RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 FRMPD1Q5SYB0 1578 aa30.63■■■□□ 2.49
LMNA-225ENST00000515824 EHBP1L1Q8N3D4 1523 aa30.6■■■□□ 2.49
LMNA-225ENST00000515824 CCNB3Q8WWL7 1395 aa30.6■■■□□ 2.49
LMNA-225ENST00000515824 RICTORQ6R327 1708 aa30.59■■■□□ 2.49
LMNA-225ENST00000515824 CDC42BPBQ9Y5S2 1711 aa30.59■■■□□ 2.49
LMNA-225ENST00000515824 PREX2Q70Z35 1606 aa30.59■■■□□ 2.49
LMNA-225ENST00000515824 GPATCH8Q9UKJ3 1502 aaKnown RBP30.59■■■□□ 2.49
LMNA-225ENST00000515824 POGZQ7Z3K3 1410 aa30.58■■■□□ 2.49
LMNA-225ENST00000515824 CFDP1Q9UEE9 299 aaPredicted RBP30.57■■■□□ 2.48
LMNA-225ENST00000515824 ZNF777Q9ULD5 760 aaPredicted RBP30.57■■■□□ 2.48
LMNA-225ENST00000515824 TIAM1Q13009 1591 aa30.55■■■□□ 2.48
LMNA-225ENST00000515824 CDC42BPAQ5VT25 1732 aa30.55■■■□□ 2.48
LMNA-225ENST00000515824 MAGI2Q86UL8 1455 aa30.53■■■□□ 2.48
LMNA-225ENST00000515824 APLP2Q06481 763 aa30.53■■■□□ 2.48
LMNA-225ENST00000515824 AFAP1Q8N556 730 aa30.53■■■□□ 2.48
LMNA-225ENST00000515824 ZMYM4Q5VZL5 1548 aa30.52■■■□□ 2.48
LMNA-225ENST00000515824 ZNF518AQ6AHZ1 1483 aa30.51■■■□□ 2.48
LMNA-225ENST00000515824 MAP3K1Q13233 1512 aa30.51■■■□□ 2.47
LMNA-225ENST00000515824 LRRC9Q6ZRR7 1453 aa30.48■■■□□ 2.47
LMNA-225ENST00000515824 ARID4BQ4LE39 1312 aaPredicted RBP30.47■■■□□ 2.47
LMNA-225ENST00000515824 MYT1LQ9UL68 1186 aa30.47■■■□□ 2.47
LMNA-225ENST00000515824 ABCC1P33527 1531 aa30.46■■■□□ 2.47
LMNA-225ENST00000515824 ZFYVE16Q7Z3T8 1539 aa30.46■■■□□ 2.47
LMNA-225ENST00000515824 KANK4Q5T7N3 995 aaPredicted RBP30.45■■■□□ 2.47
LMNA-225ENST00000515824 ARHGEF40Q8TER5 1519 aa30.45■■■□□ 2.47
LMNA-225ENST00000515824 YEATS2Q9ULM3 1422 aa30.45■■■□□ 2.46
LMNA-225ENST00000515824 NCOA2Q15596 1464 aa30.44■■■□□ 2.46
LMNA-225ENST00000515824 ARHGEF12Q9NZN5 1544 aa30.44■■■□□ 2.46
LMNA-225ENST00000515824 SUPT6HQ7KZ85 1726 aaKnown RBP30.44■■■□□ 2.46
LMNA-225ENST00000515824 TRAPPC8Q9Y2L5 1435 aa30.43■■■□□ 2.46
LMNA-225ENST00000515824 HNRNPMP52272 730 aaKnown RBP eCLIP30.42■■■□□ 2.46
LMNA-225ENST00000515824 PLEKHH2Q8IVE3 1493 aa30.41■■■□□ 2.46
LMNA-225ENST00000515824 SAMD9LQ8IVG5 1584 aa30.41■■■□□ 2.46
LMNA-225ENST00000515824 KIAA1107Q9UPP5 1409 aa30.4■■■□□ 2.46
LMNA-225ENST00000515824 KDM5CP41229 1560 aa30.4■■■□□ 2.46
LMNA-225ENST00000515824 ITSN2Q9NZM3 1697 aa30.37■■■□□ 2.45
LMNA-225ENST00000515824 ATP10AO60312 1499 aa30.37■■■□□ 2.45
LMNA-225ENST00000515824 MLH3Q9UHC1 1453 aa30.36■■■□□ 2.45
LMNA-225ENST00000515824 ZNF644Q9H582 1327 aaPredicted RBP30.35■■■□□ 2.45
LMNA-225ENST00000515824 SYCP2Q9BX26 1530 aa30.34■■■□□ 2.45
LMNA-225ENST00000515824 HECW2Q9P2P5 1572 aa30.32■■■□□ 2.44
LMNA-225ENST00000515824 C9orf84Q5VXU9 1444 aa30.31■■■□□ 2.44
LMNA-225ENST00000515824 SPAG9O60271 1321 aaKnown RBP30.3■■■□□ 2.44
LMNA-225ENST00000515824 BCORL1Q5H9F3 1711 aa30.25■■■□□ 2.43
LMNA-225ENST00000515824 MLECQ14165 292 aa30.24■■■□□ 2.43
LMNA-225ENST00000515824 RSPH4AQ5TD94 716 aa30.24■■■□□ 2.43
LMNA-225ENST00000515824 MBD5Q9P267 1494 aa30.23■■■□□ 2.43
LMNA-225ENST00000515824 ADAMTSL3P82987 1691 aa30.23■■■□□ 2.43
LMNA-225ENST00000515824 DIP2CQ9Y2E4 1556 aa30.22■■■□□ 2.43
LMNA-225ENST00000515824 CAMSAP2Q08AD1 1489 aa30.2■■■□□ 2.43
LMNA-225ENST00000515824 MYOM3Q5VTT5 1437 aa30.2■■■□□ 2.42
LMNA-225ENST00000515824 KIDINS220Q9ULH0 1771 aa30.19■■■□□ 2.42
LMNA-225ENST00000515824 MIA2Q96PC5 1412 aa30.19■■■□□ 2.42
LMNA-225ENST00000515824 ABCA6Q8N139 1617 aa30.18■■■□□ 2.42
LMNA-225ENST00000515824 SIGLEC1Q9BZZ2 1709 aa30.17■■■□□ 2.42
LMNA-225ENST00000515824 REREQ9P2R6 1566 aa30.15■■■□□ 2.42
LMNA-225ENST00000515824 ATP7AQ04656 1500 aa30.15■■■□□ 2.42
LMNA-225ENST00000515824 PTPRMP28827 1452 aa30.13■■■□□ 2.41
LMNA-225ENST00000515824 CCDC141Q6ZP82 1450 aa30.13■■■□□ 2.41
LMNA-225ENST00000515824 TSPY4P0CV99 314 aa30.13■■■□□ 2.41
LMNA-225ENST00000515824 TSPY10P0CW01 314 aa30.13■■■□□ 2.41
LMNA-225ENST00000515824 MADDQ8WXG6 1647 aa30.13■■■□□ 2.41
LMNA-225ENST00000515824 RTEL1-TNFRSF6BF6WH68 1400 aa30.12■■■□□ 2.41
LMNA-225ENST00000515824 INO80Q9ULG1 1556 aaPredicted RBP30.1■■■□□ 2.41
LMNA-225ENST00000515824 AGLP35573 1532 aa30.09■■■□□ 2.41
LMNA-225ENST00000515824 ARHGEF5Q12774 1597 aa30.07■■■□□ 2.4
LMNA-225ENST00000515824 A2MP01023 1474 aa30.06■■■□□ 2.4
LMNA-225ENST00000515824 ESF1Q9H501 851 aaKnown RBP30.03■■■□□ 2.4
LMNA-225ENST00000515824 RIMS1Q86UR5 1692 aaKnown RBP30.03■■■□□ 2.4
LMNA-225ENST00000515824 PLPPR3Q6T4P5 718 aa30.01■■■□□ 2.39
LMNA-225ENST00000515824 FGD6Q6ZV73 1430 aa30.01■■■□□ 2.39
LMNA-225ENST00000515824 FER1L4A9Z1Z3 1794 aa29.98■■■□□ 2.39
LMNA-225ENST00000515824 DHX29Q7Z478 1369 aaKnown RBP29.98■■■□□ 2.39
LMNA-225ENST00000515824 PTPN23Q9H3S7 1636 aa29.96■■■□□ 2.39
LMNA-225ENST00000515824 ADGBQ8N7X0 1667 aa29.96■■■□□ 2.39
LMNA-225ENST00000515824 PLXNC1O60486 1568 aa29.95■■■□□ 2.39
LMNA-225ENST00000515824 GGT6Q6P531 493 aa29.93■■■□□ 2.38
LMNA-225ENST00000515824 TCOF1Q13428 1488 aaKnown RBP29.93■■■□□ 2.38
LMNA-225ENST00000515824 CEBPAP49715 358 aaPredicted RBP29.9■■■□□ 2.38
LMNA-225ENST00000515824 MAST1Q9Y2H9 1570 aa29.9■■■□□ 2.38
LMNA-225ENST00000515824 PPARGC1BQ86YN6 1023 aaKnown RBP29.89■■■□□ 2.38
LMNA-225ENST00000515824 PPP6R1Q9UPN7 881 aa29.89■■■□□ 2.38
LMNA-225ENST00000515824 ABCC5O15440 1437 aa29.88■■■□□ 2.37
LMNA-225ENST00000515824 CNTLNQ9NXG0 1405 aa29.88■■■□□ 2.37
LMNA-225ENST00000515824 KIF3BO15066 747 aa29.88■■■□□ 2.37
LMNA-225ENST00000515824 FAM50AQ14320 339 aaKnown RBP29.88■■■□□ 2.37
LMNA-225ENST00000515824 DAPK1P53355 1430 aa29.85■■■□□ 2.37
LMNA-225ENST00000515824 SHANK2Q9UPX8 1470 aa29.82■■■□□ 2.36
LMNA-225ENST00000515824 DNMT1P26358 1616 aaKnown RBP29.8■■■□□ 2.36
LMNA-225ENST00000515824 ZMYM3Q14202 1370 aa29.78■■■□□ 2.36
LMNA-225ENST00000515824 RRP7BPQ9NSQ0 103 aa29.78■■■□□ 2.36
LMNA-225ENST00000515824 CHIC2Q9UKJ5 165 aa29.78■■■□□ 2.36
LMNA-225ENST00000515824 KIF15Q9NS87 1388 aa29.75■■■□□ 2.35
LMNA-225ENST00000515824 DUOX2Q9NRD8 1548 aa29.74■■■□□ 2.35
LMNA-225ENST00000515824 ANKRD30AQ9BXX3 1397 aa29.74■■■□□ 2.35
LMNA-225ENST00000515824 LMTK3Q96Q04 1460 aa29.74■■■□□ 2.35
LMNA-225ENST00000515824 CROCC2H7BZ55 1655 aa29.73■■■□□ 2.35
LMNA-225ENST00000515824 C3P01024 1663 aa29.72■■■□□ 2.35
LMNA-225ENST00000515824 WASHC2CQ9Y4E1 1318 aa29.71■■■□□ 2.35
LMNA-225ENST00000515824 MROH2AA6NES4 1674 aa29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms