RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 ITSN2Q9NZM3 1697 aa14.26□□□□□ -0.13
DHFR-206ENST00000513048 TTC37Q6PGP7 1564 aa14.26□□□□□ -0.13
DHFR-206ENST00000513048 ASXL2Q76L83 1435 aa14.26□□□□□ -0.13
DHFR-206ENST00000513048 CYB5RLQ6IPT4 315 aa14.26□□□□□ -0.13
DHFR-206ENST00000513048 PREX2Q70Z35 1606 aa14.23□□□□□ -0.13
DHFR-206ENST00000513048 MAPKBP1O60336 1514 aa14.22□□□□□ -0.13
DHFR-206ENST00000513048 CDC42BPBQ9Y5S2 1711 aa14.22□□□□□ -0.13
DHFR-206ENST00000513048 ABCA9Q8IUA7 1624 aa14.21□□□□□ -0.13
DHFR-206ENST00000513048 NPM1P06748 294 aaKnown RBP eCLIP14.2□□□□□ -0.14
DHFR-206ENST00000513048 FAM50AQ14320 339 aaKnown RBP14.2□□□□□ -0.14
DHFR-206ENST00000513048 MYO5CQ9NQX4 1742 aa14.2□□□□□ -0.14
DHFR-206ENST00000513048 KCNH8Q96L42 1107 aa14.19□□□□□ -0.14
DHFR-206ENST00000513048 CAMSAP2Q08AD1 1489 aa14.18□□□□□ -0.14
DHFR-206ENST00000513048 ZNF644Q9H582 1327 aaPredicted RBP14.18□□□□□ -0.14
DHFR-206ENST00000513048 PTPRKQ15262 1439 aa14.18□□□□□ -0.14
DHFR-206ENST00000513048 CFDP1Q9UEE9 299 aaPredicted RBP14.18□□□□□ -0.14
DHFR-206ENST00000513048 PLCH2O75038 1416 aa14.17□□□□□ -0.14
DHFR-206ENST00000513048 ARAP3Q8WWN8 1544 aa14.17□□□□□ -0.14
DHFR-206ENST00000513048 SAMD9LQ8IVG5 1584 aa14.16□□□□□ -0.14
DHFR-206ENST00000513048 DNMT1P26358 1616 aaKnown RBP14.15□□□□□ -0.14
DHFR-206ENST00000513048 CNKSR2Q8WXI2 1034 aa14.15□□□□□ -0.14
DHFR-206ENST00000513048 ABCC5O15440 1437 aa14.14□□□□□ -0.15
DHFR-206ENST00000513048 ARHGAP5Q13017 1502 aa14.13□□□□□ -0.15
DHFR-206ENST00000513048 DAPK1P53355 1430 aa14.13□□□□□ -0.15
DHFR-206ENST00000513048 GLI2P10070 1586 aa14.13□□□□□ -0.15
DHFR-206ENST00000513048 ITGAEP38570 1179 aa14.12□□□□□ -0.15
DHFR-206ENST00000513048 MBD5Q9P267 1494 aa14.12□□□□□ -0.15
DHFR-206ENST00000513048 CROCC2H7BZ55 1655 aa14.11□□□□□ -0.15
DHFR-206ENST00000513048 ARHGEF5Q12774 1597 aa14.11□□□□□ -0.15
DHFR-206ENST00000513048 DNAJC5Q9H3Z4 198 aa14.11□□□□□ -0.15
DHFR-206ENST00000513048 ZNF777Q9ULD5 760 aaPredicted RBP14.1□□□□□ -0.15
DHFR-206ENST00000513048 DIP2BQ9P265 1576 aa14.09□□□□□ -0.15
DHFR-206ENST00000513048 KIAA1107Q9UPP5 1409 aa14.09□□□□□ -0.15
DHFR-206ENST00000513048 MAP3K4Q9Y6R4 1608 aa14.09□□□□□ -0.15
DHFR-206ENST00000513048 ARHGEF12Q9NZN5 1544 aa14.09□□□□□ -0.15
DHFR-206ENST00000513048 PLEKHH2Q8IVE3 1493 aa14.08□□□□□ -0.16
DHFR-206ENST00000513048 ABCC1P33527 1531 aa14.08□□□□□ -0.16
DHFR-206ENST00000513048 AKNAQ7Z591 1439 aa14.07□□□□□ -0.16
DHFR-206ENST00000513048 SYCP2Q9BX26 1530 aa14.07□□□□□ -0.16
DHFR-206ENST00000513048 DCAF8L1A6NGE4 600 aa14.07□□□□□ -0.16
DHFR-206ENST00000513048 HOXD11P31277 338 aaPredicted RBP14.07□□□□□ -0.16
DHFR-206ENST00000513048 EFCAB2Q5VUJ9 269 aa14.07□□□□□ -0.16
DHFR-206ENST00000513048 HFM1A2PYH4 1435 aa14.07□□□□□ -0.16
DHFR-206ENST00000513048 CD109Q6YHK3 1445 aa14.07□□□□□ -0.16
DHFR-206ENST00000513048 SHANK2Q9UPX8 1470 aa14.06□□□□□ -0.16
DHFR-206ENST00000513048 ROCK1Q13464 1354 aa14.06□□□□□ -0.16
DHFR-206ENST00000513048 SETD5Q9C0A6 1442 aa14.06□□□□□ -0.16
DHFR-206ENST00000513048 FANCAO15360 1455 aa14.06□□□□□ -0.16
DHFR-206ENST00000513048 ADGRL2O95490 1459 aa14.06□□□□□ -0.16
DHFR-206ENST00000513048 GCC2Q8IWJ2 1684 aa14.05□□□□□ -0.16
DHFR-206ENST00000513048 HNRNPMP52272 730 aaKnown RBP eCLIP14.05□□□□□ -0.16
DHFR-206ENST00000513048 NAIPQ13075 1403 aa14.05□□□□□ -0.16
DHFR-206ENST00000513048 CCDC141Q6ZP82 1450 aa14.05□□□□□ -0.16
DHFR-206ENST00000513048 ADGBQ8N7X0 1667 aa14.04□□□□□ -0.16
DHFR-206ENST00000513048 MAST1Q9Y2H9 1570 aa14.04□□□□□ -0.16
DHFR-206ENST00000513048 RAB3GAP2Q9H2M9 1393 aa14.03□□□□□ -0.16
DHFR-206ENST00000513048 KIF13AQ9H1H9 1805 aa14.03□□□□□ -0.16
DHFR-206ENST00000513048 CFAP74Q9C0B2 1584 aa14.02□□□□□ -0.16
DHFR-206ENST00000513048 RSPH4AQ5TD94 716 aa14.02□□□□□ -0.17
DHFR-206ENST00000513048 CHIC2Q9UKJ5 165 aa14.02□□□□□ -0.17
DHFR-206ENST00000513048 PPRC1Q5VV67 1664 aaKnown RBP14.01□□□□□ -0.17
DHFR-206ENST00000513048 NCOA1Q15788 1441 aa14.01□□□□□ -0.17
DHFR-206ENST00000513048 C9orf84Q5VXU9 1444 aa14.01□□□□□ -0.17
DHFR-206ENST00000513048 TRAPPC8Q9Y2L5 1435 aa14.01□□□□□ -0.17
DHFR-206ENST00000513048 HRCP23327 699 aa14.01□□□□□ -0.17
DHFR-206ENST00000513048 RNF216Q9NWF9 866 aaPredicted RBP14□□□□□ -0.17
DHFR-206ENST00000513048 KDM6BO15054 1643 aa14□□□□□ -0.17
DHFR-206ENST00000513048 ADGRL1O94910 1474 aa13.99□□□□□ -0.17
DHFR-206ENST00000513048 NEO1Q92859 1461 aa13.99□□□□□ -0.17
DHFR-206ENST00000513048 FAM69CQ0P6D2 419 aa13.99□□□□□ -0.17
DHFR-206ENST00000513048 RRP7BPQ9NSQ0 103 aa13.99□□□□□ -0.17
DHFR-206ENST00000513048 SCAPERQ9BY12 1400 aa13.98□□□□□ -0.17
DHFR-206ENST00000513048 ANKRD30AQ9BXX3 1397 aa13.96□□□□□ -0.17
DHFR-206ENST00000513048 PLXNC1O60486 1568 aa13.96□□□□□ -0.17
DHFR-206ENST00000513048 DHX57Q6P158 1386 aaKnown RBP13.96□□□□□ -0.18
DHFR-206ENST00000513048 TSPY4P0CV99 314 aa13.95□□□□□ -0.18
DHFR-206ENST00000513048 TSPY10P0CW01 314 aa13.95□□□□□ -0.18
DHFR-206ENST00000513048 INO80Q9ULG1 1556 aaPredicted RBP13.95□□□□□ -0.18
DHFR-206ENST00000513048 RTEL1-TNFRSF6BF6WH68 1400 aa13.94□□□□□ -0.18
DHFR-206ENST00000513048 ZFYVE16Q7Z3T8 1539 aa13.94□□□□□ -0.18
DHFR-206ENST00000513048 KDM5CP41229 1560 aa13.93□□□□□ -0.18
DHFR-206ENST00000513048 POGZQ7Z3K3 1410 aa13.93□□□□□ -0.18
DHFR-206ENST00000513048 NCBP3Q53F19 620 aaKnown RBP13.93□□□□□ -0.18
DHFR-206ENST00000513048 AFAP1Q8N556 730 aa13.93□□□□□ -0.18
DHFR-206ENST00000513048 TSPOAP1O95153 1857 aa13.93□□□□□ -0.18
DHFR-206ENST00000513048 RICTORQ6R327 1708 aa13.91□□□□□ -0.18
DHFR-206ENST00000513048 KIF15Q9NS87 1388 aa13.91□□□□□ -0.18
DHFR-206ENST00000513048 ZNF518AQ6AHZ1 1483 aa13.91□□□□□ -0.18
DHFR-206ENST00000513048 TEX14Q8IWB6 1497 aa13.91□□□□□ -0.18
DHFR-206ENST00000513048 ATP7AQ04656 1500 aa13.9□□□□□ -0.18
DHFR-206ENST00000513048 CCER1Q8TC90 406 aaPredicted RBP13.9□□□□□ -0.18
DHFR-206ENST00000513048 FRMPD1Q5SYB0 1578 aa13.9□□□□□ -0.18
DHFR-206ENST00000513048 KIDINS220Q9ULH0 1771 aa13.9□□□□□ -0.18
DHFR-206ENST00000513048 ANKRD50Q9ULJ7 1429 aa13.9□□□□□ -0.19
DHFR-206ENST00000513048 SPAG9O60271 1321 aaKnown RBP13.9□□□□□ -0.19
DHFR-206ENST00000513048 DENND4BO75064 1496 aaPredicted RBP13.89□□□□□ -0.19
DHFR-206ENST00000513048 MLH3Q9UHC1 1453 aa13.88□□□□□ -0.19
DHFR-206ENST00000513048 DUOX2Q9NRD8 1548 aa13.88□□□□□ -0.19
DHFR-206ENST00000513048 HECW2Q9P2P5 1572 aa13.86□□□□□ -0.19
DHFR-206ENST00000513048 ERBINQ96RT1 1412 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms