RNA–Protein interactions for RNA: ENST00000515764.2

SMIM20-203, Transcript of small integral membrane protein 20, humanhuman

TSL 5

Gene SMIM20, Length 773 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-203ENST00000515764 ABCA9Q8IUA7 1624 aa13.35□□□□□ -0.27
SMIM20-203ENST00000515764 COL17A1Q9UMD9 1497 aaPredicted RBP13.35□□□□□ -0.27
SMIM20-203ENST00000515764 P3H3Q8IVL6 736 aa13.31□□□□□ -0.28
SMIM20-203ENST00000515764 PHLDB1Q86UU1 1377 aa13.31□□□□□ -0.28
SMIM20-203ENST00000515764 NUP153P49790 1475 aaKnown RBP13.3□□□□□ -0.28
SMIM20-203ENST00000515764 ARAP3Q8WWN8 1544 aa13.3□□□□□ -0.28
SMIM20-203ENST00000515764 KDM4FA0A1W2PPD8 638 aa13.3□□□□□ -0.28
SMIM20-203ENST00000515764 KCNH8Q96L42 1107 aa13.3□□□□□ -0.28
SMIM20-203ENST00000515764 FHOD3Q2V2M9 1422 aa13.28□□□□□ -0.28
SMIM20-203ENST00000515764 ADGRL1O94910 1474 aa13.28□□□□□ -0.28
SMIM20-203ENST00000515764 NEO1Q92859 1461 aa13.26□□□□□ -0.29
SMIM20-203ENST00000515764 CFAP74Q9C0B2 1584 aa13.24□□□□□ -0.29
SMIM20-203ENST00000515764 ARID3CA6NKF2 412 aa13.22□□□□□ -0.29
SMIM20-203ENST00000515764 FMN1Q68DA7 1419 aa13.22□□□□□ -0.29
SMIM20-203ENST00000515764 HECW1Q76N89 1606 aa13.21□□□□□ -0.29
SMIM20-203ENST00000515764 FKBP8Q14318 412 aa13.21□□□□□ -0.29
SMIM20-203ENST00000515764 PLEKHD1A6NEE1 506 aa13.2□□□□□ -0.3
SMIM20-203ENST00000515764 RANGAP1P46060 587 aaPredicted RBP13.19□□□□□ -0.3
SMIM20-203ENST00000515764 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMIM20-203ENST00000515764 ARHGAP35Q9NRY4 1499 aa13.18□□□□□ -0.3
SMIM20-203ENST00000515764 UBTFP17480 764 aaKnown RBP13.18□□□□□ -0.3
SMIM20-203ENST00000515764 FRMPD1Q5SYB0 1578 aa13.18□□□□□ -0.3
SMIM20-203ENST00000515764 RICTORQ6R327 1708 aa13.16□□□□□ -0.3
SMIM20-203ENST00000515764 TTC37Q6PGP7 1564 aa13.16□□□□□ -0.3
SMIM20-203ENST00000515764 CDK13Q14004 1512 aaKnown RBP13.15□□□□□ -0.3
SMIM20-203ENST00000515764 FANCAO15360 1455 aa13.15□□□□□ -0.3
SMIM20-203ENST00000515764 MYO5CQ9NQX4 1742 aa13.14□□□□□ -0.31
SMIM20-203ENST00000515764 DENND4BO75064 1496 aaPredicted RBP13.13□□□□□ -0.31
SMIM20-203ENST00000515764 ZMYM4Q5VZL5 1548 aa13.13□□□□□ -0.31
SMIM20-203ENST00000515764 ARHGEF40Q8TER5 1519 aa13.13□□□□□ -0.31
SMIM20-203ENST00000515764 AKNAQ7Z591 1439 aa13.13□□□□□ -0.31
SMIM20-203ENST00000515764 ADAMTSL3P82987 1691 aa13.12□□□□□ -0.31
SMIM20-203ENST00000515764 KIF14Q15058 1648 aa13.12□□□□□ -0.31
SMIM20-203ENST00000515764 LRRIQ1Q96JM4 1722 aa13.11□□□□□ -0.31
SMIM20-203ENST00000515764 CDK11AQ9UQ88 783 aaPredicted RBP13.11□□□□□ -0.31
SMIM20-203ENST00000515764 BCORL1Q5H9F3 1711 aa13.1□□□□□ -0.31
SMIM20-203ENST00000515764 RAPGEF3O95398 923 aa13.1□□□□□ -0.31
SMIM20-203ENST00000515764 PLCH2O75038 1416 aa13.1□□□□□ -0.31
SMIM20-203ENST00000515764 MAGI2Q86UL8 1455 aa13.1□□□□□ -0.31
SMIM20-203ENST00000515764 RBM42Q9BTD8 480 aaKnown RBP13.09□□□□□ -0.31
SMIM20-203ENST00000515764 HECW2Q9P2P5 1572 aa13.09□□□□□ -0.31
SMIM20-203ENST00000515764 CCDC18Q5T9S5 1454 aa13.09□□□□□ -0.31
SMIM20-203ENST00000515764 CLIP1P30622 1438 aa13.08□□□□□ -0.32
SMIM20-203ENST00000515764 TROQ12816 1431 aaPredicted RBP13.07□□□□□ -0.32
SMIM20-203ENST00000515764 CASKIN1Q8WXD9 1431 aa13.06□□□□□ -0.32
SMIM20-203ENST00000515764 SPDYE2BA6NHP3 402 aa13.06□□□□□ -0.32
SMIM20-203ENST00000515764 SPDYE6P0CI01 402 aa13.06□□□□□ -0.32
SMIM20-203ENST00000515764 SPDYE2Q495Y8 402 aa13.06□□□□□ -0.32
SMIM20-203ENST00000515764 ZFYVE16Q7Z3T8 1539 aa13.06□□□□□ -0.32
SMIM20-203ENST00000515764 PCF11O94913 1555 aaKnown RBP13.06□□□□□ -0.32
SMIM20-203ENST00000515764 POGZQ7Z3K3 1410 aa13.05□□□□□ -0.32
SMIM20-203ENST00000515764 FYCO1Q9BQS8 1478 aa13.04□□□□□ -0.32
SMIM20-203ENST00000515764 MADDQ8WXG6 1647 aa13.04□□□□□ -0.32
SMIM20-203ENST00000515764 PTPRMP28827 1452 aa13.04□□□□□ -0.32
SMIM20-203ENST00000515764 ATP1B4Q9UN42 357 aaPredicted RBP13.03□□□□□ -0.32
SMIM20-203ENST00000515764 PREX2Q70Z35 1606 aa13.02□□□□□ -0.32
SMIM20-203ENST00000515764 CDC42BPBQ9Y5S2 1711 aa13.02□□□□□ -0.32
SMIM20-203ENST00000515764 EFCAB2Q5VUJ9 269 aa13.02□□□□□ -0.33
SMIM20-203ENST00000515764 SCAPERQ9BY12 1400 aa13.02□□□□□ -0.33
SMIM20-203ENST00000515764 ARHGAP5Q13017 1502 aa13.01□□□□□ -0.33
SMIM20-203ENST00000515764 KDM5CP41229 1560 aa13.01□□□□□ -0.33
SMIM20-203ENST00000515764 RIMS1Q86UR5 1692 aaKnown RBP13□□□□□ -0.33
SMIM20-203ENST00000515764 ZNF518AQ6AHZ1 1483 aa13□□□□□ -0.33
SMIM20-203ENST00000515764 SSUH2Q9Y2M2 353 aa13□□□□□ -0.33
SMIM20-203ENST00000515764 ARID4BQ4LE39 1312 aaPredicted RBP12.99□□□□□ -0.33
SMIM20-203ENST00000515764 SPDYE4A6NLX3 237 aa12.99□□□□□ -0.33
SMIM20-203ENST00000515764 ZNF692Q9BU19 519 aaPredicted RBP12.99□□□□□ -0.33
SMIM20-203ENST00000515764 CDC42BPAQ5VT25 1732 aa12.99□□□□□ -0.33
SMIM20-203ENST00000515764 SIGLEC1Q9BZZ2 1709 aa12.99□□□□□ -0.33
SMIM20-203ENST00000515764 YEATS2Q9ULM3 1422 aa12.98□□□□□ -0.33
SMIM20-203ENST00000515764 FER1L4A9Z1Z3 1794 aa12.98□□□□□ -0.33
SMIM20-203ENST00000515764 REREQ9P2R6 1566 aa12.97□□□□□ -0.33
SMIM20-203ENST00000515764 ATP10AO60312 1499 aa12.97□□□□□ -0.33
SMIM20-203ENST00000515764 C9orf84Q5VXU9 1444 aa12.96□□□□□ -0.33
SMIM20-203ENST00000515764 ITSN2Q9NZM3 1697 aa12.96□□□□□ -0.33
SMIM20-203ENST00000515764 ABCC1P33527 1531 aa12.96□□□□□ -0.33
SMIM20-203ENST00000515764 MLH3Q9UHC1 1453 aa12.94□□□□□ -0.34
SMIM20-203ENST00000515764 AKT1S1Q96B36 256 aa12.94□□□□□ -0.34
SMIM20-203ENST00000515764 ARHGEF12Q9NZN5 1544 aa12.93□□□□□ -0.34
SMIM20-203ENST00000515764 DIP2CQ9Y2E4 1556 aa12.93□□□□□ -0.34
SMIM20-203ENST00000515764 ABCA6Q8N139 1617 aa12.91□□□□□ -0.34
SMIM20-203ENST00000515764 LMTK3Q96Q04 1460 aa12.91□□□□□ -0.34
SMIM20-203ENST00000515764 AGLP35573 1532 aa12.89□□□□□ -0.35
SMIM20-203ENST00000515764 SAMD9LQ8IVG5 1584 aa12.89□□□□□ -0.35
SMIM20-203ENST00000515764 KIDINS220Q9ULH0 1771 aa12.89□□□□□ -0.35
SMIM20-203ENST00000515764 GPATCH8Q9UKJ3 1502 aaKnown RBP12.88□□□□□ -0.35
SMIM20-203ENST00000515764 AFAP1Q8N556 730 aa12.88□□□□□ -0.35
SMIM20-203ENST00000515764 PLEKHH2Q8IVE3 1493 aa12.88□□□□□ -0.35
SMIM20-203ENST00000515764 PREX1Q8TCU6 1659 aa12.88□□□□□ -0.35
SMIM20-203ENST00000515764 EHBP1L1Q8N3D4 1523 aa12.88□□□□□ -0.35
SMIM20-203ENST00000515764 TRAPPC8Q9Y2L5 1435 aa12.87□□□□□ -0.35
SMIM20-203ENST00000515764 CEP162Q5TB80 1403 aa12.86□□□□□ -0.35
SMIM20-203ENST00000515764 KIAA1107Q9UPP5 1409 aa12.86□□□□□ -0.35
SMIM20-203ENST00000515764 SYCP2Q9BX26 1530 aa12.85□□□□□ -0.35
SMIM20-203ENST00000515764 REM2Q8IYK8 340 aaPredicted RBP12.85□□□□□ -0.35
SMIM20-203ENST00000515764 MTUS2Q5JR59 1369 aa12.84□□□□□ -0.35
SMIM20-203ENST00000515764 SETD1BQ9UPS6 1966 aaKnown RBP12.83□□□□□ -0.35
SMIM20-203ENST00000515764 CCNB3Q8WWL7 1395 aa12.83□□□□□ -0.36
SMIM20-203ENST00000515764 TIAM1Q13009 1591 aa12.83□□□□□ -0.36
SMIM20-203ENST00000515764 INO80Q9ULG1 1556 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms