RNA–Protein interactions for RNA: ENST00000516882.1

SCARNA18.2-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 84 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.2-201ENST00000516882 NISCHQ9Y2I1 1504 aa17.34■□□□□ 0.37
SCARNA18.2-201ENST00000516882 CCDC180Q9P1Z9 1646 aa15.54■□□□□ 0.08
SCARNA18.2-201ENST00000516882 ABCC9O60706 1549 aa15.22■□□□□ 0.03
SCARNA18.2-201ENST00000516882 RB1CC1Q8TDY2 1594 aa14.66□□□□□ -0.06
SCARNA18.2-201ENST00000516882 NACADO15069 1562 aa14.6□□□□□ -0.07
SCARNA18.2-201ENST00000516882 DCAF8L2P0C7V8 631 aa14.59□□□□□ -0.07
SCARNA18.2-201ENST00000516882 MYO15BQ96JP2 1530 aa14.45□□□□□ -0.1
SCARNA18.2-201ENST00000516882 ZCCHC6Q5VYS8 1495 aaKnown RBP14.41□□□□□ -0.1
SCARNA18.2-201ENST00000516882 UNC13AQ9UPW8 1703 aa14.38□□□□□ -0.11
SCARNA18.2-201ENST00000516882 DCAF1Q9Y4B6 1507 aa14.35□□□□□ -0.11
SCARNA18.2-201ENST00000516882 PABPN1Q86U42 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
SCARNA18.2-201ENST00000516882 BICRAQ9NZM4 1560 aa14.14□□□□□ -0.15
SCARNA18.2-201ENST00000516882 SCRIBQ14160 1630 aa14.13□□□□□ -0.15
SCARNA18.2-201ENST00000516882 SHROOM4Q9ULL8 1493 aa14.03□□□□□ -0.16
SCARNA18.2-201ENST00000516882 DNAJC5BQ9UF47 199 aa13.98□□□□□ -0.17
SCARNA18.2-201ENST00000516882 EIF4G1Q04637 1599 aaKnown RBP13.82□□□□□ -0.2
SCARNA18.2-201ENST00000516882 CC2D2AQ9P2K1 1620 aa13.8□□□□□ -0.2
SCARNA18.2-201ENST00000516882 CECR2Q9BXF3 1484 aa13.7□□□□□ -0.22
SCARNA18.2-201ENST00000516882 SMARCA4P51532 1647 aa13.5□□□□□ -0.25
SCARNA18.2-201ENST00000516882 BAZ1AQ9NRL2 1556 aaPredicted RBP13.49□□□□□ -0.25
SCARNA18.2-201ENST00000516882 SMARCA2P51531 1590 aa13.45□□□□□ -0.26
SCARNA18.2-201ENST00000516882 NCAPD3P42695 1498 aa13.42□□□□□ -0.26
SCARNA18.2-201ENST00000516882 ATAD2BQ9ULI0 1458 aa13.42□□□□□ -0.26
SCARNA18.2-201ENST00000516882 HMGXB3Q12766 1538 aa13.38□□□□□ -0.27
SCARNA18.2-201ENST00000516882 PEG3Q9GZU2 1588 aa13.35□□□□□ -0.27
SCARNA18.2-201ENST00000516882 BAZ1BQ9UIG0 1483 aaKnown RBP13.35□□□□□ -0.27
SCARNA18.2-201ENST00000516882 MROH2BQ7Z745 1585 aa13.34□□□□□ -0.27
SCARNA18.2-201ENST00000516882 WIZO95785 1651 aa13.25□□□□□ -0.29
SCARNA18.2-201ENST00000516882 ERCC6Q03468 1493 aa13.18□□□□□ -0.3
SCARNA18.2-201ENST00000516882 LAMC3Q9Y6N6 1575 aa13.15□□□□□ -0.3
SCARNA18.2-201ENST00000516882 RSF1Q96T23 1441 aaPredicted RBP13.14□□□□□ -0.31
SCARNA18.2-201ENST00000516882 NESP48681 1621 aa13.13□□□□□ -0.31
SCARNA18.2-201ENST00000516882 TOP2AP11388 1531 aaKnown RBP13.08□□□□□ -0.31
SCARNA18.2-201ENST00000516882 KIF21AQ7Z4S6 1674 aa13.06□□□□□ -0.32
SCARNA18.2-201ENST00000516882 CUX2O14529 1486 aa13.05□□□□□ -0.32
SCARNA18.2-201ENST00000516882 PDS5BQ9NTI5 1447 aa13.05□□□□□ -0.32
SCARNA18.2-201ENST00000516882 CADPSQ9ULU8 1353 aa13.04□□□□□ -0.32
SCARNA18.2-201ENST00000516882 PRDM2Q13029 1718 aa12.99□□□□□ -0.33
SCARNA18.2-201ENST00000516882 THOC2Q8NI27 1593 aaKnown RBP12.98□□□□□ -0.33
SCARNA18.2-201ENST00000516882 CFTRP13569 1480 aa12.93□□□□□ -0.34
SCARNA18.2-201ENST00000516882 CEP164Q9UPV0 1460 aa12.91□□□□□ -0.34
SCARNA18.2-201ENST00000516882 CCDC88BA6NC98 1476 aa12.91□□□□□ -0.34
SCARNA18.2-201ENST00000516882 FANCD2Q9BXW9 1451 aa12.9□□□□□ -0.34
SCARNA18.2-201ENST00000516882 MRC2Q9UBG0 1479 aa12.9□□□□□ -0.34
SCARNA18.2-201ENST00000516882 WDR62O43379 1518 aa12.85□□□□□ -0.35
SCARNA18.2-201ENST00000516882 SUPT5HO00267 1087 aaKnown RBP12.79□□□□□ -0.36
SCARNA18.2-201ENST00000516882 URB2Q14146 1524 aaKnown RBP12.75□□□□□ -0.37
SCARNA18.2-201ENST00000516882 DNAJC5Q9H3Z4 198 aa12.73□□□□□ -0.37
SCARNA18.2-201ENST00000516882 ABCC8Q09428 1581 aa12.73□□□□□ -0.37
SCARNA18.2-201ENST00000516882 DNMBPQ6XZF7 1577 aa12.69□□□□□ -0.38
SCARNA18.2-201ENST00000516882 TOPBP1Q92547 1522 aa12.68□□□□□ -0.38
SCARNA18.2-201ENST00000516882 IFT140Q96RY7 1462 aa12.63□□□□□ -0.39
SCARNA18.2-201ENST00000516882 TARBP1Q13395 1621 aaKnown RBP12.55□□□□□ -0.4
SCARNA18.2-201ENST00000516882 POLA1P09884 1462 aaPredicted RBP12.55□□□□□ -0.4
SCARNA18.2-201ENST00000516882 ZNF608Q9ULD9 1512 aaPredicted RBP12.55□□□□□ -0.4
SCARNA18.2-201ENST00000516882 EIF4G3O43432 1585 aaKnown RBP12.55□□□□□ -0.4
SCARNA18.2-201ENST00000516882 CUX1P39880 1505 aa12.53□□□□□ -0.4
SCARNA18.2-201ENST00000516882 FGD5Q6ZNL6 1462 aa12.53□□□□□ -0.4
SCARNA18.2-201ENST00000516882 SOGA1O94964 1423 aa12.52□□□□□ -0.41
SCARNA18.2-201ENST00000516882 OSCARQ8IYS5 282 aa12.51□□□□□ -0.41
SCARNA18.2-201ENST00000516882 WDR97A6NE52 1622 aa12.5□□□□□ -0.41
SCARNA18.2-201ENST00000516882 RAD54L2Q9Y4B4 1467 aa12.49□□□□□ -0.41
SCARNA18.2-201ENST00000516882 AQRO60306 1485 aaKnown RBP eCLIP12.47□□□□□ -0.41
SCARNA18.2-201ENST00000516882 CHD1O14646 1710 aa12.47□□□□□ -0.41
SCARNA18.2-201ENST00000516882 BIVM-ERCC5R4GMW8 1640 aa12.45□□□□□ -0.42
SCARNA18.2-201ENST00000516882 PBRM1Q86U86 1689 aa12.44□□□□□ -0.42
SCARNA18.2-201ENST00000516882 WRNQ14191 1432 aaPredicted RBP eCLIP12.44□□□□□ -0.42
SCARNA18.2-201ENST00000516882 TOP2BQ02880 1626 aa12.44□□□□□ -0.42
SCARNA18.2-201ENST00000516882 TDRD9Q8NDG6 1382 aaKnown RBP12.43□□□□□ -0.42
SCARNA18.2-201ENST00000516882 FBLN2P98095 1184 aa12.41□□□□□ -0.42
SCARNA18.2-201ENST00000516882 SYNJ1O43426 1573 aa12.4□□□□□ -0.42
SCARNA18.2-201ENST00000516882 ABCA10Q8WWZ4 1543 aa12.39□□□□□ -0.43
SCARNA18.2-201ENST00000516882 GRIN2BQ13224 1484 aa12.39□□□□□ -0.43
SCARNA18.2-201ENST00000516882 GAPVD1Q14C86 1478 aa12.39□□□□□ -0.43
SCARNA18.2-201ENST00000516882 SNAPC4Q5SXM2 1469 aa12.38□□□□□ -0.43
SCARNA18.2-201ENST00000516882 MAGI1Q96QZ7 1491 aaPredicted RBP12.38□□□□□ -0.43
SCARNA18.2-201ENST00000516882 ABCA5Q8WWZ7 1642 aa12.37□□□□□ -0.43
SCARNA18.2-201ENST00000516882 CHMP7Q8WUX9 453 aaPredicted RBP12.35□□□□□ -0.43
SCARNA18.2-201ENST00000516882 TRIM41Q8WV44 630 aa12.32□□□□□ -0.44
SCARNA18.2-201ENST00000516882 RIMBP3CA6NJZ7 1639 aa12.32□□□□□ -0.44
SCARNA18.2-201ENST00000516882 RIMBP3BA6NNM3 1639 aa12.32□□□□□ -0.44
SCARNA18.2-201ENST00000516882 RIMBP3Q9UFD9 1639 aa12.32□□□□□ -0.44
SCARNA18.2-201ENST00000516882 SYNJ2O15056 1496 aa12.32□□□□□ -0.44
SCARNA18.2-201ENST00000516882 ARHGEF11O15085 1522 aa12.28□□□□□ -0.44
SCARNA18.2-201ENST00000516882 ERICH3Q5RHP9 1530 aa12.27□□□□□ -0.44
SCARNA18.2-201ENST00000516882 ADAMTS12P58397 1594 aa12.26□□□□□ -0.45
SCARNA18.2-201ENST00000516882 CLASP1Q7Z460 1538 aa12.23□□□□□ -0.45
SCARNA18.2-201ENST00000516882 GRIN2AQ12879 1464 aa12.22□□□□□ -0.45
SCARNA18.2-201ENST00000516882 FHAD1B1AJZ9 1412 aa12.22□□□□□ -0.45
SCARNA18.2-201ENST00000516882 KIF27Q86VH2 1401 aa12.2□□□□□ -0.46
SCARNA18.2-201ENST00000516882 CYB5RLQ6IPT4 315 aa12.19□□□□□ -0.46
SCARNA18.2-201ENST00000516882 CUL7Q14999 1698 aa12.19□□□□□ -0.46
SCARNA18.2-201ENST00000516882 CEP170Q5SW79 1584 aa12.16□□□□□ -0.46
SCARNA18.2-201ENST00000516882 NUP160Q12769 1436 aa12.15□□□□□ -0.46
SCARNA18.2-201ENST00000516882 ARAP1Q96P48 1450 aa12.14□□□□□ -0.47
SCARNA18.2-201ENST00000516882 IGF1RP08069 1367 aa12.11□□□□□ -0.47
SCARNA18.2-201ENST00000516882 SHROOM2Q13796 1616 aa12.11□□□□□ -0.47
SCARNA18.2-201ENST00000516882 RUSC2Q8N2Y8 1516 aa12.08□□□□□ -0.48
SCARNA18.2-201ENST00000516882 CARMIL1Q5VZK9 1371 aa12.07□□□□□ -0.48
SCARNA18.2-201ENST00000516882 JPH4Q96JJ6 628 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms