RNA–Protein interactions for RNA: ENST00000510638.1

NFKB1-209, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-209ENST00000510638 EHBP1L1Q8N3D4 1523 aa13.35□□□□□ -0.27
NFKB1-209ENST00000510638 PPARGC1BQ86YN6 1023 aaKnown RBP13.35□□□□□ -0.27
NFKB1-209ENST00000510638 WDR7Q9Y4E6 1490 aa13.35□□□□□ -0.27
NFKB1-209ENST00000510638 RIMS1Q86UR5 1692 aaKnown RBP13.34□□□□□ -0.27
NFKB1-209ENST00000510638 ARAP3Q8WWN8 1544 aa13.34□□□□□ -0.27
NFKB1-209ENST00000510638 KCNH8Q96L42 1107 aa13.33□□□□□ -0.28
NFKB1-209ENST00000510638 LRRIQ1Q96JM4 1722 aa13.29□□□□□ -0.28
NFKB1-209ENST00000510638 CD109Q6YHK3 1445 aa13.29□□□□□ -0.28
NFKB1-209ENST00000510638 KIF14Q15058 1648 aa13.28□□□□□ -0.28
NFKB1-209ENST00000510638 CCNB3Q8WWL7 1395 aa13.28□□□□□ -0.28
NFKB1-209ENST00000510638 NCOA2Q15596 1464 aa13.28□□□□□ -0.28
NFKB1-209ENST00000510638 PREX1Q8TCU6 1659 aa13.26□□□□□ -0.29
NFKB1-209ENST00000510638 SUPT6HQ7KZ85 1726 aaKnown RBP13.25□□□□□ -0.29
NFKB1-209ENST00000510638 PHLDB1Q86UU1 1377 aa13.23□□□□□ -0.29
NFKB1-209ENST00000510638 CFDP1Q9UEE9 299 aaPredicted RBP13.23□□□□□ -0.29
NFKB1-209ENST00000510638 IQSEC2Q5JU85 1478 aa13.23□□□□□ -0.29
NFKB1-209ENST00000510638 MYOM3Q5VTT5 1437 aa13.22□□□□□ -0.29
NFKB1-209ENST00000510638 STRCQ7RTU9 1775 aa13.22□□□□□ -0.29
NFKB1-209ENST00000510638 FER1L4A9Z1Z3 1794 aa13.22□□□□□ -0.29
NFKB1-209ENST00000510638 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.21□□□□□ -0.29
NFKB1-209ENST00000510638 SETD1BQ9UPS6 1966 aaKnown RBP13.21□□□□□ -0.29
NFKB1-209ENST00000510638 EFCAB2Q5VUJ9 269 aa13.2□□□□□ -0.3
NFKB1-209ENST00000510638 PLCH2O75038 1416 aa13.2□□□□□ -0.3
NFKB1-209ENST00000510638 MIA2Q96PC5 1412 aa13.2□□□□□ -0.3
NFKB1-209ENST00000510638 GPATCH8Q9UKJ3 1502 aaKnown RBP13.19□□□□□ -0.3
NFKB1-209ENST00000510638 HSPA2P54652 639 aa13.19□□□□□ -0.3
NFKB1-209ENST00000510638 ARHGEF40Q8TER5 1519 aa13.18□□□□□ -0.3
NFKB1-209ENST00000510638 FGD6Q6ZV73 1430 aa13.18□□□□□ -0.3
NFKB1-209ENST00000510638 ABCA9Q8IUA7 1624 aa13.17□□□□□ -0.3
NFKB1-209ENST00000510638 TTC37Q6PGP7 1564 aa13.17□□□□□ -0.3
NFKB1-209ENST00000510638 FAM50AQ14320 339 aaKnown RBP13.17□□□□□ -0.3
NFKB1-209ENST00000510638 ZNF777Q9ULD5 760 aaPredicted RBP13.17□□□□□ -0.3
NFKB1-209ENST00000510638 DMRT2Q9Y5R5 561 aa13.17□□□□□ -0.3
NFKB1-209ENST00000510638 ARHGAP5Q13017 1502 aa13.16□□□□□ -0.3
NFKB1-209ENST00000510638 FRMPD1Q5SYB0 1578 aa13.15□□□□□ -0.3
NFKB1-209ENST00000510638 RRBP1Q9P2E9 1410 aaKnown RBP13.15□□□□□ -0.3
NFKB1-209ENST00000510638 TRIM26Q12899 539 aaPredicted RBP13.15□□□□□ -0.3
NFKB1-209ENST00000510638 ITSN2Q9NZM3 1697 aa13.14□□□□□ -0.31
NFKB1-209ENST00000510638 POGZQ7Z3K3 1410 aa13.13□□□□□ -0.31
NFKB1-209ENST00000510638 YEATS2Q9ULM3 1422 aa13.13□□□□□ -0.31
NFKB1-209ENST00000510638 FANCAO15360 1455 aa13.13□□□□□ -0.31
NFKB1-209ENST00000510638 NEO1Q92859 1461 aa13.13□□□□□ -0.31
NFKB1-209ENST00000510638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.13□□□□□ -0.31
NFKB1-209ENST00000510638 RICTORQ6R327 1708 aa13.13□□□□□ -0.31
NFKB1-209ENST00000510638 ARID4BQ4LE39 1312 aaPredicted RBP13.13□□□□□ -0.31
NFKB1-209ENST00000510638 PLEKHH2Q8IVE3 1493 aa13.12□□□□□ -0.31
NFKB1-209ENST00000510638 PREX2Q70Z35 1606 aa13.11□□□□□ -0.31
NFKB1-209ENST00000510638 RSPH4AQ5TD94 716 aa13.11□□□□□ -0.31
NFKB1-209ENST00000510638 ZNF644Q9H582 1327 aaPredicted RBP13.11□□□□□ -0.31
NFKB1-209ENST00000510638 POTEDQ86YR6 584 aa13.1□□□□□ -0.31
NFKB1-209ENST00000510638 MYO5CQ9NQX4 1742 aa13.1□□□□□ -0.31
NFKB1-209ENST00000510638 TCOF1Q13428 1488 aaKnown RBP13.1□□□□□ -0.31
NFKB1-209ENST00000510638 AKNAQ7Z591 1439 aa13.09□□□□□ -0.31
NFKB1-209ENST00000510638 KIAA1107Q9UPP5 1409 aa13.09□□□□□ -0.31
NFKB1-209ENST00000510638 CAMSAP2Q08AD1 1489 aa13.09□□□□□ -0.31
NFKB1-209ENST00000510638 LTBP4Q8N2S1 1624 aa13.08□□□□□ -0.32
NFKB1-209ENST00000510638 PTPN23Q9H3S7 1636 aa13.08□□□□□ -0.32
NFKB1-209ENST00000510638 CFAP74Q9C0B2 1584 aa13.07□□□□□ -0.32
NFKB1-209ENST00000510638 PTPRTO14522 1441 aa13.07□□□□□ -0.32
NFKB1-209ENST00000510638 ITGAEP38570 1179 aa13.07□□□□□ -0.32
NFKB1-209ENST00000510638 HNRNPMP52272 730 aaKnown RBP eCLIP13.07□□□□□ -0.32
NFKB1-209ENST00000510638 CDC42BPAQ5VT25 1732 aa13.07□□□□□ -0.32
NFKB1-209ENST00000510638 SCAPERQ9BY12 1400 aa13.06□□□□□ -0.32
NFKB1-209ENST00000510638 TSPY4P0CV99 314 aa13.06□□□□□ -0.32
NFKB1-209ENST00000510638 TSPY10P0CW01 314 aa13.06□□□□□ -0.32
NFKB1-209ENST00000510638 SIGLEC1Q9BZZ2 1709 aa13.05□□□□□ -0.32
NFKB1-209ENST00000510638 MED1Q15648 1581 aaPredicted RBP13.05□□□□□ -0.32
NFKB1-209ENST00000510638 SAMD9LQ8IVG5 1584 aa13.04□□□□□ -0.32
NFKB1-209ENST00000510638 CDC42BPBQ9Y5S2 1711 aa13.04□□□□□ -0.32
NFKB1-209ENST00000510638 DENND4BO75064 1496 aaPredicted RBP13.04□□□□□ -0.32
NFKB1-209ENST00000510638 ABCC1P33527 1531 aa13.03□□□□□ -0.32
NFKB1-209ENST00000510638 ZMYM4Q5VZL5 1548 aa13.03□□□□□ -0.32
NFKB1-209ENST00000510638 MSH5O43196 834 aa13.03□□□□□ -0.32
NFKB1-209ENST00000510638 CCDC141Q6ZP82 1450 aa13.03□□□□□ -0.32
NFKB1-209ENST00000510638 SYCP2Q9BX26 1530 aa13.03□□□□□ -0.32
NFKB1-209ENST00000510638 RAPGEF3O95398 923 aa13.02□□□□□ -0.33
NFKB1-209ENST00000510638 DAPK1P53355 1430 aa13.02□□□□□ -0.33
NFKB1-209ENST00000510638 MBD5Q9P267 1494 aa13.02□□□□□ -0.33
NFKB1-209ENST00000510638 PCGF6Q9BYE7 350 aa13.01□□□□□ -0.33
NFKB1-209ENST00000510638 MYT1LQ9UL68 1186 aa13.01□□□□□ -0.33
NFKB1-209ENST00000510638 ABCC5O15440 1437 aa13.01□□□□□ -0.33
NFKB1-209ENST00000510638 ZNF518AQ6AHZ1 1483 aa13.01□□□□□ -0.33
NFKB1-209ENST00000510638 ARHGEF5Q12774 1597 aa13□□□□□ -0.33
NFKB1-209ENST00000510638 TRAPPC8Q9Y2L5 1435 aa13□□□□□ -0.33
NFKB1-209ENST00000510638 SPAG9O60271 1321 aaKnown RBP13□□□□□ -0.33
NFKB1-209ENST00000510638 AFAP1Q8N556 730 aa13□□□□□ -0.33
NFKB1-209ENST00000510638 ZFYVE16Q7Z3T8 1539 aa12.99□□□□□ -0.33
NFKB1-209ENST00000510638 ARHGEF12Q9NZN5 1544 aa12.99□□□□□ -0.33
NFKB1-209ENST00000510638 CHIC2Q9UKJ5 165 aa12.99□□□□□ -0.33
NFKB1-209ENST00000510638 SHANK2Q9UPX8 1470 aa12.98□□□□□ -0.33
NFKB1-209ENST00000510638 C9orf84Q5VXU9 1444 aa12.98□□□□□ -0.33
NFKB1-209ENST00000510638 UHRF1BP1Q6BDS2 1440 aa12.98□□□□□ -0.33
NFKB1-209ENST00000510638 DNMT1P26358 1616 aaKnown RBP12.98□□□□□ -0.33
NFKB1-209ENST00000510638 MAGI2Q86UL8 1455 aa12.97□□□□□ -0.33
NFKB1-209ENST00000510638 ANKRD30AQ9BXX3 1397 aa12.97□□□□□ -0.33
NFKB1-209ENST00000510638 ROCK1Q13464 1354 aa12.96□□□□□ -0.33
NFKB1-209ENST00000510638 RTEL1-TNFRSF6BF6WH68 1400 aa12.96□□□□□ -0.34
NFKB1-209ENST00000510638 PLPPR3Q6T4P5 718 aa12.95□□□□□ -0.34
NFKB1-209ENST00000510638 PTPRKQ15262 1439 aa12.95□□□□□ -0.34
NFKB1-209ENST00000510638 RRP7BPQ9NSQ0 103 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms