RNA–Protein interactions for RNA: ENST00000514508.1

COPB2-212, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-212ENST00000514508 CDC42BPAQ5VT25 1732 aa19.59■□□□□ 0.73
COPB2-212ENST00000514508 DENND4BO75064 1496 aaPredicted RBP19.58■□□□□ 0.72
COPB2-212ENST00000514508 ADGRL1O94910 1474 aa19.57■□□□□ 0.72
COPB2-212ENST00000514508 RAPGEF3O95398 923 aa19.56■□□□□ 0.72
COPB2-212ENST00000514508 RICTORQ6R327 1708 aa19.56■□□□□ 0.72
COPB2-212ENST00000514508 FRMPD1Q5SYB0 1578 aa19.54■□□□□ 0.72
COPB2-212ENST00000514508 SCAPERQ9BY12 1400 aa19.54■□□□□ 0.72
COPB2-212ENST00000514508 GPATCH8Q9UKJ3 1502 aaKnown RBP19.54■□□□□ 0.72
COPB2-212ENST00000514508 SUPT6HQ7KZ85 1726 aaKnown RBP19.54■□□□□ 0.72
COPB2-212ENST00000514508 CCNB3Q8WWL7 1395 aa19.53■□□□□ 0.72
COPB2-212ENST00000514508 LRRC9Q6ZRR7 1453 aa19.53■□□□□ 0.72
COPB2-212ENST00000514508 APLP2Q06481 763 aa19.52■□□□□ 0.72
COPB2-212ENST00000514508 ITSN2Q9NZM3 1697 aa19.5■□□□□ 0.71
COPB2-212ENST00000514508 POGZQ7Z3K3 1410 aa19.5■□□□□ 0.71
COPB2-212ENST00000514508 NCOA2Q15596 1464 aa19.49■□□□□ 0.71
COPB2-212ENST00000514508 ZMYM4Q5VZL5 1548 aa19.49■□□□□ 0.71
COPB2-212ENST00000514508 CFDP1Q9UEE9 299 aaPredicted RBP19.48■□□□□ 0.71
COPB2-212ENST00000514508 ABCC1P33527 1531 aa19.47■□□□□ 0.71
COPB2-212ENST00000514508 KANK4Q5T7N3 995 aaPredicted RBP19.46■□□□□ 0.71
COPB2-212ENST00000514508 ZNF518AQ6AHZ1 1483 aa19.46■□□□□ 0.71
COPB2-212ENST00000514508 MAGI2Q86UL8 1455 aa19.46■□□□□ 0.71
COPB2-212ENST00000514508 SAMD9LQ8IVG5 1584 aa19.45■□□□□ 0.7
COPB2-212ENST00000514508 ZNF777Q9ULD5 760 aaPredicted RBP19.45■□□□□ 0.7
COPB2-212ENST00000514508 PLEKHH2Q8IVE3 1493 aa19.43■□□□□ 0.7
COPB2-212ENST00000514508 ARHGEF40Q8TER5 1519 aa19.42■□□□□ 0.7
COPB2-212ENST00000514508 ARHGEF12Q9NZN5 1544 aa19.42■□□□□ 0.7
COPB2-212ENST00000514508 KDM5CP41229 1560 aa19.42■□□□□ 0.7
COPB2-212ENST00000514508 ZFYVE16Q7Z3T8 1539 aa19.41■□□□□ 0.7
COPB2-212ENST00000514508 AFAP1Q8N556 730 aa19.41■□□□□ 0.7
COPB2-212ENST00000514508 KIAA1107Q9UPP5 1409 aa19.41■□□□□ 0.7
COPB2-212ENST00000514508 TRAPPC8Q9Y2L5 1435 aa19.39■□□□□ 0.69
COPB2-212ENST00000514508 SYCP2Q9BX26 1530 aa19.39■□□□□ 0.69
COPB2-212ENST00000514508 HECW2Q9P2P5 1572 aa19.37■□□□□ 0.69
COPB2-212ENST00000514508 YEATS2Q9ULM3 1422 aa19.37■□□□□ 0.69
COPB2-212ENST00000514508 MLH3Q9UHC1 1453 aa19.36■□□□□ 0.69
COPB2-212ENST00000514508 KDM4FA0A1W2PPD8 638 aa19.36■□□□□ 0.69
COPB2-212ENST00000514508 HNRNPMP52272 730 aaKnown RBP eCLIP19.36■□□□□ 0.69
COPB2-212ENST00000514508 ZNF644Q9H582 1327 aaPredicted RBP19.34■□□□□ 0.69
COPB2-212ENST00000514508 MYT1LQ9UL68 1186 aa19.34■□□□□ 0.69
COPB2-212ENST00000514508 MYOM3Q5VTT5 1437 aa19.34■□□□□ 0.69
COPB2-212ENST00000514508 ATP10AO60312 1499 aa19.33■□□□□ 0.68
COPB2-212ENST00000514508 CAMSAP2Q08AD1 1489 aa19.32■□□□□ 0.68
COPB2-212ENST00000514508 MIA2Q96PC5 1412 aa19.32■□□□□ 0.68
COPB2-212ENST00000514508 KIDINS220Q9ULH0 1771 aa19.32■□□□□ 0.68
COPB2-212ENST00000514508 MBD5Q9P267 1494 aa19.31■□□□□ 0.68
COPB2-212ENST00000514508 ARID4BQ4LE39 1312 aaPredicted RBP19.3■□□□□ 0.68
COPB2-212ENST00000514508 C9orf84Q5VXU9 1444 aa19.3■□□□□ 0.68
COPB2-212ENST00000514508 DIP2CQ9Y2E4 1556 aa19.3■□□□□ 0.68
COPB2-212ENST00000514508 SPAG9O60271 1321 aaKnown RBP19.29■□□□□ 0.68
COPB2-212ENST00000514508 RSPH4AQ5TD94 716 aa19.29■□□□□ 0.68
COPB2-212ENST00000514508 ABCA6Q8N139 1617 aa19.29■□□□□ 0.68
COPB2-212ENST00000514508 BCORL1Q5H9F3 1711 aa19.28■□□□□ 0.68
COPB2-212ENST00000514508 REREQ9P2R6 1566 aa19.27■□□□□ 0.67
COPB2-212ENST00000514508 ATP7AQ04656 1500 aa19.26■□□□□ 0.67
COPB2-212ENST00000514508 SIGLEC1Q9BZZ2 1709 aa19.26■□□□□ 0.67
COPB2-212ENST00000514508 CCDC141Q6ZP82 1450 aa19.26■□□□□ 0.67
COPB2-212ENST00000514508 ARHGEF5Q12774 1597 aa19.26■□□□□ 0.67
COPB2-212ENST00000514508 INO80Q9ULG1 1556 aaPredicted RBP19.26■□□□□ 0.67
COPB2-212ENST00000514508 ADAMTSL3P82987 1691 aa19.25■□□□□ 0.67
COPB2-212ENST00000514508 RTEL1-TNFRSF6BF6WH68 1400 aa19.23■□□□□ 0.67
COPB2-212ENST00000514508 PTPN23Q9H3S7 1636 aa19.22■□□□□ 0.67
COPB2-212ENST00000514508 FGD6Q6ZV73 1430 aa19.22■□□□□ 0.67
COPB2-212ENST00000514508 TSPY4P0CV99 314 aa19.2■□□□□ 0.66
COPB2-212ENST00000514508 TSPY10P0CW01 314 aa19.2■□□□□ 0.66
COPB2-212ENST00000514508 ADGBQ8N7X0 1667 aa19.2■□□□□ 0.66
COPB2-212ENST00000514508 AGLP35573 1532 aa19.2■□□□□ 0.66
COPB2-212ENST00000514508 MADDQ8WXG6 1647 aa19.18■□□□□ 0.66
COPB2-212ENST00000514508 TCOF1Q13428 1488 aaKnown RBP19.18■□□□□ 0.66
COPB2-212ENST00000514508 A2MP01023 1474 aa19.16■□□□□ 0.66
COPB2-212ENST00000514508 MAST1Q9Y2H9 1570 aa19.16■□□□□ 0.66
COPB2-212ENST00000514508 MLECQ14165 292 aa19.16■□□□□ 0.66
COPB2-212ENST00000514508 FER1L4A9Z1Z3 1794 aa19.15■□□□□ 0.66
COPB2-212ENST00000514508 PLXNC1O60486 1568 aa19.15■□□□□ 0.66
COPB2-212ENST00000514508 RIMS1Q86UR5 1692 aaKnown RBP19.14■□□□□ 0.65
COPB2-212ENST00000514508 PTPRMP28827 1452 aa19.13■□□□□ 0.65
COPB2-212ENST00000514508 CROCC2H7BZ55 1655 aa19.12■□□□□ 0.65
COPB2-212ENST00000514508 DNMT1P26358 1616 aaKnown RBP19.12■□□□□ 0.65
COPB2-212ENST00000514508 PPARGC1BQ86YN6 1023 aaKnown RBP19.12■□□□□ 0.65
COPB2-212ENST00000514508 ABCC5O15440 1437 aa19.11■□□□□ 0.65
COPB2-212ENST00000514508 SHANK2Q9UPX8 1470 aa19.1■□□□□ 0.65
COPB2-212ENST00000514508 DAPK1P53355 1430 aa19.1■□□□□ 0.65
COPB2-212ENST00000514508 DHX29Q7Z478 1369 aaKnown RBP19.1■□□□□ 0.65
COPB2-212ENST00000514508 FAM50AQ14320 339 aaKnown RBP19.08■□□□□ 0.64
COPB2-212ENST00000514508 ESF1Q9H501 851 aaKnown RBP19.05■□□□□ 0.64
COPB2-212ENST00000514508 CNTLNQ9NXG0 1405 aa19.03■□□□□ 0.64
COPB2-212ENST00000514508 KIF3BO15066 747 aa19.02■□□□□ 0.64
COPB2-212ENST00000514508 GGT6Q6P531 493 aa19.02■□□□□ 0.64
COPB2-212ENST00000514508 PPP6R1Q9UPN7 881 aa19.02■□□□□ 0.64
COPB2-212ENST00000514508 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.02■□□□□ 0.64
COPB2-212ENST00000514508 DUOX2Q9NRD8 1548 aa19.01■□□□□ 0.63
COPB2-212ENST00000514508 EIF2AK4Q9P2K8 1649 aaKnown RBP19■□□□□ 0.63
COPB2-212ENST00000514508 ANKRD30AQ9BXX3 1397 aa19■□□□□ 0.63
COPB2-212ENST00000514508 MROH2AA6NES4 1674 aa18.99■□□□□ 0.63
COPB2-212ENST00000514508 KIF15Q9NS87 1388 aa18.99■□□□□ 0.63
COPB2-212ENST00000514508 CHIC2Q9UKJ5 165 aa18.99■□□□□ 0.63
COPB2-212ENST00000514508 ADGRL2O95490 1459 aa18.98■□□□□ 0.63
COPB2-212ENST00000514508 PLPPR3Q6T4P5 718 aa18.98■□□□□ 0.63
COPB2-212ENST00000514508 RRP7BPQ9NSQ0 103 aa18.98■□□□□ 0.63
COPB2-212ENST00000514508 NCOA1Q15788 1441 aa18.98■□□□□ 0.63
COPB2-212ENST00000514508 RRBP1Q9P2E9 1410 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms