RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 TRIM52Q96A61 297 aa11.67□□□□□ -0.54
CLDND1-225ENST00000512147 DENND4BO75064 1496 aaPredicted RBP11.66□□□□□ -0.54
CLDND1-225ENST00000512147 TRAPPC8Q9Y2L5 1435 aa11.66□□□□□ -0.54
CLDND1-225ENST00000512147 SIGLEC1Q9BZZ2 1709 aa11.66□□□□□ -0.54
CLDND1-225ENST00000512147 CPS1P31327 1500 aa11.65□□□□□ -0.55
CLDND1-225ENST00000512147 ZFYVE16Q7Z3T8 1539 aa11.64□□□□□ -0.55
CLDND1-225ENST00000512147 EFCAB5A4FU69 1503 aa11.63□□□□□ -0.55
CLDND1-225ENST00000512147 FHOD3Q2V2M9 1422 aa11.62□□□□□ -0.55
CLDND1-225ENST00000512147 ESF1Q9H501 851 aaKnown RBP11.62□□□□□ -0.55
CLDND1-225ENST00000512147 DISP1Q96F81 1524 aa11.61□□□□□ -0.55
CLDND1-225ENST00000512147 MAGI2Q86UL8 1455 aa11.6□□□□□ -0.55
CLDND1-225ENST00000512147 ALKQ9UM73 1620 aa11.59□□□□□ -0.55
CLDND1-225ENST00000512147 ABCA9Q8IUA7 1624 aa11.58□□□□□ -0.56
CLDND1-225ENST00000512147 RICTORQ6R327 1708 aa11.57□□□□□ -0.56
CLDND1-225ENST00000512147 IQGAP2Q13576 1575 aa11.57□□□□□ -0.56
CLDND1-225ENST00000512147 SHANK2Q9UPX8 1470 aa11.57□□□□□ -0.56
CLDND1-225ENST00000512147 YY1P25490 414 aa11.56□□□□□ -0.56
CLDND1-225ENST00000512147 SETBP1Q9Y6X0 1596 aa11.56□□□□□ -0.56
CLDND1-225ENST00000512147 ZMYM4Q5VZL5 1548 aa11.55□□□□□ -0.56
CLDND1-225ENST00000512147 ZNF772Q68DY9 489 aaPredicted RBP11.55□□□□□ -0.56
CLDND1-225ENST00000512147 ATP10AO60312 1499 aa11.55□□□□□ -0.56
CLDND1-225ENST00000512147 PLA2R1Q13018 1463 aa11.55□□□□□ -0.56
CLDND1-225ENST00000512147 RXRBP28702 533 aa11.54□□□□□ -0.56
CLDND1-225ENST00000512147 C3P01024 1663 aa11.54□□□□□ -0.56
CLDND1-225ENST00000512147 SENP3-EIF4A1A0A087X0R7 540 aa11.53□□□□□ -0.56
CLDND1-225ENST00000512147 C9orf84Q5VXU9 1444 aa11.52□□□□□ -0.56
CLDND1-225ENST00000512147 TCOF1Q13428 1488 aaKnown RBP11.52□□□□□ -0.56
CLDND1-225ENST00000512147 RAPGEF2Q9Y4G8 1499 aa11.52□□□□□ -0.56
CLDND1-225ENST00000512147 IGF1RP08069 1367 aa11.51□□□□□ -0.57
CLDND1-225ENST00000512147 ARID3CA6NKF2 412 aa11.49□□□□□ -0.57
CLDND1-225ENST00000512147 LRRC7Q96NW7 1537 aa11.49□□□□□ -0.57
CLDND1-225ENST00000512147 BIVM-ERCC5R4GMW8 1640 aa11.49□□□□□ -0.57
CLDND1-225ENST00000512147 HECW1Q76N89 1606 aa11.47□□□□□ -0.57
CLDND1-225ENST00000512147 NPATQ14207 1427 aa11.46□□□□□ -0.57
CLDND1-225ENST00000512147 FAM9AQ8IZU1 332 aaPredicted RBP11.45□□□□□ -0.58
CLDND1-225ENST00000512147 ABCA8O94911 1581 aa11.45□□□□□ -0.58
CLDND1-225ENST00000512147 CDK12Q9NYV4 1490 aaPredicted RBP11.44□□□□□ -0.58
CLDND1-225ENST00000512147 NUTM2BA6NNL0 878 aaPredicted RBP11.44□□□□□ -0.58
CLDND1-225ENST00000512147 NUTM2EB1AL46 878 aaPredicted RBP11.44□□□□□ -0.58
CLDND1-225ENST00000512147 MEX3CQ5U5Q3 659 aaKnown RBP11.44□□□□□ -0.58
CLDND1-225ENST00000512147 NUTM2DQ5VT03 806 aaPredicted RBP11.44□□□□□ -0.58
CLDND1-225ENST00000512147 NUTM2AQ8IVF1 878 aaPredicted RBP11.44□□□□□ -0.58
CLDND1-225ENST00000512147 UGGT2Q9NYU1 1516 aa11.44□□□□□ -0.58
CLDND1-225ENST00000512147 SUPT6HQ7KZ85 1726 aaKnown RBP11.43□□□□□ -0.58
CLDND1-225ENST00000512147 CNTLNQ9NXG0 1405 aa11.42□□□□□ -0.58
CLDND1-225ENST00000512147 CARMIL1Q5VZK9 1371 aa11.41□□□□□ -0.58
CLDND1-225ENST00000512147 RNF17Q9BXT8 1623 aaKnown RBP11.41□□□□□ -0.58
CLDND1-225ENST00000512147 FAM135BQ49AJ0 1406 aa11.41□□□□□ -0.58
CLDND1-225ENST00000512147 CFAP74Q9C0B2 1584 aa11.41□□□□□ -0.58
CLDND1-225ENST00000512147 ATP10BO94823 1461 aa11.4□□□□□ -0.58
CLDND1-225ENST00000512147 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.4□□□□□ -0.58
CLDND1-225ENST00000512147 HNRNPUL2Q1KMD3 747 aaKnown RBP11.4□□□□□ -0.58
CLDND1-225ENST00000512147 MYT1LQ9UL68 1186 aa11.39□□□□□ -0.59
CLDND1-225ENST00000512147 SCAPERQ9BY12 1400 aa11.37□□□□□ -0.59
CLDND1-225ENST00000512147 LRP5O75197 1615 aa11.37□□□□□ -0.59
CLDND1-225ENST00000512147 VWDEQ8N2E2 1590 aa11.37□□□□□ -0.59
CLDND1-225ENST00000512147 ZMYM3Q14202 1370 aa11.36□□□□□ -0.59
CLDND1-225ENST00000512147 ATAD2Q6PL18 1390 aa11.36□□□□□ -0.59
CLDND1-225ENST00000512147 JCADQ9P266 1359 aa11.36□□□□□ -0.59
CLDND1-225ENST00000512147 CEP170BQ9Y4F5 1589 aaPredicted RBP11.36□□□□□ -0.59
CLDND1-225ENST00000512147 SLC34A2O95436 690 aa11.35□□□□□ -0.59
CLDND1-225ENST00000512147 ZNF142P52746 1687 aaPredicted RBP11.35□□□□□ -0.59
CLDND1-225ENST00000512147 RAPGEF6Q8TEU7 1601 aa11.35□□□□□ -0.59
CLDND1-225ENST00000512147 KIF27Q86VH2 1401 aa11.35□□□□□ -0.59
CLDND1-225ENST00000512147 ANKLE2Q86XL3 938 aa11.34□□□□□ -0.59
CLDND1-225ENST00000512147 CCDC125Q86Z20 511 aa11.34□□□□□ -0.59
CLDND1-225ENST00000512147 AGLP35573 1532 aa11.34□□□□□ -0.59
CLDND1-225ENST00000512147 PCDH10Q9P2E7 1040 aa11.33□□□□□ -0.6
CLDND1-225ENST00000512147 SPATA31A6Q5VVP1 1343 aa11.32□□□□□ -0.6
CLDND1-225ENST00000512147 MYO3AQ8NEV4 1616 aa11.31□□□□□ -0.6
CLDND1-225ENST00000512147 GOLGA3Q08378 1498 aa11.31□□□□□ -0.6
CLDND1-225ENST00000512147 C1QTNF8P60827 252 aa11.3□□□□□ -0.6
CLDND1-225ENST00000512147 RGS12O14924 1447 aa11.29□□□□□ -0.6
CLDND1-225ENST00000512147 RBM6P78332 1123 aaKnown RBP11.29□□□□□ -0.6
CLDND1-225ENST00000512147 POLR1AO95602 1720 aaPredicted RBP11.29□□□□□ -0.6
CLDND1-225ENST00000512147 NEURL4Q96JN8 1562 aa11.28□□□□□ -0.6
CLDND1-225ENST00000512147 CDK13Q14004 1512 aaKnown RBP11.28□□□□□ -0.6
CLDND1-225ENST00000512147 SYNMO15061 1565 aa11.28□□□□□ -0.6
CLDND1-225ENST00000512147 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.28□□□□□ -0.6
CLDND1-225ENST00000512147 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.27□□□□□ -0.61
CLDND1-225ENST00000512147 PLEKHD1A6NEE1 506 aa11.27□□□□□ -0.61
CLDND1-225ENST00000512147 A2ML1A8K2U0 1454 aa11.26□□□□□ -0.61
CLDND1-225ENST00000512147 DCAF8L1A6NGE4 600 aa11.26□□□□□ -0.61
CLDND1-225ENST00000512147 NPHP4O75161 1426 aaPredicted RBP11.26□□□□□ -0.61
CLDND1-225ENST00000512147 REREQ9P2R6 1566 aa11.25□□□□□ -0.61
CLDND1-225ENST00000512147 LRP6O75581 1613 aa11.25□□□□□ -0.61
CLDND1-225ENST00000512147 MROH2AA6NES4 1674 aa11.25□□□□□ -0.61
CLDND1-225ENST00000512147 NGLY1Q96IV0 654 aa11.25□□□□□ -0.61
CLDND1-225ENST00000512147 QTRT2Q9H974 415 aaKnown RBP11.25□□□□□ -0.61
CLDND1-225ENST00000512147 AFAP1Q8N556 730 aa11.24□□□□□ -0.61
CLDND1-225ENST00000512147 DNMT1P26358 1616 aaKnown RBP11.24□□□□□ -0.61
CLDND1-225ENST00000512147 AFF2P51816 1311 aa11.23□□□□□ -0.61
CLDND1-225ENST00000512147 ROBO1Q9Y6N7 1651 aa11.23□□□□□ -0.61
CLDND1-225ENST00000512147 THEMISQ8N1K5 641 aaPredicted RBP11.22□□□□□ -0.61
CLDND1-225ENST00000512147 STRCP1A6NGW2 1772 aa11.21□□□□□ -0.61
CLDND1-225ENST00000512147 DIP2CQ9Y2E4 1556 aa11.21□□□□□ -0.61
CLDND1-225ENST00000512147 ZNF518AQ6AHZ1 1483 aa11.21□□□□□ -0.61
CLDND1-225ENST00000512147 HRCP23327 699 aa11.21□□□□□ -0.61
CLDND1-225ENST00000512147 ZNF784Q8NCA9 323 aaPredicted RBP11.21□□□□□ -0.61
CLDND1-225ENST00000512147 MED14O60244 1454 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms