RNA–Protein interactions for RNA: ENST00000515764.2

SMIM20-203, Transcript of small integral membrane protein 20, humanhuman

TSL 5

Gene SMIM20, Length 773 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-203ENST00000515764 AEBP2Q6ZN18 517 aaPredicted RBP23.38■■□□□ 1.33
SMIM20-203ENST00000515764 CHIC1Q5VXU3 224 aa22.7■■□□□ 1.22
SMIM20-203ENST00000515764 PHF23Q9BUL5 403 aaPredicted RBP20.01■□□□□ 0.79
SMIM20-203ENST00000515764 NISCHQ9Y2I1 1504 aa19.97■□□□□ 0.79
SMIM20-203ENST00000515764 SENP3Q9H4L4 574 aaPredicted RBP19.75■□□□□ 0.75
SMIM20-203ENST00000515764 FOXD1Q16676 465 aa18.4■□□□□ 0.54
SMIM20-203ENST00000515764 PLPPR3Q6T4P5 718 aa18.35■□□□□ 0.53
SMIM20-203ENST00000515764 CCDC180Q9P1Z9 1646 aa18■□□□□ 0.47
SMIM20-203ENST00000515764 ABCC9O60706 1549 aa17.72■□□□□ 0.43
SMIM20-203ENST00000515764 PPP6R1Q9UPN7 881 aa17.68■□□□□ 0.42
SMIM20-203ENST00000515764 ADRA2BP18089 450 aa17.63■□□□□ 0.41
SMIM20-203ENST00000515764 PIAS4Q8N2W9 510 aaPredicted RBP17.29■□□□□ 0.36
SMIM20-203ENST00000515764 RB1CC1Q8TDY2 1594 aa17.02■□□□□ 0.32
SMIM20-203ENST00000515764 NACADO15069 1562 aa16.94■□□□□ 0.3
SMIM20-203ENST00000515764 MSH5O43196 834 aa16.92■□□□□ 0.3
SMIM20-203ENST00000515764 MYO15BQ96JP2 1530 aa16.79■□□□□ 0.28
SMIM20-203ENST00000515764 UNC13AQ9UPW8 1703 aa16.65■□□□□ 0.26
SMIM20-203ENST00000515764 DCAF8L2P0C7V8 631 aa16.64■□□□□ 0.25
SMIM20-203ENST00000515764 ZCCHC6Q5VYS8 1495 aaKnown RBP16.59■□□□□ 0.25
SMIM20-203ENST00000515764 DCAF1Q9Y4B6 1507 aa16.59■□□□□ 0.25
SMIM20-203ENST00000515764 BICRAQ9NZM4 1560 aa16.48■□□□□ 0.23
SMIM20-203ENST00000515764 DNAJC5BQ9UF47 199 aa16.46■□□□□ 0.23
SMIM20-203ENST00000515764 PABPN1Q86U42 306 aaKnown RBP eCLIP16.43■□□□□ 0.22
SMIM20-203ENST00000515764 SHROOM4Q9ULL8 1493 aa16.4■□□□□ 0.22
SMIM20-203ENST00000515764 SCRIBQ14160 1630 aa16.27■□□□□ 0.19
SMIM20-203ENST00000515764 PPP4R3CPQ6ZMV5 832 aa16.19■□□□□ 0.18
SMIM20-203ENST00000515764 EIF4G1Q04637 1599 aaKnown RBP16.08■□□□□ 0.16
SMIM20-203ENST00000515764 CC2D2AQ9P2K1 1620 aa16.08■□□□□ 0.16
SMIM20-203ENST00000515764 MAPK8IP2Q13387 824 aaPredicted RBP16.03■□□□□ 0.16
SMIM20-203ENST00000515764 POTEDQ86YR6 584 aa16.02■□□□□ 0.16
SMIM20-203ENST00000515764 SCAF1Q9H7N4 1312 aaKnown RBP16■□□□□ 0.15
SMIM20-203ENST00000515764 CECR2Q9BXF3 1484 aa15.99■□□□□ 0.15
SMIM20-203ENST00000515764 DMRT2Q9Y5R5 561 aa15.78■□□□□ 0.12
SMIM20-203ENST00000515764 KCNA4P22459 653 aa15.77■□□□□ 0.12
SMIM20-203ENST00000515764 CNKSR2Q8WXI2 1034 aa15.73■□□□□ 0.11
SMIM20-203ENST00000515764 NCBP3Q53F19 620 aaKnown RBP15.66■□□□□ 0.1
SMIM20-203ENST00000515764 NCAPD3P42695 1498 aa15.6■□□□□ 0.09
SMIM20-203ENST00000515764 SMARCA4P51532 1647 aa15.58■□□□□ 0.09
SMIM20-203ENST00000515764 SMARCA2P51531 1590 aa15.56■□□□□ 0.08
SMIM20-203ENST00000515764 NPM3O75607 178 aaKnown RBP15.54■□□□□ 0.08
SMIM20-203ENST00000515764 BAZ1AQ9NRL2 1556 aaPredicted RBP15.53■□□□□ 0.08
SMIM20-203ENST00000515764 HMGXB3Q12766 1538 aa15.53■□□□□ 0.08
SMIM20-203ENST00000515764 ATAD2BQ9ULI0 1458 aa15.53■□□□□ 0.08
SMIM20-203ENST00000515764 PEG3Q9GZU2 1588 aa15.48■□□□□ 0.07
SMIM20-203ENST00000515764 RNF216Q9NWF9 866 aaPredicted RBP15.45■□□□□ 0.06
SMIM20-203ENST00000515764 HOXD11P31277 338 aaPredicted RBP15.44■□□□□ 0.06
SMIM20-203ENST00000515764 BAZ1BQ9UIG0 1483 aaKnown RBP15.4■□□□□ 0.06
SMIM20-203ENST00000515764 MROH2BQ7Z745 1585 aa15.34■□□□□ 0.05
SMIM20-203ENST00000515764 EHMT2Q96KQ7 1210 aa15.34■□□□□ 0.05
SMIM20-203ENST00000515764 CUX2O14529 1486 aa15.33■□□□□ 0.05
SMIM20-203ENST00000515764 ERCC6Q03468 1493 aa15.33■□□□□ 0.04
SMIM20-203ENST00000515764 LAMC3Q9Y6N6 1575 aa15.28■□□□□ 0.04
SMIM20-203ENST00000515764 NESP48681 1621 aa15.23■□□□□ 0.03
SMIM20-203ENST00000515764 WIZO95785 1651 aa15.19■□□□□ 0.02
SMIM20-203ENST00000515764 THOC2Q8NI27 1593 aaKnown RBP15.17■□□□□ 0.02
SMIM20-203ENST00000515764 KIF21AQ7Z4S6 1674 aa15.14■□□□□ 0.01
SMIM20-203ENST00000515764 DNAJC5Q9H3Z4 198 aa15.13■□□□□ 0.01
SMIM20-203ENST00000515764 PDS5BQ9NTI5 1447 aa15.13■□□□□ 0.01
SMIM20-203ENST00000515764 CADPSQ9ULU8 1353 aa15.09■□□□□ 0.01
SMIM20-203ENST00000515764 DCAF8L1A6NGE4 600 aa15.05■□□□□ -0
SMIM20-203ENST00000515764 RSF1Q96T23 1441 aaPredicted RBP15.05■□□□□ -0
SMIM20-203ENST00000515764 TOP2AP11388 1531 aaKnown RBP15.05■□□□□ -0
SMIM20-203ENST00000515764 MRC2Q9UBG0 1479 aa15□□□□□ -0.01
SMIM20-203ENST00000515764 WDR62O43379 1518 aa14.99□□□□□ -0.01
SMIM20-203ENST00000515764 CFTRP13569 1480 aa14.96□□□□□ -0.01
SMIM20-203ENST00000515764 CEP164Q9UPV0 1460 aa14.95□□□□□ -0.02
SMIM20-203ENST00000515764 SLC4A1APQ9BWU0 796 aaKnown RBP14.95□□□□□ -0.02
SMIM20-203ENST00000515764 PRDM2Q13029 1718 aa14.95□□□□□ -0.02
SMIM20-203ENST00000515764 FANCD2Q9BXW9 1451 aa14.92□□□□□ -0.02
SMIM20-203ENST00000515764 CCDC88BA6NC98 1476 aa14.81□□□□□ -0.04
SMIM20-203ENST00000515764 URB2Q14146 1524 aaKnown RBP14.78□□□□□ -0.04
SMIM20-203ENST00000515764 SLC4A2P04920 1241 aa14.73□□□□□ -0.05
SMIM20-203ENST00000515764 ABCC8Q09428 1581 aa14.71□□□□□ -0.05
SMIM20-203ENST00000515764 CSRNP3Q8WYN3 585 aa14.7□□□□□ -0.06
SMIM20-203ENST00000515764 IFT140Q96RY7 1462 aa14.67□□□□□ -0.06
SMIM20-203ENST00000515764 TOPBP1Q92547 1522 aa14.66□□□□□ -0.06
SMIM20-203ENST00000515764 DNMBPQ6XZF7 1577 aa14.65□□□□□ -0.06
SMIM20-203ENST00000515764 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.65□□□□□ -0.06
SMIM20-203ENST00000515764 OSCARQ8IYS5 282 aa14.57□□□□□ -0.08
SMIM20-203ENST00000515764 EIF4G3O43432 1585 aaKnown RBP14.56□□□□□ -0.08
SMIM20-203ENST00000515764 ZNF608Q9ULD9 1512 aaPredicted RBP14.56□□□□□ -0.08
SMIM20-203ENST00000515764 TARBP1Q13395 1621 aaKnown RBP14.55□□□□□ -0.08
SMIM20-203ENST00000515764 ZBTB22O15209 634 aa14.55□□□□□ -0.08
SMIM20-203ENST00000515764 RNF39Q9H2S5 420 aa14.54□□□□□ -0.08
SMIM20-203ENST00000515764 WDR97A6NE52 1622 aa14.52□□□□□ -0.09
SMIM20-203ENST00000515764 POLA1P09884 1462 aaPredicted RBP14.51□□□□□ -0.09
SMIM20-203ENST00000515764 FOXD4L1Q9NU39 408 aa14.49□□□□□ -0.09
SMIM20-203ENST00000515764 U3KPZ7 1027 aaPredicted RBP14.49□□□□□ -0.09
SMIM20-203ENST00000515764 CHD1O14646 1710 aa14.44□□□□□ -0.1
SMIM20-203ENST00000515764 FGD5Q6ZNL6 1462 aa14.43□□□□□ -0.1
SMIM20-203ENST00000515764 SOGA1O94964 1423 aa14.42□□□□□ -0.1
SMIM20-203ENST00000515764 CUX1P39880 1505 aa14.42□□□□□ -0.1
SMIM20-203ENST00000515764 TRIM41Q8WV44 630 aa14.42□□□□□ -0.1
SMIM20-203ENST00000515764 AQRO60306 1485 aaKnown RBP eCLIP14.42□□□□□ -0.1
SMIM20-203ENST00000515764 RIMBP3CA6NJZ7 1639 aa14.41□□□□□ -0.1
SMIM20-203ENST00000515764 RIMBP3BA6NNM3 1639 aa14.41□□□□□ -0.1
SMIM20-203ENST00000515764 RIMBP3Q9UFD9 1639 aa14.41□□□□□ -0.1
SMIM20-203ENST00000515764 RAD54L2Q9Y4B4 1467 aa14.39□□□□□ -0.11
SMIM20-203ENST00000515764 ARHGEF11O15085 1522 aa14.36□□□□□ -0.11
SMIM20-203ENST00000515764 MAGI1Q96QZ7 1491 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms