RNA–Protein interactions for RNA: ENST00000508679.5

CALCOCO2-211, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-211ENST00000508679 FANCAO15360 1455 aa23.42■■□□□ 1.34
CALCOCO2-211ENST00000508679 CFAP74Q9C0B2 1584 aa23.42■■□□□ 1.34
CALCOCO2-211ENST00000508679 SAMD9LQ8IVG5 1584 aa23.4■■□□□ 1.34
CALCOCO2-211ENST00000508679 PHLDB1Q86UU1 1377 aa23.4■■□□□ 1.34
CALCOCO2-211ENST00000508679 CCNB3Q8WWL7 1395 aa23.4■■□□□ 1.34
CALCOCO2-211ENST00000508679 ARHGAP5Q13017 1502 aa23.39■■□□□ 1.33
CALCOCO2-211ENST00000508679 AKNAQ7Z591 1439 aa23.38■■□□□ 1.33
CALCOCO2-211ENST00000508679 MYOM3Q5VTT5 1437 aa23.36■■□□□ 1.33
CALCOCO2-211ENST00000508679 FRMPD1Q5SYB0 1578 aa23.35■■□□□ 1.33
CALCOCO2-211ENST00000508679 RICTORQ6R327 1708 aa23.34■■□□□ 1.33
CALCOCO2-211ENST00000508679 ABCC1P33527 1531 aa23.34■■□□□ 1.33
CALCOCO2-211ENST00000508679 ARHGEF12Q9NZN5 1544 aa23.34■■□□□ 1.33
CALCOCO2-211ENST00000508679 EFCAB2Q5VUJ9 269 aa23.34■■□□□ 1.33
CALCOCO2-211ENST00000508679 KDM6BO15054 1643 aa23.33■■□□□ 1.33
CALCOCO2-211ENST00000508679 MIA2Q96PC5 1412 aa23.31■■□□□ 1.32
CALCOCO2-211ENST00000508679 PPARGC1BQ86YN6 1023 aaKnown RBP23.3■■□□□ 1.32
CALCOCO2-211ENST00000508679 ADGRL1O94910 1474 aa23.3■■□□□ 1.32
CALCOCO2-211ENST00000508679 CFDP1Q9UEE9 299 aaPredicted RBP23.29■■□□□ 1.32
CALCOCO2-211ENST00000508679 ZNF644Q9H582 1327 aaPredicted RBP23.28■■□□□ 1.32
CALCOCO2-211ENST00000508679 KIAA1107Q9UPP5 1409 aa23.27■■□□□ 1.32
CALCOCO2-211ENST00000508679 MBD5Q9P267 1494 aa23.27■■□□□ 1.32
CALCOCO2-211ENST00000508679 FGD6Q6ZV73 1430 aa23.26■■□□□ 1.31
CALCOCO2-211ENST00000508679 SCAPERQ9BY12 1400 aa23.26■■□□□ 1.31
CALCOCO2-211ENST00000508679 CAMSAP2Q08AD1 1489 aa23.26■■□□□ 1.31
CALCOCO2-211ENST00000508679 TCOF1Q13428 1488 aaKnown RBP23.26■■□□□ 1.31
CALCOCO2-211ENST00000508679 PTPN23Q9H3S7 1636 aa23.25■■□□□ 1.31
CALCOCO2-211ENST00000508679 SYCP2Q9BX26 1530 aa23.25■■□□□ 1.31
CALCOCO2-211ENST00000508679 KDM5CP41229 1560 aa23.24■■□□□ 1.31
CALCOCO2-211ENST00000508679 POGZQ7Z3K3 1410 aa23.24■■□□□ 1.31
CALCOCO2-211ENST00000508679 DENND4BO75064 1496 aaPredicted RBP23.24■■□□□ 1.31
CALCOCO2-211ENST00000508679 TRAPPC8Q9Y2L5 1435 aa23.23■■□□□ 1.31
CALCOCO2-211ENST00000508679 PLEKHH2Q8IVE3 1493 aa23.23■■□□□ 1.31
CALCOCO2-211ENST00000508679 ZMYM4Q5VZL5 1548 aa23.22■■□□□ 1.31
CALCOCO2-211ENST00000508679 ARHGEF5Q12774 1597 aa23.21■■□□□ 1.31
CALCOCO2-211ENST00000508679 RAPGEF3O95398 923 aa23.2■■□□□ 1.3
CALCOCO2-211ENST00000508679 ZNF777Q9ULD5 760 aaPredicted RBP23.19■■□□□ 1.3
CALCOCO2-211ENST00000508679 ZNF518AQ6AHZ1 1483 aa23.17■■□□□ 1.3
CALCOCO2-211ENST00000508679 RRBP1Q9P2E9 1410 aaKnown RBP23.16■■□□□ 1.3
CALCOCO2-211ENST00000508679 HNRNPMP52272 730 aaKnown RBP eCLIP23.16■■□□□ 1.3
CALCOCO2-211ENST00000508679 KIDINS220Q9ULH0 1771 aa23.15■■□□□ 1.3
CALCOCO2-211ENST00000508679 AFAP1Q8N556 730 aa23.14■■□□□ 1.3
CALCOCO2-211ENST00000508679 DNMT1P26358 1616 aaKnown RBP23.14■■□□□ 1.29
CALCOCO2-211ENST00000508679 CROCC2H7BZ55 1655 aa23.13■■□□□ 1.29
CALCOCO2-211ENST00000508679 INO80Q9ULG1 1556 aaPredicted RBP23.13■■□□□ 1.29
CALCOCO2-211ENST00000508679 MLH3Q9UHC1 1453 aa23.12■■□□□ 1.29
CALCOCO2-211ENST00000508679 HECW2Q9P2P5 1572 aa23.11■■□□□ 1.29
CALCOCO2-211ENST00000508679 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.11■■□□□ 1.29
CALCOCO2-211ENST00000508679 CCDC141Q6ZP82 1450 aa23.11■■□□□ 1.29
CALCOCO2-211ENST00000508679 MAGI2Q86UL8 1455 aa23.1■■□□□ 1.29
CALCOCO2-211ENST00000508679 MAST1Q9Y2H9 1570 aa23.1■■□□□ 1.29
CALCOCO2-211ENST00000508679 ABCC5O15440 1437 aa23.09■■□□□ 1.29
CALCOCO2-211ENST00000508679 ZFYVE16Q7Z3T8 1539 aa23.08■■□□□ 1.29
CALCOCO2-211ENST00000508679 YEATS2Q9ULM3 1422 aa23.07■■□□□ 1.28
CALCOCO2-211ENST00000508679 ARHGEF40Q8TER5 1519 aa23.07■■□□□ 1.28
CALCOCO2-211ENST00000508679 ABCA6Q8N139 1617 aa23.07■■□□□ 1.28
CALCOCO2-211ENST00000508679 RSPH4AQ5TD94 716 aa23.07■■□□□ 1.28
CALCOCO2-211ENST00000508679 SIGLEC1Q9BZZ2 1709 aa23.06■■□□□ 1.28
CALCOCO2-211ENST00000508679 DAPK1P53355 1430 aa23.06■■□□□ 1.28
CALCOCO2-211ENST00000508679 DIP2CQ9Y2E4 1556 aa23.05■■□□□ 1.28
CALCOCO2-211ENST00000508679 ATP7AQ04656 1500 aa23.05■■□□□ 1.28
CALCOCO2-211ENST00000508679 RTEL1-TNFRSF6BF6WH68 1400 aa23.05■■□□□ 1.28
CALCOCO2-211ENST00000508679 PTPRKQ15262 1439 aa23.04■■□□□ 1.28
CALCOCO2-211ENST00000508679 SHANK2Q9UPX8 1470 aa23.04■■□□□ 1.28
CALCOCO2-211ENST00000508679 ADGBQ8N7X0 1667 aa23.02■■□□□ 1.28
CALCOCO2-211ENST00000508679 REREQ9P2R6 1566 aa23■■□□□ 1.27
CALCOCO2-211ENST00000508679 SPAG9O60271 1321 aaKnown RBP22.99■■□□□ 1.27
CALCOCO2-211ENST00000508679 PLXNC1O60486 1568 aa22.98■■□□□ 1.27
CALCOCO2-211ENST00000508679 C9orf84Q5VXU9 1444 aa22.97■■□□□ 1.27
CALCOCO2-211ENST00000508679 FAM50AQ14320 339 aaKnown RBP22.97■■□□□ 1.27
CALCOCO2-211ENST00000508679 ADGRL2O95490 1459 aa22.96■■□□□ 1.27
CALCOCO2-211ENST00000508679 ATP10AO60312 1499 aa22.96■■□□□ 1.27
CALCOCO2-211ENST00000508679 TSPY4P0CV99 314 aa22.91■■□□□ 1.26
CALCOCO2-211ENST00000508679 TSPY10P0CW01 314 aa22.91■■□□□ 1.26
CALCOCO2-211ENST00000508679 NCOA1Q15788 1441 aa22.91■■□□□ 1.26
CALCOCO2-211ENST00000508679 BCORL1Q5H9F3 1711 aa22.9■■□□□ 1.26
CALCOCO2-211ENST00000508679 AGLP35573 1532 aa22.89■■□□□ 1.26
CALCOCO2-211ENST00000508679 A2MP01023 1474 aa22.88■■□□□ 1.25
CALCOCO2-211ENST00000508679 ROCK1Q13464 1354 aa22.86■■□□□ 1.25
CALCOCO2-211ENST00000508679 DHX29Q7Z478 1369 aaKnown RBP22.85■■□□□ 1.25
CALCOCO2-211ENST00000508679 CHIC2Q9UKJ5 165 aa22.84■■□□□ 1.25
CALCOCO2-211ENST00000508679 DUOX2Q9NRD8 1548 aa22.83■■□□□ 1.25
CALCOCO2-211ENST00000508679 EIF2AK4Q9P2K8 1649 aaKnown RBP22.82■■□□□ 1.24
CALCOCO2-211ENST00000508679 ANKRD30AQ9BXX3 1397 aa22.81■■□□□ 1.24
CALCOCO2-211ENST00000508679 KIF15Q9NS87 1388 aa22.81■■□□□ 1.24
CALCOCO2-211ENST00000508679 ADAMTSL3P82987 1691 aa22.8■■□□□ 1.24
CALCOCO2-211ENST00000508679 MYT1LQ9UL68 1186 aa22.79■■□□□ 1.24
CALCOCO2-211ENST00000508679 GCC2Q8IWJ2 1684 aa22.78■■□□□ 1.24
CALCOCO2-211ENST00000508679 ITGAEP38570 1179 aa22.77■■□□□ 1.24
CALCOCO2-211ENST00000508679 RRP7BPQ9NSQ0 103 aa22.77■■□□□ 1.24
CALCOCO2-211ENST00000508679 MROH1Q8NDA8 1641 aa22.77■■□□□ 1.24
CALCOCO2-211ENST00000508679 RNF17Q9BXT8 1623 aaKnown RBP22.77■■□□□ 1.24
CALCOCO2-211ENST00000508679 ERBINQ96RT1 1412 aa22.77■■□□□ 1.24
CALCOCO2-211ENST00000508679 DEPDC5O75140 1603 aa22.76■■□□□ 1.23
CALCOCO2-211ENST00000508679 NAIPQ13075 1403 aa22.75■■□□□ 1.23
CALCOCO2-211ENST00000508679 HFM1A2PYH4 1435 aa22.73■■□□□ 1.23
CALCOCO2-211ENST00000508679 ANKRD50Q9ULJ7 1429 aa22.71■■□□□ 1.23
CALCOCO2-211ENST00000508679 KDM4FA0A1W2PPD8 638 aa22.69■■□□□ 1.22
CALCOCO2-211ENST00000508679 MADDQ8WXG6 1647 aa22.69■■□□□ 1.22
CALCOCO2-211ENST00000508679 VWDEQ8N2E2 1590 aa22.68■■□□□ 1.22
CALCOCO2-211ENST00000508679 PRDM15P57071 1507 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms