RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 MAP3K4Q9Y6R4 1608 aa8.3□□□□□ -1.08
SCARNA16.4-201ENST00000516956 FAM50AQ14320 339 aaKnown RBP8.3□□□□□ -1.08
SCARNA16.4-201ENST00000516956 ITSN2Q9NZM3 1697 aa8.3□□□□□ -1.08
SCARNA16.4-201ENST00000516956 TSPY4P0CV99 314 aa8.29□□□□□ -1.08
SCARNA16.4-201ENST00000516956 TSPY10P0CW01 314 aa8.29□□□□□ -1.08
SCARNA16.4-201ENST00000516956 PLEKHH2Q8IVE3 1493 aa8.29□□□□□ -1.08
SCARNA16.4-201ENST00000516956 NEO1Q92859 1461 aa8.29□□□□□ -1.08
SCARNA16.4-201ENST00000516956 GPATCH8Q9UKJ3 1502 aaKnown RBP8.29□□□□□ -1.08
SCARNA16.4-201ENST00000516956 MYOM3Q5VTT5 1437 aa8.29□□□□□ -1.08
SCARNA16.4-201ENST00000516956 AKNAQ7Z591 1439 aa8.29□□□□□ -1.08
SCARNA16.4-201ENST00000516956 RSPH4AQ5TD94 716 aa8.28□□□□□ -1.08
SCARNA16.4-201ENST00000516956 ARAP3Q8WWN8 1544 aa8.28□□□□□ -1.08
SCARNA16.4-201ENST00000516956 MIA2Q96PC5 1412 aa8.28□□□□□ -1.08
SCARNA16.4-201ENST00000516956 ADGRL1O94910 1474 aa8.27□□□□□ -1.09
SCARNA16.4-201ENST00000516956 HNRNPMP52272 730 aaKnown RBP eCLIP8.27□□□□□ -1.09
SCARNA16.4-201ENST00000516956 PREX2Q70Z35 1606 aa8.27□□□□□ -1.09
SCARNA16.4-201ENST00000516956 SCAPERQ9BY12 1400 aa8.27□□□□□ -1.09
SCARNA16.4-201ENST00000516956 DENND4BO75064 1496 aaPredicted RBP8.26□□□□□ -1.09
SCARNA16.4-201ENST00000516956 ITGAEP38570 1179 aa8.25□□□□□ -1.09
SCARNA16.4-201ENST00000516956 FGD6Q6ZV73 1430 aa8.25□□□□□ -1.09
SCARNA16.4-201ENST00000516956 CDC42BPAQ5VT25 1732 aa8.25□□□□□ -1.09
SCARNA16.4-201ENST00000516956 ZNF644Q9H582 1327 aaPredicted RBP8.25□□□□□ -1.09
SCARNA16.4-201ENST00000516956 KDM6BO15054 1643 aa8.25□□□□□ -1.09
SCARNA16.4-201ENST00000516956 RAPGEF3O95398 923 aa8.24□□□□□ -1.09
SCARNA16.4-201ENST00000516956 CAMSAP2Q08AD1 1489 aa8.24□□□□□ -1.09
SCARNA16.4-201ENST00000516956 SPAG9O60271 1321 aaKnown RBP8.24□□□□□ -1.09
SCARNA16.4-201ENST00000516956 CDC42BPBQ9Y5S2 1711 aa8.23□□□□□ -1.09
SCARNA16.4-201ENST00000516956 KIAA1107Q9UPP5 1409 aa8.23□□□□□ -1.09
SCARNA16.4-201ENST00000516956 AFAP1Q8N556 730 aa8.23□□□□□ -1.09
SCARNA16.4-201ENST00000516956 PTPN23Q9H3S7 1636 aa8.22□□□□□ -1.09
SCARNA16.4-201ENST00000516956 ZNF518AQ6AHZ1 1483 aa8.22□□□□□ -1.09
SCARNA16.4-201ENST00000516956 PPRC1Q5VV67 1664 aaKnown RBP8.21□□□□□ -1.09
SCARNA16.4-201ENST00000516956 ABCC1P33527 1531 aa8.21□□□□□ -1.1
SCARNA16.4-201ENST00000516956 SYCP2Q9BX26 1530 aa8.21□□□□□ -1.1
SCARNA16.4-201ENST00000516956 SAMD9LQ8IVG5 1584 aa8.21□□□□□ -1.1
SCARNA16.4-201ENST00000516956 ARID4BQ4LE39 1312 aaPredicted RBP8.21□□□□□ -1.1
SCARNA16.4-201ENST00000516956 POGZQ7Z3K3 1410 aa8.2□□□□□ -1.1
SCARNA16.4-201ENST00000516956 CCDC141Q6ZP82 1450 aa8.2□□□□□ -1.1
SCARNA16.4-201ENST00000516956 CHIC2Q9UKJ5 165 aa8.2□□□□□ -1.1
SCARNA16.4-201ENST00000516956 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.19□□□□□ -1.1
SCARNA16.4-201ENST00000516956 TRAPPC8Q9Y2L5 1435 aa8.19□□□□□ -1.1
SCARNA16.4-201ENST00000516956 TCOF1Q13428 1488 aaKnown RBP8.19□□□□□ -1.1
SCARNA16.4-201ENST00000516956 ESF1Q9H501 851 aaKnown RBP8.18□□□□□ -1.1
SCARNA16.4-201ENST00000516956 ANKRD30AQ9BXX3 1397 aa8.18□□□□□ -1.1
SCARNA16.4-201ENST00000516956 MAGI2Q86UL8 1455 aa8.18□□□□□ -1.1
SCARNA16.4-201ENST00000516956 TRIM26Q12899 539 aaPredicted RBP8.17□□□□□ -1.1
SCARNA16.4-201ENST00000516956 RRP7BPQ9NSQ0 103 aa8.17□□□□□ -1.1
SCARNA16.4-201ENST00000516956 DAPK1P53355 1430 aa8.17□□□□□ -1.1
SCARNA16.4-201ENST00000516956 C9orf84Q5VXU9 1444 aa8.17□□□□□ -1.1
SCARNA16.4-201ENST00000516956 RRBP1Q9P2E9 1410 aaKnown RBP8.17□□□□□ -1.1
SCARNA16.4-201ENST00000516956 ARHGEF12Q9NZN5 1544 aa8.17□□□□□ -1.1
SCARNA16.4-201ENST00000516956 ARHGEF5Q12774 1597 aa8.17□□□□□ -1.1
SCARNA16.4-201ENST00000516956 ZFYVE16Q7Z3T8 1539 aa8.16□□□□□ -1.1
SCARNA16.4-201ENST00000516956 MBD5Q9P267 1494 aa8.16□□□□□ -1.1
SCARNA16.4-201ENST00000516956 COL17A1Q9UMD9 1497 aaPredicted RBP8.16□□□□□ -1.1
SCARNA16.4-201ENST00000516956 HECW2Q9P2P5 1572 aa8.15□□□□□ -1.1
SCARNA16.4-201ENST00000516956 MLH3Q9UHC1 1453 aa8.15□□□□□ -1.1
SCARNA16.4-201ENST00000516956 RTEL1-TNFRSF6BF6WH68 1400 aa8.15□□□□□ -1.1
SCARNA16.4-201ENST00000516956 ABCC5O15440 1437 aa8.15□□□□□ -1.1
SCARNA16.4-201ENST00000516956 RICTORQ6R327 1708 aa8.15□□□□□ -1.11
SCARNA16.4-201ENST00000516956 DNMT1P26358 1616 aaKnown RBP8.14□□□□□ -1.11
SCARNA16.4-201ENST00000516956 ATP7AQ04656 1500 aa8.14□□□□□ -1.11
SCARNA16.4-201ENST00000516956 ATP10AO60312 1499 aa8.14□□□□□ -1.11
SCARNA16.4-201ENST00000516956 MLECQ14165 292 aa8.14□□□□□ -1.11
SCARNA16.4-201ENST00000516956 ZMYM4Q5VZL5 1548 aa8.13□□□□□ -1.11
SCARNA16.4-201ENST00000516956 SHANK2Q9UPX8 1470 aa8.13□□□□□ -1.11
SCARNA16.4-201ENST00000516956 KIF15Q9NS87 1388 aa8.13□□□□□ -1.11
SCARNA16.4-201ENST00000516956 KDM5CP41229 1560 aa8.13□□□□□ -1.11
SCARNA16.4-201ENST00000516956 KIF3BO15066 747 aa8.12□□□□□ -1.11
SCARNA16.4-201ENST00000516956 GGT6Q6P531 493 aa8.12□□□□□ -1.11
SCARNA16.4-201ENST00000516956 FRMPD1Q5SYB0 1578 aa8.12□□□□□ -1.11
SCARNA16.4-201ENST00000516956 A2MP01023 1474 aa8.12□□□□□ -1.11
SCARNA16.4-201ENST00000516956 YEATS2Q9ULM3 1422 aa8.12□□□□□ -1.11
SCARNA16.4-201ENST00000516956 ROCK1Q13464 1354 aa8.11□□□□□ -1.11
SCARNA16.4-201ENST00000516956 DHX29Q7Z478 1369 aaKnown RBP8.11□□□□□ -1.11
SCARNA16.4-201ENST00000516956 ACIN1Q9UKV3 1341 aaKnown RBP8.11□□□□□ -1.11
SCARNA16.4-201ENST00000516956 MAST1Q9Y2H9 1570 aa8.11□□□□□ -1.11
SCARNA16.4-201ENST00000516956 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.11□□□□□ -1.11
SCARNA16.4-201ENST00000516956 ARHGEF40Q8TER5 1519 aa8.11□□□□□ -1.11
SCARNA16.4-201ENST00000516956 KANK1Q14678 1352 aa8.1□□□□□ -1.11
SCARNA16.4-201ENST00000516956 INO80Q9ULG1 1556 aaPredicted RBP8.1□□□□□ -1.11
SCARNA16.4-201ENST00000516956 DUOX2Q9NRD8 1548 aa8.1□□□□□ -1.11
SCARNA16.4-201ENST00000516956 TRIM52Q96A61 297 aa8.1□□□□□ -1.11
SCARNA16.4-201ENST00000516956 CROCC2H7BZ55 1655 aa8.1□□□□□ -1.11
SCARNA16.4-201ENST00000516956 ADGBQ8N7X0 1667 aa8.1□□□□□ -1.11
SCARNA16.4-201ENST00000516956 NCOA1Q15788 1441 aa8.1□□□□□ -1.11
SCARNA16.4-201ENST00000516956 KIDINS220Q9ULH0 1771 aa8.1□□□□□ -1.11
SCARNA16.4-201ENST00000516956 PLXNC1O60486 1568 aa8.09□□□□□ -1.11
SCARNA16.4-201ENST00000516956 DIP2CQ9Y2E4 1556 aa8.09□□□□□ -1.11
SCARNA16.4-201ENST00000516956 ADGRL2O95490 1459 aa8.08□□□□□ -1.12
SCARNA16.4-201ENST00000516956 ABCA6Q8N139 1617 aa8.08□□□□□ -1.12
SCARNA16.4-201ENST00000516956 PCGF6Q9BYE7 350 aa8.08□□□□□ -1.12
SCARNA16.4-201ENST00000516956 ERBINQ96RT1 1412 aa8.08□□□□□ -1.12
SCARNA16.4-201ENST00000516956 ANKRD50Q9ULJ7 1429 aa8.08□□□□□ -1.12
SCARNA16.4-201ENST00000516956 WASHC2CQ9Y4E1 1318 aa8.07□□□□□ -1.12
SCARNA16.4-201ENST00000516956 PTPRKQ15262 1439 aa8.07□□□□□ -1.12
SCARNA16.4-201ENST00000516956 PLPPR3Q6T4P5 718 aa8.07□□□□□ -1.12
SCARNA16.4-201ENST00000516956 PPP6R1Q9UPN7 881 aa8.07□□□□□ -1.12
SCARNA16.4-201ENST00000516956 SETD5Q9C0A6 1442 aa8.06□□□□□ -1.12
SCARNA16.4-201ENST00000516956 REREQ9P2R6 1566 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms