RNA–Protein interactions for RNA: ENST00000515499.5

TRIM41-208, Transcript of tripartite motif containing 41, humanhuman

TSL 3

Gene TRIM41, Length 914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-208ENST00000515499 GPATCH8Q9UKJ3 1502 aaKnown RBP32.51■■■□□ 2.8
TRIM41-208ENST00000515499 PREX2Q70Z35 1606 aa32.51■■■□□ 2.8
TRIM41-208ENST00000515499 CDC42BPAQ5VT25 1732 aa32.51■■■□□ 2.8
TRIM41-208ENST00000515499 ARHGAP5Q13017 1502 aa32.51■■■□□ 2.79
TRIM41-208ENST00000515499 AKNAQ7Z591 1439 aa32.51■■■□□ 2.79
TRIM41-208ENST00000515499 CDC42BPBQ9Y5S2 1711 aa32.5■■■□□ 2.79
TRIM41-208ENST00000515499 COL17A1Q9UMD9 1497 aaPredicted RBP32.49■■■□□ 2.79
TRIM41-208ENST00000515499 CFDP1Q9UEE9 299 aaPredicted RBP32.43■■■□□ 2.78
TRIM41-208ENST00000515499 ITSN2Q9NZM3 1697 aa32.4■■■□□ 2.78
TRIM41-208ENST00000515499 ADGRL1O94910 1474 aa32.4■■■□□ 2.78
TRIM41-208ENST00000515499 SCAPERQ9BY12 1400 aa32.37■■■□□ 2.77
TRIM41-208ENST00000515499 DENND4BO75064 1496 aaPredicted RBP32.36■■■□□ 2.77
TRIM41-208ENST00000515499 ZNF777Q9ULD5 760 aaPredicted RBP32.35■■■□□ 2.77
TRIM41-208ENST00000515499 RAPGEF3O95398 923 aa32.34■■■□□ 2.77
TRIM41-208ENST00000515499 MYOM3Q5VTT5 1437 aa32.3■■■□□ 2.76
TRIM41-208ENST00000515499 SAMD9LQ8IVG5 1584 aa32.3■■■□□ 2.76
TRIM41-208ENST00000515499 ABCC1P33527 1531 aa32.29■■■□□ 2.76
TRIM41-208ENST00000515499 PLEKHH2Q8IVE3 1493 aa32.28■■■□□ 2.76
TRIM41-208ENST00000515499 RICTORQ6R327 1708 aa32.27■■■□□ 2.76
TRIM41-208ENST00000515499 POGZQ7Z3K3 1410 aa32.26■■■□□ 2.76
TRIM41-208ENST00000515499 KIAA1107Q9UPP5 1409 aa32.26■■■□□ 2.76
TRIM41-208ENST00000515499 FRMPD1Q5SYB0 1578 aa32.26■■■□□ 2.75
TRIM41-208ENST00000515499 MIA2Q96PC5 1412 aa32.26■■■□□ 2.75
TRIM41-208ENST00000515499 ARHGEF12Q9NZN5 1544 aa32.25■■■□□ 2.75
TRIM41-208ENST00000515499 ZNF644Q9H582 1327 aaPredicted RBP32.24■■■□□ 2.75
TRIM41-208ENST00000515499 PPARGC1BQ86YN6 1023 aaKnown RBP32.22■■■□□ 2.75
TRIM41-208ENST00000515499 ZNF518AQ6AHZ1 1483 aa32.22■■■□□ 2.75
TRIM41-208ENST00000515499 HNRNPMP52272 730 aaKnown RBP eCLIP32.2■■■□□ 2.75
TRIM41-208ENST00000515499 SYCP2Q9BX26 1530 aa32.2■■■□□ 2.74
TRIM41-208ENST00000515499 AFAP1Q8N556 730 aa32.19■■■□□ 2.74
TRIM41-208ENST00000515499 TRAPPC8Q9Y2L5 1435 aa32.18■■■□□ 2.74
TRIM41-208ENST00000515499 CAMSAP2Q08AD1 1489 aa32.18■■■□□ 2.74
TRIM41-208ENST00000515499 ZMYM4Q5VZL5 1548 aa32.17■■■□□ 2.74
TRIM41-208ENST00000515499 FGD6Q6ZV73 1430 aa32.14■■■□□ 2.74
TRIM41-208ENST00000515499 MAGI2Q86UL8 1455 aa32.14■■■□□ 2.74
TRIM41-208ENST00000515499 MBD5Q9P267 1494 aa32.14■■■□□ 2.74
TRIM41-208ENST00000515499 KDM5CP41229 1560 aa32.14■■■□□ 2.74
TRIM41-208ENST00000515499 RSPH4AQ5TD94 716 aa32.12■■■□□ 2.73
TRIM41-208ENST00000515499 PTPN23Q9H3S7 1636 aa32.09■■■□□ 2.73
TRIM41-208ENST00000515499 MLH3Q9UHC1 1453 aa32.07■■■□□ 2.72
TRIM41-208ENST00000515499 TCOF1Q13428 1488 aaKnown RBP32.06■■■□□ 2.72
TRIM41-208ENST00000515499 ZFYVE16Q7Z3T8 1539 aa32.05■■■□□ 2.72
TRIM41-208ENST00000515499 ARHGEF5Q12774 1597 aa32.05■■■□□ 2.72
TRIM41-208ENST00000515499 SPAG9O60271 1321 aaKnown RBP32.04■■■□□ 2.72
TRIM41-208ENST00000515499 HECW2Q9P2P5 1572 aa32.04■■■□□ 2.72
TRIM41-208ENST00000515499 CCDC141Q6ZP82 1450 aa32.03■■■□□ 2.72
TRIM41-208ENST00000515499 MYT1LQ9UL68 1186 aa32.03■■■□□ 2.72
TRIM41-208ENST00000515499 ARHGEF40Q8TER5 1519 aa32.03■■■□□ 2.72
TRIM41-208ENST00000515499 YEATS2Q9ULM3 1422 aa32.02■■■□□ 2.72
TRIM41-208ENST00000515499 TSPY4P0CV99 314 aa31.97■■■□□ 2.71
TRIM41-208ENST00000515499 TSPY10P0CW01 314 aa31.97■■■□□ 2.71
TRIM41-208ENST00000515499 KIDINS220Q9ULH0 1771 aa31.96■■■□□ 2.71
TRIM41-208ENST00000515499 RTEL1-TNFRSF6BF6WH68 1400 aa31.95■■■□□ 2.71
TRIM41-208ENST00000515499 FAM50AQ14320 339 aaKnown RBP31.95■■■□□ 2.71
TRIM41-208ENST00000515499 ATP10AO60312 1499 aa31.95■■■□□ 2.7
TRIM41-208ENST00000515499 ATP7AQ04656 1500 aa31.94■■■□□ 2.7
TRIM41-208ENST00000515499 INO80Q9ULG1 1556 aaPredicted RBP31.94■■■□□ 2.7
TRIM41-208ENST00000515499 DIP2CQ9Y2E4 1556 aa31.91■■■□□ 2.7
TRIM41-208ENST00000515499 ABCA6Q8N139 1617 aa31.9■■■□□ 2.7
TRIM41-208ENST00000515499 ABCC5O15440 1437 aa31.9■■■□□ 2.7
TRIM41-208ENST00000515499 C9orf84Q5VXU9 1444 aa31.89■■■□□ 2.7
TRIM41-208ENST00000515499 DNMT1P26358 1616 aaKnown RBP31.89■■■□□ 2.7
TRIM41-208ENST00000515499 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.88■■■□□ 2.691e-10■■□□□ 14
TRIM41-208ENST00000515499 DAPK1P53355 1430 aa31.88■■■□□ 2.69
TRIM41-208ENST00000515499 MAST1Q9Y2H9 1570 aa31.86■■■□□ 2.69
TRIM41-208ENST00000515499 RRBP1Q9P2E9 1410 aaKnown RBP31.86■■■□□ 2.69
TRIM41-208ENST00000515499 REREQ9P2R6 1566 aa31.85■■■□□ 2.69
TRIM41-208ENST00000515499 SHANK2Q9UPX8 1470 aa31.84■■■□□ 2.69
TRIM41-208ENST00000515499 CROCC2H7BZ55 1655 aa31.83■■■□□ 2.69
TRIM41-208ENST00000515499 ARID4BQ4LE39 1312 aaPredicted RBP31.82■■■□□ 2.68
TRIM41-208ENST00000515499 ADGBQ8N7X0 1667 aa31.79■■■□□ 2.68
TRIM41-208ENST00000515499 A2MP01023 1474 aa31.78■■■□□ 2.68
TRIM41-208ENST00000515499 SIGLEC1Q9BZZ2 1709 aa31.77■■■□□ 2.68
TRIM41-208ENST00000515499 AGLP35573 1532 aa31.75■■■□□ 2.67
TRIM41-208ENST00000515499 DHX29Q7Z478 1369 aaKnown RBP31.74■■■□□ 2.67
TRIM41-208ENST00000515499 PLXNC1O60486 1568 aa31.73■■■□□ 2.67
TRIM41-208ENST00000515499 CHIC2Q9UKJ5 165 aa31.72■■■□□ 2.67
TRIM41-208ENST00000515499 ANKRD30AQ9BXX3 1397 aa31.69■■■□□ 2.66
TRIM41-208ENST00000515499 KDM4FA0A1W2PPD8 638 aa31.69■■■□□ 2.66
TRIM41-208ENST00000515499 BCORL1Q5H9F3 1711 aa31.69■■■□□ 2.66
TRIM41-208ENST00000515499 PTPRKQ15262 1439 aa31.68■■■□□ 2.66
TRIM41-208ENST00000515499 NCOA1Q15788 1441 aa31.67■■■□□ 2.66
TRIM41-208ENST00000515499 ADGRL2O95490 1459 aa31.67■■■□□ 2.66
TRIM41-208ENST00000515499 ITGAEP38570 1179 aa31.67■■■□□ 2.66
TRIM41-208ENST00000515499 RRP7BPQ9NSQ0 103 aa31.66■■■□□ 2.66
TRIM41-208ENST00000515499 KIF15Q9NS87 1388 aa31.66■■■□□ 2.66
TRIM41-208ENST00000515499 MLECQ14165 292 aa31.64■■■□□ 2.66
TRIM41-208ENST00000515499 DUOX2Q9NRD8 1548 aa31.64■■■□□ 2.66
TRIM41-208ENST00000515499 ADAMTSL3P82987 1691 aa31.62■■■□□ 2.65
TRIM41-208ENST00000515499 ROCK1Q13464 1354 aa31.61■■■□□ 2.65
TRIM41-208ENST00000515499 KIF3BO15066 747 aa31.57■■■□□ 2.64
TRIM41-208ENST00000515499 ERBINQ96RT1 1412 aa31.55■■■□□ 2.64
TRIM41-208ENST00000515499 EIF2AK4Q9P2K8 1649 aaKnown RBP31.53■■■□□ 2.64
TRIM41-208ENST00000515499 GGT6Q6P531 493 aa31.53■■■□□ 2.64
TRIM41-208ENST00000515499 MADDQ8WXG6 1647 aa31.52■■■□□ 2.64
TRIM41-208ENST00000515499 PPP6R1Q9UPN7 881 aa31.51■■■□□ 2.63
TRIM41-208ENST00000515499 FER1L4A9Z1Z3 1794 aa31.48■■■□□ 2.63
TRIM41-208ENST00000515499 ESF1Q9H501 851 aaKnown RBP31.47■■■□□ 2.63
TRIM41-208ENST00000515499 ANKRD50Q9ULJ7 1429 aa31.47■■■□□ 2.63
TRIM41-208ENST00000515499 RNF17Q9BXT8 1623 aaKnown RBP31.45■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms