RNA–Protein interactions for RNA: ENST00000515585.1

ABCC3-216, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-216ENST00000515585 MAPKBP1O60336 1514 aa20.94■□□□□ 0.94
ABCC3-216ENST00000515585 KDM6BO15054 1643 aa20.93■□□□□ 0.94
ABCC3-216ENST00000515585 DNMT1P26358 1616 aaKnown RBP20.93■□□□□ 0.94
ABCC3-216ENST00000515585 ABCA9Q8IUA7 1624 aa20.91■□□□□ 0.94
ABCC3-216ENST00000515585 DIP2BQ9P265 1576 aa20.91■□□□□ 0.94
ABCC3-216ENST00000515585 ARAP3Q8WWN8 1544 aa20.9■□□□□ 0.94
ABCC3-216ENST00000515585 CROCC2H7BZ55 1655 aa20.89■□□□□ 0.94
ABCC3-216ENST00000515585 PTPRKQ15262 1439 aa20.89■□□□□ 0.94
ABCC3-216ENST00000515585 CAMSAP2Q08AD1 1489 aa20.88■□□□□ 0.93
ABCC3-216ENST00000515585 ASXL2Q76L83 1435 aa20.87■□□□□ 0.93
ABCC3-216ENST00000515585 SAMD9LQ8IVG5 1584 aa20.86■□□□□ 0.93
ABCC3-216ENST00000515585 FAM50AQ14320 339 aaKnown RBP20.85■□□□□ 0.93
ABCC3-216ENST00000515585 AKNAQ7Z591 1439 aa20.84■□□□□ 0.93
ABCC3-216ENST00000515585 ARHGEF5Q12774 1597 aa20.84■□□□□ 0.93
ABCC3-216ENST00000515585 GCC2Q8IWJ2 1684 aa20.83■□□□□ 0.93
ABCC3-216ENST00000515585 PLCH2O75038 1416 aa20.81■□□□□ 0.92
ABCC3-216ENST00000515585 DAPK1P53355 1430 aa20.81■□□□□ 0.92
ABCC3-216ENST00000515585 ADGBQ8N7X0 1667 aa20.8■□□□□ 0.92
ABCC3-216ENST00000515585 ABCC5O15440 1437 aa20.8■□□□□ 0.92
ABCC3-216ENST00000515585 CFDP1Q9UEE9 299 aaPredicted RBP20.8■□□□□ 0.92
ABCC3-216ENST00000515585 ADGRL1O94910 1474 aa20.8■□□□□ 0.92
ABCC3-216ENST00000515585 ZNF644Q9H582 1327 aaPredicted RBP20.78■□□□□ 0.92
ABCC3-216ENST00000515585 HFM1A2PYH4 1435 aa20.78■□□□□ 0.92
ABCC3-216ENST00000515585 MBD5Q9P267 1494 aa20.78■□□□□ 0.92
ABCC3-216ENST00000515585 SHANK2Q9UPX8 1470 aa20.77■□□□□ 0.92
ABCC3-216ENST00000515585 ADGRL2O95490 1459 aa20.76■□□□□ 0.91
ABCC3-216ENST00000515585 ARHGAP5Q13017 1502 aa20.76■□□□□ 0.91
ABCC3-216ENST00000515585 SETD5Q9C0A6 1442 aa20.76■□□□□ 0.91
ABCC3-216ENST00000515585 ROCK1Q13464 1354 aa20.75■□□□□ 0.91
ABCC3-216ENST00000515585 ABCC1P33527 1531 aa20.74■□□□□ 0.91
ABCC3-216ENST00000515585 GLI2P10070 1586 aa20.74■□□□□ 0.91
ABCC3-216ENST00000515585 NAIPQ13075 1403 aa20.74■□□□□ 0.91
ABCC3-216ENST00000515585 KIAA1107Q9UPP5 1409 aa20.74■□□□□ 0.91
ABCC3-216ENST00000515585 MAST1Q9Y2H9 1570 aa20.73■□□□□ 0.91
ABCC3-216ENST00000515585 HRCP23327 699 aa20.73■□□□□ 0.91
ABCC3-216ENST00000515585 PLEKHH2Q8IVE3 1493 aa20.73■□□□□ 0.91
ABCC3-216ENST00000515585 TSPOAP1O95153 1857 aa20.73■□□□□ 0.91
ABCC3-216ENST00000515585 HECW2Q9P2P5 1572 aa20.72■□□□□ 0.91
ABCC3-216ENST00000515585 RAB3GAP2Q9H2M9 1393 aa20.72■□□□□ 0.91
ABCC3-216ENST00000515585 ITGAEP38570 1179 aa20.71■□□□□ 0.91
ABCC3-216ENST00000515585 FBXO41Q8TF61 875 aa20.71■□□□□ 0.91
ABCC3-216ENST00000515585 KCNH8Q96L42 1107 aa20.71■□□□□ 0.91
ABCC3-216ENST00000515585 MAP3K4Q9Y6R4 1608 aa20.71■□□□□ 0.91
ABCC3-216ENST00000515585 SYCP2Q9BX26 1530 aa20.7■□□□□ 0.9
ABCC3-216ENST00000515585 ARHGEF12Q9NZN5 1544 aa20.69■□□□□ 0.9
ABCC3-216ENST00000515585 CCDC141Q6ZP82 1450 aa20.69■□□□□ 0.9
ABCC3-216ENST00000515585 CFAP74Q9C0B2 1584 aa20.66■□□□□ 0.9
ABCC3-216ENST00000515585 DHX57Q6P158 1386 aaKnown RBP20.65■□□□□ 0.9
ABCC3-216ENST00000515585 COL17A1Q9UMD9 1497 aaPredicted RBP20.64■□□□□ 0.89
ABCC3-216ENST00000515585 NCOA1Q15788 1441 aa20.64■□□□□ 0.89
ABCC3-216ENST00000515585 PLXNC1O60486 1568 aa20.63■□□□□ 0.89
ABCC3-216ENST00000515585 FANCAO15360 1455 aa20.62■□□□□ 0.89
ABCC3-216ENST00000515585 RSPH4AQ5TD94 716 aa20.62■□□□□ 0.89
ABCC3-216ENST00000515585 EFCAB2Q5VUJ9 269 aa20.62■□□□□ 0.89
ABCC3-216ENST00000515585 C9orf84Q5VXU9 1444 aa20.61■□□□□ 0.89
ABCC3-216ENST00000515585 ZNF777Q9ULD5 760 aaPredicted RBP20.61■□□□□ 0.89
ABCC3-216ENST00000515585 PPRC1Q5VV67 1664 aaKnown RBP20.58■□□□□ 0.89
ABCC3-216ENST00000515585 CD109Q6YHK3 1445 aa20.58■□□□□ 0.88
ABCC3-216ENST00000515585 HNRNPMP52272 730 aaKnown RBP eCLIP20.57■□□□□ 0.88
ABCC3-216ENST00000515585 CLSPNQ9HAW4 1339 aa20.56■□□□□ 0.88
ABCC3-216ENST00000515585 INO80Q9ULG1 1556 aaPredicted RBP20.56■□□□□ 0.88
ABCC3-216ENST00000515585 NEO1Q92859 1461 aa20.56■□□□□ 0.88
ABCC3-216ENST00000515585 TRAPPC8Q9Y2L5 1435 aa20.55■□□□□ 0.88
ABCC3-216ENST00000515585 CCER1Q8TC90 406 aaPredicted RBP20.55■□□□□ 0.88
ABCC3-216ENST00000515585 CHIC2Q9UKJ5 165 aa20.55■□□□□ 0.88
ABCC3-216ENST00000515585 ANKRD30AQ9BXX3 1397 aa20.55■□□□□ 0.88
ABCC3-216ENST00000515585 ZFYVE16Q7Z3T8 1539 aa20.53■□□□□ 0.88
ABCC3-216ENST00000515585 ZEB1P37275 1124 aaPredicted RBP20.53■□□□□ 0.88
ABCC3-216ENST00000515585 RRP7BPQ9NSQ0 103 aa20.53■□□□□ 0.88
ABCC3-216ENST00000515585 KDM5CP41229 1560 aa20.52■□□□□ 0.88
ABCC3-216ENST00000515585 RTEL1-TNFRSF6BF6WH68 1400 aa20.52■□□□□ 0.87
ABCC3-216ENST00000515585 ACIN1Q9UKV3 1341 aaKnown RBP20.5■□□□□ 0.87
ABCC3-216ENST00000515585 DENND4BO75064 1496 aaPredicted RBP20.49■□□□□ 0.87
ABCC3-216ENST00000515585 SCAPERQ9BY12 1400 aa20.48■□□□□ 0.87
ABCC3-216ENST00000515585 KDM5DQ9BY66 1539 aa20.48■□□□□ 0.87
ABCC3-216ENST00000515585 RICTORQ6R327 1708 aa20.47■□□□□ 0.87
ABCC3-216ENST00000515585 KIDINS220Q9ULH0 1771 aa20.47■□□□□ 0.87
ABCC3-216ENST00000515585 TSPY4P0CV99 314 aa20.47■□□□□ 0.87
ABCC3-216ENST00000515585 TSPY10P0CW01 314 aa20.47■□□□□ 0.87
ABCC3-216ENST00000515585 ANKRD50Q9ULJ7 1429 aa20.46■□□□□ 0.87
ABCC3-216ENST00000515585 ATP7AQ04656 1500 aa20.46■□□□□ 0.87
ABCC3-216ENST00000515585 DUOX2Q9NRD8 1548 aa20.46■□□□□ 0.87
ABCC3-216ENST00000515585 KIF15Q9NS87 1388 aa20.46■□□□□ 0.87
ABCC3-216ENST00000515585 POGZQ7Z3K3 1410 aa20.45■□□□□ 0.86
ABCC3-216ENST00000515585 TEX14Q8IWB6 1497 aa20.45■□□□□ 0.86
ABCC3-216ENST00000515585 UNC13BO14795 1591 aa20.45■□□□□ 0.86
ABCC3-216ENST00000515585 ZNF518AQ6AHZ1 1483 aa20.44■□□□□ 0.86
ABCC3-216ENST00000515585 FRMPD1Q5SYB0 1578 aa20.42■□□□□ 0.86
ABCC3-216ENST00000515585 PZPP20742 1482 aa20.41■□□□□ 0.86
ABCC3-216ENST00000515585 MAGI2Q86UL8 1455 aa20.41■□□□□ 0.86
ABCC3-216ENST00000515585 MLH3Q9UHC1 1453 aa20.41■□□□□ 0.86
ABCC3-216ENST00000515585 ERBINQ96RT1 1412 aa20.4■□□□□ 0.86
ABCC3-216ENST00000515585 EIF2AK4Q9P2K8 1649 aaKnown RBP20.39■□□□□ 0.86
ABCC3-216ENST00000515585 DEPDC5O75140 1603 aa20.38■□□□□ 0.85
ABCC3-216ENST00000515585 BCORL1Q5H9F3 1711 aa20.38■□□□□ 0.85
ABCC3-216ENST00000515585 ZMYM4Q5VZL5 1548 aa20.37■□□□□ 0.85
ABCC3-216ENST00000515585 AFAP1Q8N556 730 aa20.37■□□□□ 0.85
ABCC3-216ENST00000515585 SPAG9O60271 1321 aaKnown RBP20.36■□□□□ 0.85
ABCC3-216ENST00000515585 IQGAP3Q86VI3 1631 aa20.35■□□□□ 0.85
ABCC3-216ENST00000515585 ABCA6Q8N139 1617 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms