RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 PLCH2O75038 1416 aa16.28■□□□□ 0.2
NR1I3-227ENST00000510951 ARAP3Q8WWN8 1544 aa16.27■□□□□ 0.2
NR1I3-227ENST00000510951 CCNB3Q8WWL7 1395 aa16.26■□□□□ 0.19
NR1I3-227ENST00000510951 GPATCH8Q9UKJ3 1502 aaKnown RBP16.25■□□□□ 0.19
NR1I3-227ENST00000510951 NEO1Q92859 1461 aa16.25■□□□□ 0.19
NR1I3-227ENST00000510951 PHF23Q9BUL5 403 aaPredicted RBP16.25■□□□□ 0.19
NR1I3-227ENST00000510951 SAMD9LQ8IVG5 1584 aa16.23■□□□□ 0.19
NR1I3-227ENST00000510951 PPARGC1BQ86YN6 1023 aaKnown RBP16.23■□□□□ 0.19
NR1I3-227ENST00000510951 AKNAQ7Z591 1439 aa16.22■□□□□ 0.19
NR1I3-227ENST00000510951 ABCC1P33527 1531 aa16.21■□□□□ 0.19
NR1I3-227ENST00000510951 RICTORQ6R327 1708 aa16.21■□□□□ 0.19
NR1I3-227ENST00000510951 ADGRL1O94910 1474 aa16.21■□□□□ 0.19
NR1I3-227ENST00000510951 FRMPD1Q5SYB0 1578 aa16.21■□□□□ 0.18
NR1I3-227ENST00000510951 COL17A1Q9UMD9 1497 aaPredicted RBP16.2■□□□□ 0.18
NR1I3-227ENST00000510951 SYCP2Q9BX26 1530 aa16.19■□□□□ 0.18
NR1I3-227ENST00000510951 PHLDB1Q86UU1 1377 aa16.18■□□□□ 0.18
NR1I3-227ENST00000510951 EFCAB2Q5VUJ9 269 aa16.18■□□□□ 0.18
NR1I3-227ENST00000510951 CFDP1Q9UEE9 299 aaPredicted RBP16.18■□□□□ 0.18
NR1I3-227ENST00000510951 ZNF777Q9ULD5 760 aaPredicted RBP16.18■□□□□ 0.18
NR1I3-227ENST00000510951 MYOM3Q5VTT5 1437 aa16.18■□□□□ 0.18
NR1I3-227ENST00000510951 CAMSAP2Q08AD1 1489 aa16.16■□□□□ 0.18
NR1I3-227ENST00000510951 DENND4BO75064 1496 aaPredicted RBP16.16■□□□□ 0.18
NR1I3-227ENST00000510951 PTPN23Q9H3S7 1636 aa16.16■□□□□ 0.18
NR1I3-227ENST00000510951 SCAPERQ9BY12 1400 aa16.15■□□□□ 0.18
NR1I3-227ENST00000510951 SENP3Q9H4L4 574 aaPredicted RBP16.15■□□□□ 0.18
NR1I3-227ENST00000510951 ARHGEF12Q9NZN5 1544 aa16.14■□□□□ 0.18
NR1I3-227ENST00000510951 POGZQ7Z3K3 1410 aa16.13■□□□□ 0.17
NR1I3-227ENST00000510951 ZNF644Q9H582 1327 aaPredicted RBP16.13■□□□□ 0.17
NR1I3-227ENST00000510951 RAPGEF3O95398 923 aa16.12■□□□□ 0.17
NR1I3-227ENST00000510951 FGD6Q6ZV73 1430 aa16.11■□□□□ 0.17
NR1I3-227ENST00000510951 PLEKHH2Q8IVE3 1493 aa16.11■□□□□ 0.17
NR1I3-227ENST00000510951 MIA2Q96PC5 1412 aa16.11■□□□□ 0.17
NR1I3-227ENST00000510951 ZMYM4Q5VZL5 1548 aa16.1■□□□□ 0.17
NR1I3-227ENST00000510951 KDM5CP41229 1560 aa16.1■□□□□ 0.17
NR1I3-227ENST00000510951 TRAPPC8Q9Y2L5 1435 aa16.1■□□□□ 0.17
NR1I3-227ENST00000510951 ZNF518AQ6AHZ1 1483 aa16.1■□□□□ 0.17
NR1I3-227ENST00000510951 HECW2Q9P2P5 1572 aa16.09■□□□□ 0.17
NR1I3-227ENST00000510951 ARHGEF40Q8TER5 1519 aa16.08■□□□□ 0.16
NR1I3-227ENST00000510951 CROCC2H7BZ55 1655 aa16.08■□□□□ 0.16
NR1I3-227ENST00000510951 HNRNPMP52272 730 aaKnown RBP eCLIP16.07■□□□□ 0.16
NR1I3-227ENST00000510951 KIAA1107Q9UPP5 1409 aa16.07■□□□□ 0.16
NR1I3-227ENST00000510951 ARHGEF5Q12774 1597 aa16.06■□□□□ 0.16
NR1I3-227ENST00000510951 ZFYVE16Q7Z3T8 1539 aa16.06■□□□□ 0.16
NR1I3-227ENST00000510951 TCOF1Q13428 1488 aaKnown RBP16.06■□□□□ 0.16
NR1I3-227ENST00000510951 KIDINS220Q9ULH0 1771 aa16.05■□□□□ 0.16
NR1I3-227ENST00000510951 INO80Q9ULG1 1556 aaPredicted RBP16.05■□□□□ 0.16
NR1I3-227ENST00000510951 CCDC141Q6ZP82 1450 aa16.05■□□□□ 0.16
NR1I3-227ENST00000510951 MBD5Q9P267 1494 aa16.05■□□□□ 0.16
NR1I3-227ENST00000510951 ABCA6Q8N139 1617 aa16.05■□□□□ 0.16
NR1I3-227ENST00000510951 AFAP1Q8N556 730 aa16.04■□□□□ 0.16
NR1I3-227ENST00000510951 DNMT1P26358 1616 aaKnown RBP16.04■□□□□ 0.16
NR1I3-227ENST00000510951 ATP7AQ04656 1500 aa16.02■□□□□ 0.15
NR1I3-227ENST00000510951 YEATS2Q9ULM3 1422 aa16.02■□□□□ 0.15
NR1I3-227ENST00000510951 DIP2CQ9Y2E4 1556 aa16.01■□□□□ 0.15
NR1I3-227ENST00000510951 FAM50AQ14320 339 aaKnown RBP16.01■□□□□ 0.15
NR1I3-227ENST00000510951 MYT1LQ9UL68 1186 aa16.01■□□□□ 0.15
NR1I3-227ENST00000510951 ADGBQ8N7X0 1667 aa16■□□□□ 0.15
NR1I3-227ENST00000510951 SIGLEC1Q9BZZ2 1709 aa15.99■□□□□ 0.15
NR1I3-227ENST00000510951 MAGI2Q86UL8 1455 aa15.99■□□□□ 0.15
NR1I3-227ENST00000510951 MLH3Q9UHC1 1453 aa15.99■□□□□ 0.15
NR1I3-227ENST00000510951 DAPK1P53355 1430 aa15.98■□□□□ 0.15
NR1I3-227ENST00000510951 MAST1Q9Y2H9 1570 aa15.98■□□□□ 0.15
NR1I3-227ENST00000510951 SPAG9O60271 1321 aaKnown RBP15.97■□□□□ 0.15
NR1I3-227ENST00000510951 RRBP1Q9P2E9 1410 aaKnown RBP15.97■□□□□ 0.15
NR1I3-227ENST00000510951 ABCC5O15440 1437 aa15.96■□□□□ 0.15
NR1I3-227ENST00000510951 C9orf84Q5VXU9 1444 aa15.95■□□□□ 0.14
NR1I3-227ENST00000510951 SHANK2Q9UPX8 1470 aa15.95■□□□□ 0.14
NR1I3-227ENST00000510951 PLXNC1O60486 1568 aa15.94■□□□□ 0.14
NR1I3-227ENST00000510951 ATP10AO60312 1499 aa15.92■□□□□ 0.14
NR1I3-227ENST00000510951 RSPH4AQ5TD94 716 aa15.92■□□□□ 0.14
NR1I3-227ENST00000510951 RTEL1-TNFRSF6BF6WH68 1400 aa15.92■□□□□ 0.14
NR1I3-227ENST00000510951 TSPY4P0CV99 314 aa15.91■□□□□ 0.14
NR1I3-227ENST00000510951 TSPY10P0CW01 314 aa15.91■□□□□ 0.14
NR1I3-227ENST00000510951 ITGAEP38570 1179 aa15.91■□□□□ 0.14
NR1I3-227ENST00000510951 REREQ9P2R6 1566 aa15.91■□□□□ 0.14
NR1I3-227ENST00000510951 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.89■□□□□ 0.13
NR1I3-227ENST00000510951 CHIC2Q9UKJ5 165 aa15.89■□□□□ 0.13
NR1I3-227ENST00000510951 A2MP01023 1474 aa15.89■□□□□ 0.13
NR1I3-227ENST00000510951 BCORL1Q5H9F3 1711 aa15.88■□□□□ 0.13
NR1I3-227ENST00000510951 PTPRKQ15262 1439 aa15.88■□□□□ 0.13
NR1I3-227ENST00000510951 ARID4BQ4LE39 1312 aaPredicted RBP15.87■□□□□ 0.13
NR1I3-227ENST00000510951 ADGRL2O95490 1459 aa15.86■□□□□ 0.13
NR1I3-227ENST00000510951 FER1L4A9Z1Z3 1794 aa15.85■□□□□ 0.13
NR1I3-227ENST00000510951 KIF15Q9NS87 1388 aa15.85■□□□□ 0.13
NR1I3-227ENST00000510951 DUOX2Q9NRD8 1548 aa15.84■□□□□ 0.13
NR1I3-227ENST00000510951 ANKRD30AQ9BXX3 1397 aa15.84■□□□□ 0.13
NR1I3-227ENST00000510951 AGLP35573 1532 aa15.84■□□□□ 0.13
NR1I3-227ENST00000510951 EIF2AK4Q9P2K8 1649 aaKnown RBP15.83■□□□□ 0.13
NR1I3-227ENST00000510951 RRP7BPQ9NSQ0 103 aa15.83■□□□□ 0.12
NR1I3-227ENST00000510951 MADDQ8WXG6 1647 aa15.82■□□□□ 0.12
NR1I3-227ENST00000510951 ADAMTSL3P82987 1691 aa15.82■□□□□ 0.12
NR1I3-227ENST00000510951 GCC2Q8IWJ2 1684 aa15.82■□□□□ 0.12
NR1I3-227ENST00000510951 MLECQ14165 292 aa15.81■□□□□ 0.12
NR1I3-227ENST00000510951 NCOA1Q15788 1441 aa15.81■□□□□ 0.12
NR1I3-227ENST00000510951 RIMS1Q86UR5 1692 aaKnown RBP15.81■□□□□ 0.12
NR1I3-227ENST00000510951 DHX29Q7Z478 1369 aaKnown RBP15.8■□□□□ 0.12
NR1I3-227ENST00000510951 RNF17Q9BXT8 1623 aaKnown RBP15.79■□□□□ 0.12
NR1I3-227ENST00000510951 ERBINQ96RT1 1412 aa15.78■□□□□ 0.12
NR1I3-227ENST00000510951 ROCK1Q13464 1354 aa15.78■□□□□ 0.12
NR1I3-227ENST00000510951 CLTCQ00610 1675 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms