RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 CYB5RLQ6IPT4 315 aa15.82■□□□□ 0.12
PCDHGA6-201ENST00000517434 CHMP4BQ9H444 224 aaKnown RBP15.82■□□□□ 0.12
PCDHGA6-201ENST00000517434 NPHP1O15259 732 aa15.81■□□□□ 0.12
PCDHGA6-201ENST00000517434 RUSC2Q8N2Y8 1516 aa15.81■□□□□ 0.12
PCDHGA6-201ENST00000517434 SRPK2P78362 688 aaKnown RBP15.79■□□□□ 0.12
PCDHGA6-201ENST00000517434 NCAPD3P42695 1498 aa15.79■□□□□ 0.12
PCDHGA6-201ENST00000517434 KIF3BO15066 747 aa15.79■□□□□ 0.12
PCDHGA6-201ENST00000517434 HDGFL2Q7Z4V5 671 aaPredicted RBP15.79■□□□□ 0.12
PCDHGA6-201ENST00000517434 DCAF11Q8TEB1 546 aa15.78■□□□□ 0.12
PCDHGA6-201ENST00000517434 CHMP4AQ9BY43 222 aa15.77■□□□□ 0.12
PCDHGA6-201ENST00000517434 WASHC2CQ9Y4E1 1318 aa15.76■□□□□ 0.11
PCDHGA6-201ENST00000517434 AEBP2Q6ZN18 517 aaPredicted RBP15.75■□□□□ 0.11
PCDHGA6-201ENST00000517434 MS4A1P11836 297 aa15.74■□□□□ 0.11
PCDHGA6-201ENST00000517434 MSNP26038 577 aaKnown RBP15.74■□□□□ 0.11
PCDHGA6-201ENST00000517434 PKD2Q13563 968 aa15.73■□□□□ 0.11
PCDHGA6-201ENST00000517434 B4GALNT3Q6L9W6 998 aa15.72■□□□□ 0.11
PCDHGA6-201ENST00000517434 NUP155O75694 1391 aa15.72■□□□□ 0.11
PCDHGA6-201ENST00000517434 RSPH6AQ9H0K4 717 aa15.71■□□□□ 0.11
PCDHGA6-201ENST00000517434 EIF3AQ14152 1382 aaKnown RBP15.7■□□□□ 0.1
PCDHGA6-201ENST00000517434 SETD5Q9C0A6 1442 aa15.69■□□□□ 0.1
PCDHGA6-201ENST00000517434 CHAF1AQ13111 956 aaPredicted RBP15.69■□□□□ 0.1
PCDHGA6-201ENST00000517434 HIRIP3Q9BW71 556 aaPredicted RBP15.69■□□□□ 0.1
PCDHGA6-201ENST00000517434 GAPVD1Q14C86 1478 aa15.69■□□□□ 0.1
PCDHGA6-201ENST00000517434 AMER1Q5JTC6 1135 aaPredicted RBP15.67■□□□□ 0.1
PCDHGA6-201ENST00000517434 HSP90AA2PQ14568 343 aaPredicted RBP15.67■□□□□ 0.1
PCDHGA6-201ENST00000517434 VSIG10Q8N0Z9 540 aa15.67■□□□□ 0.1
PCDHGA6-201ENST00000517434 U2SURPO15042 1029 aaKnown RBP15.65■□□□□ 0.1
PCDHGA6-201ENST00000517434 CSB-PGBD3P0DP91 1061 aa15.65■□□□□ 0.1
PCDHGA6-201ENST00000517434 MORC1Q86VD1 984 aa15.65■□□□□ 0.1
PCDHGA6-201ENST00000517434 STK26Q9P289 416 aa15.65■□□□□ 0.1
PCDHGA6-201ENST00000517434 FTSJ3Q8IY81 847 aaKnown RBP15.64■□□□□ 0.09
PCDHGA6-201ENST00000517434 HNRNPMP52272 730 aaKnown RBP eCLIP15.64■□□□□ 0.09
PCDHGA6-201ENST00000517434 KANK4Q5T7N3 995 aaPredicted RBP15.64■□□□□ 0.09
PCDHGA6-201ENST00000517434 RTF1Q92541 710 aaKnown RBP15.64■□□□□ 0.09
PCDHGA6-201ENST00000517434 FAM69CQ0P6D2 419 aa15.63■□□□□ 0.09
PCDHGA6-201ENST00000517434 UACAQ9BZF9 1416 aa15.63■□□□□ 0.09
PCDHGA6-201ENST00000517434 TERF2IPQ9NYB0 399 aa15.63■□□□□ 0.09
PCDHGA6-201ENST00000517434 UNC13AQ9UPW8 1703 aa15.63■□□□□ 0.09
PCDHGA6-201ENST00000517434 CALD1Q05682 793 aaKnown RBP15.63■□□□□ 0.09
PCDHGA6-201ENST00000517434 CASC1Q6TDU7 716 aa15.63■□□□□ 0.09
PCDHGA6-201ENST00000517434 PAK3O75914 559 aaPredicted RBP15.62■□□□□ 0.09
PCDHGA6-201ENST00000517434 FHOD3Q2V2M9 1422 aa15.62■□□□□ 0.09
PCDHGA6-201ENST00000517434 RGS3P49796 1198 aa15.61■□□□□ 0.09
PCDHGA6-201ENST00000517434 ZRSR1Q15695 479 aaKnown RBP15.6■□□□□ 0.09
PCDHGA6-201ENST00000517434 BICRAQ9NZM4 1560 aa15.59■□□□□ 0.09
PCDHGA6-201ENST00000517434 GOLGA2Q08379 1002 aa15.59■□□□□ 0.09
PCDHGA6-201ENST00000517434 SAFB2Q14151 953 aaKnown RBP eCLIP15.59■□□□□ 0.09
PCDHGA6-201ENST00000517434 USP35Q9P2H5 1018 aa15.59■□□□□ 0.09
PCDHGA6-201ENST00000517434 VGFO15240 615 aaPredicted RBP15.59■□□□□ 0.09
PCDHGA6-201ENST00000517434 IPO9Q96P70 1041 aaKnown RBP15.59■□□□□ 0.09
PCDHGA6-201ENST00000517434 CCER2I3L3R5 266 aa15.58■□□□□ 0.09
PCDHGA6-201ENST00000517434 MPHOSPH9Q99550 1183 aa15.58■□□□□ 0.09
PCDHGA6-201ENST00000517434 FGD5Q6ZNL6 1462 aa15.58■□□□□ 0.08
PCDHGA6-201ENST00000517434 TMX4Q9H1E5 349 aaPredicted RBP15.58■□□□□ 0.08
PCDHGA6-201ENST00000517434 NGDNQ8NEJ9 315 aaKnown RBP15.58■□□□□ 0.08
PCDHGA6-201ENST00000517434 CCDC9Q9Y3X0 531 aaKnown RBP15.58■□□□□ 0.08
PCDHGA6-201ENST00000517434 GRIN2BQ13224 1484 aa15.58■□□□□ 0.08
PCDHGA6-201ENST00000517434 PLCB2Q00722 1185 aa15.58■□□□□ 0.08
PCDHGA6-201ENST00000517434 TNNT3P45378 269 aaPredicted RBP15.57■□□□□ 0.08
PCDHGA6-201ENST00000517434 NRDCO43847 1150 aa15.57■□□□□ 0.08
PCDHGA6-201ENST00000517434 HSP90AB1P08238 724 aaKnown RBP15.56■□□□□ 0.08
PCDHGA6-201ENST00000517434 SIN3AQ96ST3 1273 aa15.56■□□□□ 0.08
PCDHGA6-201ENST00000517434 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.56■□□□□ 0.08
PCDHGA6-201ENST00000517434 MRC2Q9UBG0 1479 aa15.56■□□□□ 0.08
PCDHGA6-201ENST00000517434 NEUROD2Q15784 382 aa15.55■□□□□ 0.08
PCDHGA6-201ENST00000517434 GOLGA6L6A8MZA4 724 aa15.55■□□□□ 0.08
PCDHGA6-201ENST00000517434 SOX12O15370 315 aa15.55■□□□□ 0.08
PCDHGA6-201ENST00000517434 HDAC5Q9UQL6 1122 aa15.55■□□□□ 0.08
PCDHGA6-201ENST00000517434 ROCK2O75116 1388 aaKnown RBP15.54■□□□□ 0.08
PCDHGA6-201ENST00000517434 IFT140Q96RY7 1462 aa15.53■□□□□ 0.08
PCDHGA6-201ENST00000517434 OS9Q13438 667 aaPredicted RBP15.53■□□□□ 0.08
PCDHGA6-201ENST00000517434 HSCBQ8IWL3 235 aa15.53■□□□□ 0.08
PCDHGA6-201ENST00000517434 TCERG1O14776 1098 aaKnown RBP15.52■□□□□ 0.08
PCDHGA6-201ENST00000517434 PTMSP20962 102 aa15.52■□□□□ 0.08
PCDHGA6-201ENST00000517434 CC2D1BQ5T0F9 858 aaKnown RBP15.52■□□□□ 0.07
PCDHGA6-201ENST00000517434 STAC3Q96MF2 364 aa15.52■□□□□ 0.07
PCDHGA6-201ENST00000517434 GOLGA6L3A6NEY3 463 aa15.51■□□□□ 0.07
PCDHGA6-201ENST00000517434 SYNJ1O43426 1573 aa15.5■□□□□ 0.07
PCDHGA6-201ENST00000517434 KIAA2012Q0VF49 1180 aa15.49■□□□□ 0.07
PCDHGA6-201ENST00000517434 KTN1Q86UP2 1357 aaKnown RBP15.49■□□□□ 0.07
PCDHGA6-201ENST00000517434 IGF1RP08069 1367 aa15.49■□□□□ 0.07
PCDHGA6-201ENST00000517434 PRKCSHP14314 528 aaPredicted RBP15.49■□□□□ 0.07
PCDHGA6-201ENST00000517434 CFAP44Q96MT7 982 aa15.48■□□□□ 0.07
PCDHGA6-201ENST00000517434 ARID3AQ99856 593 aa15.48■□□□□ 0.07
PCDHGA6-201ENST00000517434 CFTRP13569 1480 aa15.47■□□□□ 0.07
PCDHGA6-201ENST00000517434 CCDC144AA2RUR9 1427 aa15.46■□□□□ 0.07
PCDHGA6-201ENST00000517434 GBP4Q96PP9 640 aa15.46■□□□□ 0.07
PCDHGA6-201ENST00000517434 FANCIQ9NVI1 1328 aa15.46■□□□□ 0.07
PCDHGA6-201ENST00000517434 IPO8O15397 1037 aaKnown RBP15.45■□□□□ 0.06
PCDHGA6-201ENST00000517434 LMOD3Q0VAK6 560 aa15.45■□□□□ 0.06
PCDHGA6-201ENST00000517434 HMGXB3Q12766 1538 aa15.45■□□□□ 0.06
PCDHGA6-201ENST00000517434 AMPHP49418 695 aa15.44■□□□□ 0.06
PCDHGA6-201ENST00000517434 RALBP1Q15311 655 aa15.44■□□□□ 0.06
PCDHGA6-201ENST00000517434 AQRO60306 1485 aaKnown RBP eCLIP15.44■□□□□ 0.06
PCDHGA6-201ENST00000517434 RAD54L2Q9Y4B4 1467 aa15.44■□□□□ 0.06
PCDHGA6-201ENST00000517434 MYOM3Q5VTT5 1437 aa15.43■□□□□ 0.06
PCDHGA6-201ENST00000517434 GZF1Q9H116 711 aaPredicted RBP15.43■□□□□ 0.06
PCDHGA6-201ENST00000517434 GSE1Q14687 1217 aa15.42■□□□□ 0.06
PCDHGA6-201ENST00000517434 PKNOX2Q96KN3 472 aa15.42■□□□□ 0.06
PCDHGA6-201ENST00000517434 SENP3-EIF4A1A0A087X0R7 540 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms