RNA–Protein interactions for RNA: ENST00000516882.1

SCARNA18.2-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 84 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.2-201ENST00000516882 FRMPD1Q5SYB0 1578 aa11.34□□□□□ -0.59
SCARNA18.2-201ENST00000516882 KDM4FA0A1W2PPD8 638 aa11.34□□□□□ -0.59
SCARNA18.2-201ENST00000516882 MTUS2Q5JR59 1369 aa11.32□□□□□ -0.6
SCARNA18.2-201ENST00000516882 SCAPERQ9BY12 1400 aa11.32□□□□□ -0.6
SCARNA18.2-201ENST00000516882 ZMYM4Q5VZL5 1548 aa11.3□□□□□ -0.6
SCARNA18.2-201ENST00000516882 ARHGEF40Q8TER5 1519 aa11.3□□□□□ -0.6
SCARNA18.2-201ENST00000516882 MYT1LQ9UL68 1186 aa11.3□□□□□ -0.6
SCARNA18.2-201ENST00000516882 MAGI2Q86UL8 1455 aa11.3□□□□□ -0.6
SCARNA18.2-201ENST00000516882 ARID4BQ4LE39 1312 aaPredicted RBP11.3□□□□□ -0.6
SCARNA18.2-201ENST00000516882 ITSN2Q9NZM3 1697 aa11.3□□□□□ -0.6
SCARNA18.2-201ENST00000516882 ZFYVE16Q7Z3T8 1539 aa11.3□□□□□ -0.6
SCARNA18.2-201ENST00000516882 POGZQ7Z3K3 1410 aa11.29□□□□□ -0.6
SCARNA18.2-201ENST00000516882 ZNF518AQ6AHZ1 1483 aa11.29□□□□□ -0.6
SCARNA18.2-201ENST00000516882 EHBP1L1Q8N3D4 1523 aa11.29□□□□□ -0.6
SCARNA18.2-201ENST00000516882 SUPT6HQ7KZ85 1726 aaKnown RBP11.29□□□□□ -0.6
SCARNA18.2-201ENST00000516882 CCNB3Q8WWL7 1395 aa11.28□□□□□ -0.6
SCARNA18.2-201ENST00000516882 VPS8Q8N3P4 1428 aa11.27□□□□□ -0.6
SCARNA18.2-201ENST00000516882 BCORL1Q5H9F3 1711 aa11.27□□□□□ -0.61
SCARNA18.2-201ENST00000516882 HECW2Q9P2P5 1572 aa11.26□□□□□ -0.61
SCARNA18.2-201ENST00000516882 ZNF777Q9ULD5 760 aaPredicted RBP11.26□□□□□ -0.61
SCARNA18.2-201ENST00000516882 ABCC1P33527 1531 aa11.25□□□□□ -0.61
SCARNA18.2-201ENST00000516882 TIAM1Q13009 1591 aa11.25□□□□□ -0.61
SCARNA18.2-201ENST00000516882 ADAMTSL3P82987 1691 aa11.25□□□□□ -0.61
SCARNA18.2-201ENST00000516882 CFDP1Q9UEE9 299 aaPredicted RBP11.25□□□□□ -0.61
SCARNA18.2-201ENST00000516882 KDM5CP41229 1560 aa11.24□□□□□ -0.61
SCARNA18.2-201ENST00000516882 APLP2Q06481 763 aa11.24□□□□□ -0.61
SCARNA18.2-201ENST00000516882 GPATCH8Q9UKJ3 1502 aaKnown RBP11.24□□□□□ -0.61
SCARNA18.2-201ENST00000516882 AFAP1Q8N556 730 aa11.23□□□□□ -0.61
SCARNA18.2-201ENST00000516882 YEATS2Q9ULM3 1422 aa11.23□□□□□ -0.61
SCARNA18.2-201ENST00000516882 PLEKHH2Q8IVE3 1493 aa11.23□□□□□ -0.61
SCARNA18.2-201ENST00000516882 SAMD9LQ8IVG5 1584 aa11.23□□□□□ -0.61
SCARNA18.2-201ENST00000516882 FER1L4A9Z1Z3 1794 aa11.23□□□□□ -0.61
SCARNA18.2-201ENST00000516882 ATP10AO60312 1499 aa11.22□□□□□ -0.61
SCARNA18.2-201ENST00000516882 C9orf84Q5VXU9 1444 aa11.22□□□□□ -0.61
SCARNA18.2-201ENST00000516882 RIMS1Q86UR5 1692 aaKnown RBP11.22□□□□□ -0.61
SCARNA18.2-201ENST00000516882 MADDQ8WXG6 1647 aa11.21□□□□□ -0.61
SCARNA18.2-201ENST00000516882 SYCP2Q9BX26 1530 aa11.21□□□□□ -0.61
SCARNA18.2-201ENST00000516882 MAP3K1Q13233 1512 aa11.2□□□□□ -0.62
SCARNA18.2-201ENST00000516882 KIDINS220Q9ULH0 1771 aa11.2□□□□□ -0.62
SCARNA18.2-201ENST00000516882 MLH3Q9UHC1 1453 aa11.19□□□□□ -0.62
SCARNA18.2-201ENST00000516882 KIAA1107Q9UPP5 1409 aa11.19□□□□□ -0.62
SCARNA18.2-201ENST00000516882 TRAPPC8Q9Y2L5 1435 aa11.19□□□□□ -0.62
SCARNA18.2-201ENST00000516882 SIGLEC1Q9BZZ2 1709 aa11.19□□□□□ -0.62
SCARNA18.2-201ENST00000516882 ABCA6Q8N139 1617 aa11.19□□□□□ -0.62
SCARNA18.2-201ENST00000516882 DIP2CQ9Y2E4 1556 aa11.19□□□□□ -0.62
SCARNA18.2-201ENST00000516882 ARHGEF12Q9NZN5 1544 aa11.19□□□□□ -0.62
SCARNA18.2-201ENST00000516882 NCOA2Q15596 1464 aa11.19□□□□□ -0.62
SCARNA18.2-201ENST00000516882 LRRC9Q6ZRR7 1453 aa11.19□□□□□ -0.62
SCARNA18.2-201ENST00000516882 HNRNPMP52272 730 aaKnown RBP eCLIP11.18□□□□□ -0.62
SCARNA18.2-201ENST00000516882 MLECQ14165 292 aa11.18□□□□□ -0.62
SCARNA18.2-201ENST00000516882 PTPRMP28827 1452 aa11.18□□□□□ -0.62
SCARNA18.2-201ENST00000516882 SETD1BQ9UPS6 1966 aaKnown RBP11.17□□□□□ -0.62
SCARNA18.2-201ENST00000516882 SPAG9O60271 1321 aaKnown RBP11.17□□□□□ -0.62
SCARNA18.2-201ENST00000516882 REREQ9P2R6 1566 aa11.17□□□□□ -0.62
SCARNA18.2-201ENST00000516882 ADGBQ8N7X0 1667 aa11.16□□□□□ -0.62
SCARNA18.2-201ENST00000516882 ATP7AQ04656 1500 aa11.15□□□□□ -0.62
SCARNA18.2-201ENST00000516882 ESF1Q9H501 851 aaKnown RBP11.15□□□□□ -0.62
SCARNA18.2-201ENST00000516882 RSPH4AQ5TD94 716 aa11.14□□□□□ -0.63
SCARNA18.2-201ENST00000516882 INO80Q9ULG1 1556 aaPredicted RBP11.14□□□□□ -0.63
SCARNA18.2-201ENST00000516882 CAMSAP2Q08AD1 1489 aa11.13□□□□□ -0.63
SCARNA18.2-201ENST00000516882 PLPPR3Q6T4P5 718 aa11.13□□□□□ -0.63
SCARNA18.2-201ENST00000516882 ZNF644Q9H582 1327 aaPredicted RBP11.12□□□□□ -0.63
SCARNA18.2-201ENST00000516882 KANK4Q5T7N3 995 aaPredicted RBP11.12□□□□□ -0.63
SCARNA18.2-201ENST00000516882 AGLP35573 1532 aa11.12□□□□□ -0.63
SCARNA18.2-201ENST00000516882 CCDC141Q6ZP82 1450 aa11.11□□□□□ -0.63
SCARNA18.2-201ENST00000516882 MYOM3Q5VTT5 1437 aa11.1□□□□□ -0.63
SCARNA18.2-201ENST00000516882 TSPY4P0CV99 314 aa11.1□□□□□ -0.63
SCARNA18.2-201ENST00000516882 TSPY10P0CW01 314 aa11.1□□□□□ -0.63
SCARNA18.2-201ENST00000516882 MBD5Q9P267 1494 aa11.1□□□□□ -0.63
SCARNA18.2-201ENST00000516882 ARHGEF5Q12774 1597 aa11.1□□□□□ -0.63
SCARNA18.2-201ENST00000516882 RTEL1-TNFRSF6BF6WH68 1400 aa11.09□□□□□ -0.63
SCARNA18.2-201ENST00000516882 MIA2Q96PC5 1412 aa11.09□□□□□ -0.63
SCARNA18.2-201ENST00000516882 A2MP01023 1474 aa11.09□□□□□ -0.63
SCARNA18.2-201ENST00000516882 C3P01024 1663 aa11.08□□□□□ -0.64
SCARNA18.2-201ENST00000516882 PREX1Q8TCU6 1659 aa11.08□□□□□ -0.64
SCARNA18.2-201ENST00000516882 PTPN23Q9H3S7 1636 aa11.07□□□□□ -0.64
SCARNA18.2-201ENST00000516882 CNTLNQ9NXG0 1405 aa11.07□□□□□ -0.64
SCARNA18.2-201ENST00000516882 MROH2AA6NES4 1674 aa11.07□□□□□ -0.64
SCARNA18.2-201ENST00000516882 PLXNC1O60486 1568 aa11.07□□□□□ -0.64
SCARNA18.2-201ENST00000516882 CLTCQ00610 1675 aaKnown RBP11.06□□□□□ -0.64
SCARNA18.2-201ENST00000516882 CROCC2H7BZ55 1655 aa11.04□□□□□ -0.64
SCARNA18.2-201ENST00000516882 MAST1Q9Y2H9 1570 aa11.04□□□□□ -0.64
SCARNA18.2-201ENST00000516882 GGT6Q6P531 493 aa11.04□□□□□ -0.64
SCARNA18.2-201ENST00000516882 DHX29Q7Z478 1369 aaKnown RBP11.03□□□□□ -0.64
SCARNA18.2-201ENST00000516882 CEBPAP49715 358 aaPredicted RBP11.03□□□□□ -0.64
SCARNA18.2-201ENST00000516882 PPP6R1Q9UPN7 881 aa11.03□□□□□ -0.64
SCARNA18.2-201ENST00000516882 CFAP65Q6ZU64 1925 aaKnown RBP11.03□□□□□ -0.64
SCARNA18.2-201ENST00000516882 LMTK3Q96Q04 1460 aa11.02□□□□□ -0.65
SCARNA18.2-201ENST00000516882 FGD6Q6ZV73 1430 aa11.01□□□□□ -0.65
SCARNA18.2-201ENST00000516882 KIF3BO15066 747 aa11.01□□□□□ -0.65
SCARNA18.2-201ENST00000516882 DNMT1P26358 1616 aaKnown RBP11.01□□□□□ -0.65
SCARNA18.2-201ENST00000516882 UHRF1BP1Q6BDS2 1440 aa11.01□□□□□ -0.65
SCARNA18.2-201ENST00000516882 EIF2AK4Q9P2K8 1649 aaKnown RBP11□□□□□ -0.65
SCARNA18.2-201ENST00000516882 ZMYM3Q14202 1370 aa10.99□□□□□ -0.65
SCARNA18.2-201ENST00000516882 SHANK2Q9UPX8 1470 aa10.99□□□□□ -0.65
SCARNA18.2-201ENST00000516882 FAM135AQ9P2D6 1515 aa10.99□□□□□ -0.65
SCARNA18.2-201ENST00000516882 TCOF1Q13428 1488 aaKnown RBP10.98□□□□□ -0.65
SCARNA18.2-201ENST00000516882 DUOX2Q9NRD8 1548 aa10.98□□□□□ -0.65
SCARNA18.2-201ENST00000516882 HSPA2P54652 639 aa10.97□□□□□ -0.65
SCARNA18.2-201ENST00000516882 FAM50AQ14320 339 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms