□□ 0.16
PABPC1-203ENST00000517921 GCC2Q8IWJ2 1684 aa16.03■□□□□ 0.16
PABPC1-203ENST00000517921 SYCP2Q9BX26 1530 aa16.03■□□□□ 0.16
PABPC1-203ENST00000517921 PTPRKQ15262 1439 aa16.02■□□□□ 0.16
PABPC1-203ENST00000517921 PPRC1Q5VV67 1664 aaKnown RBP16.02■□□□□ 0.16
PABPC1-203ENST00000517921 DAPK1P53355 1430 aa16.02■□□□□ 0.15
PABPC1-203ENST00000517921 PLEKHH2Q8IVE3 1493 aa16■□□□□ 0.15
PABPC1-203ENST00000517921 ABCC5O15440 1437 aa16■□□□□ 0.15
PABPC1-203ENST00000517921 FANCAO15360 1455 aa15.99■□□□□ 0.15
PABPC1-203ENST00000517921 MBD5Q9P267 1494 aa15.99■□□□□ 0.15
PABPC1-203ENST00000517921 CD109Q6YHK3 1445 aa15.99■□□□□ 0.15
PABPC1-203ENST00000517921 SHANK2Q9UPX8 1470 aa15.98■□□□□ 0.15
PABPC1-203ENST00000517921 ITGAEP38570 1179 aa15.98■□□□□ 0.15
PABPC1-203ENST00000517921 ZNF777Q9ULD5 760 aaPredicted RBP15.98■□□□□ 0.15
PABPC1-203ENST00000517921 KDM6BO15054 1643 aa15.97■□□□□ 0.15
PABPC1-203ENST00000517921 CCDC141Q6ZP82 1450 aa15.97■□□□□ 0.15
PABPC1-203ENST00000517921 KIAA1107Q9UPP5 1409 aa15.97■□□□□ 0.15
PABPC1-203ENST00000517921 ARHGEF12Q9NZN5 1544 aa15.97■□□□□ 0.15
PABPC1-203ENST00000517921 MAST1Q9Y2H9 1570 aa15.96■□□□□ 0.15
PABPC1-203ENST00000517921 AKNAQ7Z591 1439 aa15.95■□□□□ 0.14
PABPC1-203ENST00000517921 EFCAB2Q5VUJ9 269 aa15.95■□□□□ 0.14
PABPC1-203ENST00000517921 SENP3Q9H4L4 574 aaPredicted RBP15.95■□□□□ 0.14
PABPC1-203ENST00000517921 ADGRL2O95490 1459 aa15.94■□□□□ 0.14
PABPC1-203ENST00000517921 ADGRL1O94910 1474 aa15.92■□□□□ 0.14
PABPC1-203ENST00000517921 NEO1Q92859 1461 aa15.92■□□□□ 0.14
PABPC1-203ENST00000517921 HFM1A2PYH4 1435 aa15.92■□□□□ 0.14
PABPC1-203ENST00000517921 PLXNC1O60486 1568 aa15.92■□□□□ 0.14
PABPC1-203ENST00000517921 TEX14Q8IWB6 1497 aa15.91■□□□□ 0.14
PABPC1-203ENST00000517921 ROCK1Q13464 1354 aa15.91■□□□□ 0.14
PABPC1-203ENST00000517921 C9orf84Q5VXU9 1444 aa15.91■□□□□ 0.14
PABPC1-203ENST00000517921 RICTORQ6R327 1708 aa15.91■□□□□ 0.14
PABPC1-203ENST00000517921 NAIPQ13075 1403 aa15.9■□□□□ 0.14
PABPC1-203ENST00000517921 INO80Q9ULG1 1556 aaPredicted RBP15.9■□□□□ 0.14
PABPC1-203ENST00000517921 SETD5Q9C0A6 1442 aa15.89■□□□□ 0.13
PABPC1-203ENST00000517921 TRAPPC8Q9Y2L5 1435 aa15.89■□□□□ 0.13
PABPC1-203ENST00000517921 HNRNPMP52272 730 aaKnown RBP eCLIP15.89■□□□□ 0.13
PABPC1-203ENST00000517921 ZFYVE16Q7Z3T8 1539 aa15.89■□□□□ 0.13
PABPC1-203ENST00000517921 KDM5CP41229 1560 aa15.87■□□□□ 0.13
PABPC1-203ENST00000517921 RAB3GAP2Q9H2M9 1393 aa15.87■□□□□ 0.13
PABPC1-203ENST00000517921 NCOA1Q15788 1441 aa15.86■□□□□ 0.13
PABPC1-203ENST00000517921 SCAPERQ9BY12 1400 aa15.86■□□□□ 0.13
PABPC1-203ENST00000517921 KIDINS220Q9ULH0 1771 aa15.86■□□□□ 0.13
PABPC1-203ENST00000517921 RSPH4AQ5TD94 716 aa15.86■□□□□ 0.13
PABPC1-203ENST00000517921 CHIC2Q9UKJ5 165 aa15.86■□□□□ 0.13
PABPC1-203ENST00000517921 FRMPD1Q5SYB0 1578 aa15.85■□□□□ 0.13
PABPC1-203ENST00000517921 POGZQ7Z3K3 1410 aa15.85■□□□□ 0.13
PABPC1-203ENST00000517921 ATP7AQ04656 1500 aa15.84■□□□□ 0.13
PABPC1-203ENST00000517921 ZNF518AQ6AHZ1 1483 aa15.84■□□□□ 0.13
PABPC1-203ENST00000517921 HECW2Q9P2P5 1572 aa15.83■□□□□ 0.13
PABPC1-203ENST00000517921 RRP7BPQ9NSQ0 103 aa15.83■□□□□ 0.12
PABPC1-203ENST00000517921 ANKRD30AQ9BXX3 1397 aa15.83■□□□□ 0.12
PABPC1-203ENST00000517921 DENND4BO75064 1496 aaPredicted RBP15.81■□□□□ 0.12
PABPC1-203ENST00000517921 TSPY4P0CV99 314 aa15.81■□□□□ 0.12
PABPC1-203ENST00000517921 TSPY10P0CW01 314 aa15.81■□□□□ 0.12
PABPC1-203ENST00000517921 COL17A1Q9UMD9 1497 aaPredicted RBP15.81■□□□□ 0.12
PABPC1-203ENST00000517921 RTEL1-TNFRSF6BF6WH68 1400 aa15.8■□□□□ 0.12
PABPC1-203ENST00000517921 KIF15Q9NS87 1388 aa15.79■□□□□ 0.12
PABPC1-203ENST00000517921 ABCA6Q8N139 1617 aa15.79■□□□□ 0.12
PABPC1-203ENST00000517921 ZMYM4Q5VZL5 1548 aa15.78■□□□□ 0.12
PABPC1-203ENST00000517921 DUOX2Q9NRD8 1548 aa15.78■□□□□ 0.12
PABPC1-203ENST00000517921 HRCP23327 699 aa15.77■□□□□ 0.12
PABPC1-203ENST00000517921 AFAP1Q8N556 730 aa15.77■□□□□ 0.12
PABPC1-203ENST00000517921 SPAG9O60271 1321 aaKnown RBP15.76■□□□□ 0.11
PABPC1-203ENST00000517921 KDM4FA0A1W2PPD8 638 aa15.76■□□□□ 0.11
PABPC1-203ENST00000517921 MLH3Q9UHC1 1453 aa15.76■□□□□ 0.11
PABPC1-203ENST00000517921 ANKRD50Q9ULJ7 1429 aa15.76■□□□□ 0.11
PABPC1-203ENST00000517921 EIF2AK4Q9P2K8 1649 aaKnown RBP15.76■□□□□ 0.11
PABPC1-203ENST00000517921 UNC13BO14795 1591 aa15.75■□□□□ 0.11
PABPC1-203ENST00000517921 DIP2CQ9Y2E4 1556 aa15.75■□□□□ 0.11
PABPC1-203ENST00000517921 DHX57Q6P158 1386 aaKnown RBP15.75■□□□□ 0.11
PABPC1-203ENST00000517921 BCORL1Q5H9F3 1711 aa15.73■□□□□ 0.11
PABPC1-203ENST00000517921 DEPDC5O75140 1603 aa15.72■□□□□ 0.11
PABPC1-203ENST00000517921 ERBINQ96RT1 1412 aa15.72■□□□□ 0.11
PABPC1-203ENST00000517921 KDM5DQ9BY66 1539 aa15.72■□□□□ 0.11
PABPC1-203ENST00000517921 RAPGEF3O95398 923 aa15.7■□□□□ 0.1
PABPC1-203ENST00000517921 PHF23Q9BUL5 403 aaPredicted RBP15.69■□□□□ 0.1
PABPC1-203ENST00000517921 MAGI2Q86UL8 1455 aa15.69■□□□□ 0.1
PABPC1-203ENST00000517921 ARHGEF40Q8TER5 1519 aa15.68■□□□□ 0.1
PABPC1-203ENST00000517921 IQGAP3Q86VI3 1631 aa15.68■□□□□ 0.1
PABPC1-203ENST00000517921 CCER1Q8TC90 406 aaPredicted RBP15.68■□□□□ 0.1
PABPC1-203ENST00000517921 RNF17Q9BXT8 1623 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms