RNA–Protein interactions for RNA: ENST00000515499.5

TRIM41-208, Transcript of tripartite motif containing 41, humanhuman

TSL 3

Gene TRIM41, Length 914 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-208ENST00000515499 NISCHQ9Y2I1 1504 aa49.91■■■■■ 5.58
TRIM41-208ENST00000515499 CCDC180Q9P1Z9 1646 aa44.21■■■■■ 4.67
TRIM41-208ENST00000515499 ABCC9O60706 1549 aa42.92■■■■■ 4.46
TRIM41-208ENST00000515499 ZCCHC6Q5VYS8 1495 aaKnown RBP41.63■■■■■ 4.25
TRIM41-208ENST00000515499 DCAF8L2P0C7V8 631 aa41.57■■■■■ 4.25
TRIM41-208ENST00000515499 NACADO15069 1562 aa41.5■■■■■ 4.23
TRIM41-208ENST00000515499 RB1CC1Q8TDY2 1594 aa41.46■■■■■ 4.23
TRIM41-208ENST00000515499 MYO15BQ96JP2 1530 aa41.39■■■■■ 4.22
TRIM41-208ENST00000515499 DCAF1Q9Y4B6 1507 aa41.34■■■■■ 4.21
TRIM41-208ENST00000515499 UNC13AQ9UPW8 1703 aa40.48■■■■■ 4.07
TRIM41-208ENST00000515499 SCRIBQ14160 1630 aa40.34■■■■■ 4.05
TRIM41-208ENST00000515499 PABPN1Q86U42 306 aaKnown RBP eCLIP40.18■■■■■ 4.02
TRIM41-208ENST00000515499 BICRAQ9NZM4 1560 aa40.17■■■■■ 4.02
TRIM41-208ENST00000515499 SHROOM4Q9ULL8 1493 aa39.81■■■■□ 3.96
TRIM41-208ENST00000515499 DNAJC5BQ9UF47 199 aa39.1■■■■□ 3.85
TRIM41-208ENST00000515499 EIF4G1Q04637 1599 aaKnown RBP39.08■■■■□ 3.85
TRIM41-208ENST00000515499 CC2D2AQ9P2K1 1620 aa38.84■■■■□ 3.81
TRIM41-208ENST00000515499 CECR2Q9BXF3 1484 aa38.83■■■■□ 3.81
TRIM41-208ENST00000515499 BAZ1AQ9NRL2 1556 aaPredicted RBP38.66■■■■□ 3.78
TRIM41-208ENST00000515499 SMARCA4P51532 1647 aa38.63■■■■□ 3.77
TRIM41-208ENST00000515499 MROH2BQ7Z745 1585 aa38.45■■■■□ 3.75
TRIM41-208ENST00000515499 ATAD2BQ9ULI0 1458 aa38.36■■■■□ 3.73
TRIM41-208ENST00000515499 SMARCA2P51531 1590 aa38.33■■■■□ 3.73
TRIM41-208ENST00000515499 NCAPD3P42695 1498 aa38.3■■■■□ 3.72
TRIM41-208ENST00000515499 PEG3Q9GZU2 1588 aa38.27■■■■□ 3.72
TRIM41-208ENST00000515499 RSF1Q96T23 1441 aaPredicted RBP38.16■■■■□ 3.7
TRIM41-208ENST00000515499 HMGXB3Q12766 1538 aa38.12■■■■□ 3.69
TRIM41-208ENST00000515499 BAZ1BQ9UIG0 1483 aaKnown RBP38.05■■■■□ 3.68
TRIM41-208ENST00000515499 WIZO95785 1651 aa38.04■■■■□ 3.68
TRIM41-208ENST00000515499 TOP2AP11388 1531 aaKnown RBP37.68■■■■□ 3.62
TRIM41-208ENST00000515499 SUPT5HO00267 1087 aaKnown RBP37.45■■■■□ 3.59
TRIM41-208ENST00000515499 CCDC88BA6NC98 1476 aa37.26■■■■□ 3.55
TRIM41-208ENST00000515499 NESP48681 1621 aa37.23■■■■□ 3.55
TRIM41-208ENST00000515499 LAMC3Q9Y6N6 1575 aa37.22■■■■□ 3.55
TRIM41-208ENST00000515499 CADPSQ9ULU8 1353 aa37.21■■■■□ 3.55
TRIM41-208ENST00000515499 CFTRP13569 1480 aa37.05■■■■□ 3.52
TRIM41-208ENST00000515499 PDS5BQ9NTI5 1447 aa36.98■■■■□ 3.51
TRIM41-208ENST00000515499 ERCC6Q03468 1493 aa36.97■■■■□ 3.51
TRIM41-208ENST00000515499 KIF21AQ7Z4S6 1674 aa36.79■■■■□ 3.48
TRIM41-208ENST00000515499 PRDM2Q13029 1718 aa36.76■■■■□ 3.47
TRIM41-208ENST00000515499 FANCD2Q9BXW9 1451 aa36.75■■■■□ 3.47
TRIM41-208ENST00000515499 CEP164Q9UPV0 1460 aa36.68■■■■□ 3.46
TRIM41-208ENST00000515499 THOC2Q8NI27 1593 aaKnown RBP36.58■■■■□ 3.45
TRIM41-208ENST00000515499 MRC2Q9UBG0 1479 aa36.55■■■■□ 3.44
TRIM41-208ENST00000515499 CUX2O14529 1486 aa36.47■■■■□ 3.43
TRIM41-208ENST00000515499 WDR62O43379 1518 aa36.41■■■■□ 3.42
TRIM41-208ENST00000515499 URB2Q14146 1524 aaKnown RBP36.36■■■■□ 3.41
TRIM41-208ENST00000515499 ABCC8Q09428 1581 aa36.27■■■■□ 3.4
TRIM41-208ENST00000515499 TOPBP1Q92547 1522 aa36.21■■■■□ 3.39
TRIM41-208ENST00000515499 DNMBPQ6XZF7 1577 aa36.19■■■■□ 3.38
TRIM41-208ENST00000515499 CUX1P39880 1505 aa36.05■■■■□ 3.36
TRIM41-208ENST00000515499 WRNQ14191 1432 aaPredicted RBP eCLIP35.97■■■■□ 3.354e-9■■□□□ 14.1
TRIM41-208ENST00000515499 POLA1P09884 1462 aaPredicted RBP35.92■■■■□ 3.34
TRIM41-208ENST00000515499 IFT140Q96RY7 1462 aa35.91■■■■□ 3.34
TRIM41-208ENST00000515499 FGD5Q6ZNL6 1462 aa35.87■■■■□ 3.33
TRIM41-208ENST00000515499 TOP2BQ02880 1626 aa35.84■■■■□ 3.33
TRIM41-208ENST00000515499 SYNJ1O43426 1573 aa35.83■■■■□ 3.33
TRIM41-208ENST00000515499 BIVM-ERCC5R4GMW8 1640 aa35.83■■■■□ 3.33
TRIM41-208ENST00000515499 SOGA1O94964 1423 aa35.81■■■■□ 3.32
TRIM41-208ENST00000515499 TARBP1Q13395 1621 aaKnown RBP35.78■■■■□ 3.32
TRIM41-208ENST00000515499 RAD54L2Q9Y4B4 1467 aa35.75■■■■□ 3.31
TRIM41-208ENST00000515499 ZNF608Q9ULD9 1512 aaPredicted RBP35.69■■■■□ 3.3
TRIM41-208ENST00000515499 ABCA10Q8WWZ4 1543 aa35.57■■■■□ 3.28
TRIM41-208ENST00000515499 TDRD9Q8NDG6 1382 aaKnown RBP35.55■■■■□ 3.28
TRIM41-208ENST00000515499 EIF4G3O43432 1585 aaKnown RBP35.55■■■■□ 3.28
TRIM41-208ENST00000515499 AQRO60306 1485 aaKnown RBP eCLIP35.54■■■■□ 3.285e-7■■■■□ 26.3
TRIM41-208ENST00000515499 WDR97A6NE52 1622 aa35.54■■■■□ 3.28
TRIM41-208ENST00000515499 TRIM41Q8WV44 630 aa35.39■■■■□ 3.26
TRIM41-208ENST00000515499 GAPVD1Q14C86 1478 aa35.38■■■■□ 3.25
TRIM41-208ENST00000515499 ABCA5Q8WWZ7 1642 aa35.37■■■■□ 3.25
TRIM41-208ENST00000515499 GRIN2BQ13224 1484 aa35.34■■■■□ 3.25
TRIM41-208ENST00000515499 PBRM1Q86U86 1689 aa35.25■■■■□ 3.23
TRIM41-208ENST00000515499 SNAPC4Q5SXM2 1469 aa35.22■■■■□ 3.23
TRIM41-208ENST00000515499 MAGI1Q96QZ7 1491 aaPredicted RBP35.21■■■■□ 3.23
TRIM41-208ENST00000515499 KIF27Q86VH2 1401 aa35.2■■■■□ 3.23
TRIM41-208ENST00000515499 CHIC1Q5VXU3 224 aa35.18■■■■□ 3.22
TRIM41-208ENST00000515499 ERICH3Q5RHP9 1530 aa35.15■■■■□ 3.22
TRIM41-208ENST00000515499 FBLN2P98095 1184 aa35.07■■■■□ 3.2
TRIM41-208ENST00000515499 SYNJ2O15056 1496 aa35.06■■■■□ 3.2
TRIM41-208ENST00000515499 OSCARQ8IYS5 282 aa35.06■■■■□ 3.2
TRIM41-208ENST00000515499 CHMP7Q8WUX9 453 aaPredicted RBP35.05■■■■□ 3.2
TRIM41-208ENST00000515499 IGF1RP08069 1367 aa35.03■■■■□ 3.2
TRIM41-208ENST00000515499 CHD1O14646 1710 aa35.03■■■■□ 3.2
TRIM41-208ENST00000515499 FHAD1B1AJZ9 1412 aa35■■■■□ 3.19
TRIM41-208ENST00000515499 ADAMTS12P58397 1594 aa35■■■■□ 3.19
TRIM41-208ENST00000515499 DNAJC5Q9H3Z4 198 aa34.98■■■■□ 3.19
TRIM41-208ENST00000515499 RUSC2Q8N2Y8 1516 aa34.96■■■■□ 3.19
TRIM41-208ENST00000515499 CUL7Q14999 1698 aa34.89■■■■□ 3.18
TRIM41-208ENST00000515499 GRIN2AQ12879 1464 aa34.86■■■■□ 3.17
TRIM41-208ENST00000515499 CARMIL1Q5VZK9 1371 aa34.83■■■■□ 3.17
TRIM41-208ENST00000515499 EEA1Q15075 1411 aa34.78■■■■□ 3.16
TRIM41-208ENST00000515499 NUP160Q12769 1436 aa34.71■■■■□ 3.15
TRIM41-208ENST00000515499 CSRNP3Q8WYN3 585 aa34.69■■■■□ 3.14
TRIM41-208ENST00000515499 CLASP1Q7Z460 1538 aa34.68■■■■□ 3.14
TRIM41-208ENST00000515499 CEP170Q5SW79 1584 aa34.66■■■■□ 3.14
TRIM41-208ENST00000515499 RAPGEF2Q9Y4G8 1499 aa34.65■■■■□ 3.14
TRIM41-208ENST00000515499 PRXQ9BXM0 1461 aa34.61■■■■□ 3.13
TRIM41-208ENST00000515499 FAM9AQ8IZU1 332 aaPredicted RBP34.6■■■■□ 3.13
TRIM41-208ENST00000515499 KIAA0586Q9BVV6 1533 aa34.48■■■■□ 3.11
TRIM41-208ENST00000515499 ARHGEF11O15085 1522 aa34.44■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms