RNA–Protein interactions for RNA: ENST00000509914.5

APBB3-214, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 1 (best)

Gene APBB3, Length 2,020 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-214ENST00000509914 MYO5CQ9NQX4 1742 aa24.12■■□□□ 1.45
APBB3-214ENST00000509914 CDC42BPBQ9Y5S2 1711 aa24.12■■□□□ 1.45
APBB3-214ENST00000509914 ZNF644Q9H582 1327 aaPredicted RBP24.11■■□□□ 1.45
APBB3-214ENST00000509914 MAP3K4Q9Y6R4 1608 aa24.1■■□□□ 1.45
APBB3-214ENST00000509914 ARHGAP5Q13017 1502 aa24.09■■□□□ 1.45
APBB3-214ENST00000509914 ARAP3Q8WWN8 1544 aa24.09■■□□□ 1.45
APBB3-214ENST00000509914 PTPN23Q9H3S7 1636 aa24.09■■□□□ 1.45
APBB3-214ENST00000509914 TCOF1Q13428 1488 aaKnown RBP24.08■■□□□ 1.45
APBB3-214ENST00000509914 ZNF777Q9ULD5 760 aaPredicted RBP24.08■■□□□ 1.45
APBB3-214ENST00000509914 KIF13AQ9H1H9 1805 aa24.08■■□□□ 1.45
APBB3-214ENST00000509914 FAM50AQ14320 339 aaKnown RBP24.06■■□□□ 1.44
APBB3-214ENST00000509914 EFCAB2Q5VUJ9 269 aa24.06■■□□□ 1.44
APBB3-214ENST00000509914 PELP1Q8IZL8 1130 aaKnown RBP24.05■■□□□ 1.44
APBB3-214ENST00000509914 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.04■■□□□ 1.44
APBB3-214ENST00000509914 CAMSAP2Q08AD1 1489 aa24.04■■□□□ 1.44
APBB3-214ENST00000509914 FANCAO15360 1455 aa24.03■■□□□ 1.44
APBB3-214ENST00000509914 SAMD9LQ8IVG5 1584 aa24.03■■□□□ 1.44
APBB3-214ENST00000509914 TRHP20396 242 aaPredicted RBP24■■□□□ 1.43
APBB3-214ENST00000509914 PPRC1Q5VV67 1664 aaKnown RBP23.98■■□□□ 1.43
APBB3-214ENST00000509914 AKNAQ7Z591 1439 aa23.97■■□□□ 1.43
APBB3-214ENST00000509914 HNRNPMP52272 730 aaKnown RBP eCLIP23.96■■□□□ 1.43
APBB3-214ENST00000509914 ARHGEF12Q9NZN5 1544 aa23.96■■□□□ 1.43
APBB3-214ENST00000509914 KIAA1107Q9UPP5 1409 aa23.95■■□□□ 1.43
APBB3-214ENST00000509914 MBD5Q9P267 1494 aa23.95■■□□□ 1.42
APBB3-214ENST00000509914 NEO1Q92859 1461 aa23.95■■□□□ 1.42
APBB3-214ENST00000509914 ABCC1P33527 1531 aa23.95■■□□□ 1.42
APBB3-214ENST00000509914 PLEKHH2Q8IVE3 1493 aa23.94■■□□□ 1.42
APBB3-214ENST00000509914 ITGAEP38570 1179 aa23.94■■□□□ 1.42
APBB3-214ENST00000509914 SYCP2Q9BX26 1530 aa23.94■■□□□ 1.42
APBB3-214ENST00000509914 TSPOAP1O95153 1857 aa23.93■■□□□ 1.42
APBB3-214ENST00000509914 CFAP74Q9C0B2 1584 aa23.93■■□□□ 1.42
APBB3-214ENST00000509914 ABCC5O15440 1437 aa23.92■■□□□ 1.42
APBB3-214ENST00000509914 ADGRL1O94910 1474 aa23.91■■□□□ 1.42
APBB3-214ENST00000509914 TEX14Q8IWB6 1497 aa23.91■■□□□ 1.42
APBB3-214ENST00000509914 PTPRKQ15262 1439 aa23.91■■□□□ 1.42
APBB3-214ENST00000509914 DAPK1P53355 1430 aa23.9■■□□□ 1.42
APBB3-214ENST00000509914 SCAPERQ9BY12 1400 aa23.9■■□□□ 1.42
APBB3-214ENST00000509914 DNMT1P26358 1616 aaKnown RBP23.89■■□□□ 1.42
APBB3-214ENST00000509914 ARHGEF5Q12774 1597 aa23.88■■□□□ 1.41
APBB3-214ENST00000509914 TRAPPC8Q9Y2L5 1435 aa23.88■■□□□ 1.41
APBB3-214ENST00000509914 ZEB1P37275 1124 aaPredicted RBP23.86■■□□□ 1.41
APBB3-214ENST00000509914 RSPH4AQ5TD94 716 aa23.86■■□□□ 1.41
APBB3-214ENST00000509914 CCDC141Q6ZP82 1450 aa23.85■■□□□ 1.41
APBB3-214ENST00000509914 AFAP1Q8N556 730 aa23.84■■□□□ 1.41
APBB3-214ENST00000509914 CHIC2Q9UKJ5 165 aa23.82■■□□□ 1.4
APBB3-214ENST00000509914 POGZQ7Z3K3 1410 aa23.81■■□□□ 1.4
APBB3-214ENST00000509914 DENND4BO75064 1496 aaPredicted RBP23.81■■□□□ 1.4
APBB3-214ENST00000509914 CROCC2H7BZ55 1655 aa23.8■■□□□ 1.4
APBB3-214ENST00000509914 RAPGEF3O95398 923 aa23.79■■□□□ 1.4
APBB3-214ENST00000509914 TSPY4P0CV99 314 aa23.79■■□□□ 1.4
APBB3-214ENST00000509914 TSPY10P0CW01 314 aa23.79■■□□□ 1.4
APBB3-214ENST00000509914 SHANK2Q9UPX8 1470 aa23.79■■□□□ 1.4
APBB3-214ENST00000509914 COL17A1Q9UMD9 1497 aaPredicted RBP23.78■■□□□ 1.4
APBB3-214ENST00000509914 C9orf84Q5VXU9 1444 aa23.78■■□□□ 1.4
APBB3-214ENST00000509914 ZNF518AQ6AHZ1 1483 aa23.77■■□□□ 1.4
APBB3-214ENST00000509914 SPAG9O60271 1321 aaKnown RBP23.74■■□□□ 1.39
APBB3-214ENST00000509914 KDM5CP41229 1560 aa23.74■■□□□ 1.39
APBB3-214ENST00000509914 FRMPD1Q5SYB0 1578 aa23.74■■□□□ 1.39
APBB3-214ENST00000509914 MAST1Q9Y2H9 1570 aa23.74■■□□□ 1.39
APBB3-214ENST00000509914 ADGRL2O95490 1459 aa23.74■■□□□ 1.39
APBB3-214ENST00000509914 ROCK1Q13464 1354 aa23.73■■□□□ 1.39
APBB3-214ENST00000509914 RICTORQ6R327 1708 aa23.73■■□□□ 1.39
APBB3-214ENST00000509914 NCOA1Q15788 1441 aa23.72■■□□□ 1.39
APBB3-214ENST00000509914 RRP7BPQ9NSQ0 103 aa23.72■■□□□ 1.39
APBB3-214ENST00000509914 RTEL1-TNFRSF6BF6WH68 1400 aa23.71■■□□□ 1.39
APBB3-214ENST00000509914 ZFYVE16Q7Z3T8 1539 aa23.7■■□□□ 1.38
APBB3-214ENST00000509914 ANKRD30AQ9BXX3 1397 aa23.69■■□□□ 1.38
APBB3-214ENST00000509914 HFM1A2PYH4 1435 aa23.68■■□□□ 1.38
APBB3-214ENST00000509914 INO80Q9ULG1 1556 aaPredicted RBP23.68■■□□□ 1.38
APBB3-214ENST00000509914 MLH3Q9UHC1 1453 aa23.68■■□□□ 1.38
APBB3-214ENST00000509914 NAIPQ13075 1403 aa23.68■■□□□ 1.38
APBB3-214ENST00000509914 ADGBQ8N7X0 1667 aa23.68■■□□□ 1.38
APBB3-214ENST00000509914 ATP7AQ04656 1500 aa23.67■■□□□ 1.38
APBB3-214ENST00000509914 ZMYM4Q5VZL5 1548 aa23.65■■□□□ 1.38
APBB3-214ENST00000509914 KIDINS220Q9ULH0 1771 aa23.64■■□□□ 1.38
APBB3-214ENST00000509914 HECW2Q9P2P5 1572 aa23.64■■□□□ 1.37
APBB3-214ENST00000509914 KIF15Q9NS87 1388 aa23.64■■□□□ 1.37
APBB3-214ENST00000509914 MYT1LQ9UL68 1186 aa23.64■■□□□ 1.37
APBB3-214ENST00000509914 PLXNC1O60486 1568 aa23.63■■□□□ 1.37
APBB3-214ENST00000509914 SETD5Q9C0A6 1442 aa23.63■■□□□ 1.37
APBB3-214ENST00000509914 KDM6BO15054 1643 aa23.61■■□□□ 1.37
APBB3-214ENST00000509914 YEATS2Q9ULM3 1422 aa23.6■■□□□ 1.37
APBB3-214ENST00000509914 MAGI2Q86UL8 1455 aa23.59■■□□□ 1.37
APBB3-214ENST00000509914 RAB3GAP2Q9H2M9 1393 aa23.59■■□□□ 1.37
APBB3-214ENST00000509914 GCC2Q8IWJ2 1684 aa23.58■■□□□ 1.37
APBB3-214ENST00000509914 ABCA6Q8N139 1617 aa23.56■■□□□ 1.36
APBB3-214ENST00000509914 ANKRD50Q9ULJ7 1429 aa23.56■■□□□ 1.36
APBB3-214ENST00000509914 DUOX2Q9NRD8 1548 aa23.56■■□□□ 1.36
APBB3-214ENST00000509914 DIP2CQ9Y2E4 1556 aa23.55■■□□□ 1.36
APBB3-214ENST00000509914 DHX29Q7Z478 1369 aaKnown RBP23.53■■□□□ 1.36
APBB3-214ENST00000509914 A2MP01023 1474 aa23.52■■□□□ 1.36
APBB3-214ENST00000509914 ERBINQ96RT1 1412 aa23.5■■□□□ 1.35
APBB3-214ENST00000509914 ATP10AO60312 1499 aa23.48■■□□□ 1.35
APBB3-214ENST00000509914 ARHGEF40Q8TER5 1519 aa23.48■■□□□ 1.35
APBB3-214ENST00000509914 REREQ9P2R6 1566 aa23.42■■□□□ 1.34
APBB3-214ENST00000509914 KIF3BO15066 747 aa23.42■■□□□ 1.34
APBB3-214ENST00000509914 SCAF1Q9H7N4 1312 aaKnown RBP23.4■■□□□ 1.34
APBB3-214ENST00000509914 EIF2AK4Q9P2K8 1649 aaKnown RBP23.4■■□□□ 1.34
APBB3-214ENST00000509914 TRIM52Q96A61 297 aa23.39■■□□□ 1.34
APBB3-214ENST00000509914 SIGLEC1Q9BZZ2 1709 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms